Factsheet for Bra029193.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38846	Canola	plastid	98.3	99.57
CDY32646	Canola	plastid	96.82	97.75
AT5G51070.1	Thale cress	plastid	91.83	91.64
GSMUA_Achr6P23780_001	Banana	cytosol	60.87	67.93
VIT_19s0014g00020.t01	Wine grape	plastid	67.76	67.55
Solyc03g117950.2.1	Tomato	nucleus	67.66	66.18
PGSC0003DMT400036893	Potato	plastid	67.55	66.01
OQU81478	Sorghum	cytosol	58.75	65.1
HORVU5Hr1G081860.1	Barley	cytosol	52.7	65.05
HORVU2Hr1G072020.5	Barley	plastid	56.52	63.91
Os02t0526400-01	Rice	cytosol, plasma membrane	55.46	63.63
KRH63903	Soybean	plastid	62.88	62.69
KRH54048	Soybean	plastid	62.88	62.42
Zm00001d003847_P001	Maize	plastid	61.19	61.91
TraesCS5B01G321800.1	Wheat	plastid	59.6	60.63
TraesCS2B01G307500.1	Wheat	plastid	60.55	60.49
TraesCS5A01G321300.1	Wheat	plastid	59.28	60.37
TraesCS2D01G289100.1	Wheat	plastid	60.55	60.36
TraesCS2A01G291100.1	Wheat	plastid	60.55	60.36
TraesCS5D01G328100.1	Wheat	plastid	59.38	60.22
EES05165	Sorghum	plastid	60.23	59.35
Zm00001d016664_P001	Maize	plastid	59.49	59.24
GSMUA_Achr10P...	Banana	plastid	58.32	55.5
Bra018030.1-P	Field mustard	mitochondrion	42.1	44.71
Bra029922.1-P	Field mustard	mitochondrion	42.74	43.43
Bra022751.1-P	Field mustard	plastid	42.74	43.38
Bra032044.1-P	Field mustard	mitochondrion	31.71	37.66
Bra023518.1-P	Field mustard	plastid	37.22	36.45
Bra003807.1-P	Field mustard	nucleus	33.93	36.28
Bra015922.1-P	Field mustard	nucleus	34.89	36.11
Bra008698.1-P	Field mustard	plastid	36.69	35.56
Bra007816.1-P	Field mustard	mitochondrion	36.48	35.32

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.5	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra029193	EnsemblPlants:Bra029193.1	EnsemblPlants:Bra029193.1-P	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2
InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016887	GO:GO:0019538	GO:GO:0034214	GO:GO:0034605	GO:GO:0042803	GO:GO:1901002
GO:GO:1902584	InterPro:IPR036628	UniProt:M4EK76	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02861
PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871	PANTHER:PTHR43572
PANTHER:PTHR43572:SF20	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	SUPFAM:SSF81923	UniParc:UPI0002540165
SEG:seg	:	:	:	:	:

Description

AT5G51070 (E=0.0) ERD1, CLPD | ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding

Coordinates

chrA03:-:6783239..6787686

Molecular Weight (calculated)

103211.0 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.248

Length

943 amino acids

Sequence
(BLAST)

