Factsheet for Bra029922.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83052	Canola	mitochondrion	99.68	99.78
CDX68504	Canola	mitochondrion	99.46	99.46
Bra018030.1-P	Field mustard	mitochondrion	93.21	97.41
GSMUA_Achr6P08050_001	Banana	cytosol	13.04	95.28
AT3G48870.3	Thale cress	cytosol, plastid	92.24	89.92
GSMUA_Achr6P08040_001	Banana	cytosol	61.21	88.2
Os04t0397100-01	Rice	plastid	37.72	86.85
Bra022751.1-P	Field mustard	plastid	86.