001: MEVLSTSSPL TLHTRRLPSS SSSPVTSFAA SSLSSFSSSY LGISLSNRRT IHRLSTTPTN SRRFPRKKRN KLTPISAVFE RFTERAIRAI IFSQKEAKSL
101: GKDMVYPQHL LLGLIAEDRD PQGFLGSGVT VDKAREAVSS IWDKANSDDS GLSESSSSSS YSRSTDMPFS ISTKRVFEAA VEYSRTLECQ YIAPEHIAVG
201: LFTVDDGSAG KVLKRLGANM NLLTAAALTR LKGEIAKDGR EPPSSKDASP NGRVGGPGSA GRTKEKSVLE QFCVDLTARA SEGLIDPVIG REKEVQRVIQ
301: ILCRRTKNNP ILLGEAGVGK TAIAEGLAIS IAEANAPGFL LTKRIMSLDI GLLMAGAKER GELESRVTAL ISEVKKSGKV ILFIDEVHTL IGSGTVGRGN
401: KGSGLDIANL LKPPLGRGEL QCIASTTLDE FRSQFEKDKA LARRFQPVLI DEPSEEDAVK ILIGLREKYE AHHNCKYTME AIDAAVYLSS RYIADRFLPD
501: KAIDLIDEAG SRARIQAFRK KKEDAICILS KPPDDYWQEI RTVQAMHEVV LSSRPNQEDG NNIVDESTEL VEESSLPPAA GNDEPIEVGP DDIAAVASAW
601: SGIPVQQITA DERMLLMGLE DELRNRVVGQ DEAVAAISRA VKRSRVGLKD PDRPIAAMLF CGPTGVGKTE LTKALAANYF GSEESMLRLD MSEYMERHTV
701: SKLIGSPPGY VGFEEGGMLT EAIRRRPFTV VLFDEIEKAH PDIFNILLQL FEDGHLTDSQ GRRVSFKNAL IIMTSNVGSS AIAKGRQRSI GFILDDDEEE
801: ASYSGMKALV VEELKNYFRP ELLNRIDEIV IFRQLEQAQM MEILNLMLQD LKSRLVALGV GLEVSEPVKE LICRQGYDPA YGARPLRRTV TEIVEDPLSE
901: AFLAGSFKPG DTAFVVLDDT GNPSVRTKPD SHNVRVTDKT SIA

Best Arabidopsis Sequence Match ( AT5G51070.1 )
(BLAST)

001: MEVLSTSSPL TLHSHRLLSA SSSSSHVTSI AASSLSSFAS SYLGISLSNR TIHRFSTTPT NLRRFPQRKR KKFTPISAVF ERFTERAIRA IIFSQKEAKS
101: LGKDMVYTQH LLLGLIAEDR DPQGFLGSGI TIDKAREAVW SIWDEANSDS KQEEASSTSY SKSTDMPFSI STKRVFEAAV EYSRTMDCQY IAPEHIAVGL
201: FTVDDGSAGR VLKRLGANMN LLTAAALTRL KGEIAKDGRE PSSSSKGSFE SPPSGRIAGS GPGGKKAKNV LEQFCVDLTA RASEGLIDPV IGREKEVQRV
301: IQILCRRTKN NPILLGEAGV GKTAIAEGLA ISIAEASAPG FLLTKRIMSL DIGLLMAGAK ERGELEARVT ALISEVKKSG KVILFIDEVH TLIGSGTVGR
401: GNKGSGLDIA NLLKPSLGRG ELQCIASTTL DEFRSQFEKD KALARRFQPV LINEPSEEDA VKILLGLREK YEAHHNCKYT MEAIDAAVYL SSRYIADRFL
501: PDKAIDLIDE AGSRARIEAF RKKKEDAICI LSKPPNDYWQ EIKTVQAMHE VVLSSRQKQD DGDAISDESG ELVEESSLPP AAGDDEPILV GPDDIAAVAS
601: VWSGIPVQQI TADERMLLMS LEDQLRGRVV GQDEAVAAIS RAVKRSRVGL KDPDRPIAAM LFCGPTGVGK TELTKALAAN YFGSEESMLR LDMSEYMERH
701: TVSKLIGSPP GYVGFEEGGM LTEAIRRRPF TVVLFDEIEK AHPDIFNILL QLFEDGHLTD SQGRRVSFKN ALIIMTSNVG SLAIAKGRHG SIGFILDDDE
801: EAASYTGMKA LVVEELKNYF RPELLNRIDE IVIFRQLEKA QMMEILNLML QDLKSRLVAL GVGLEVSEPV KELICKQGYD PAYGARPLRR TVTEIVEDPL
901: SEAFLAGSFK PGDTAFVVLD DTGNPSVRTK PDSSTIRVTD KTSIA

Arabidopsis Description

CLPDChaperone protein ClpD, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42762]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.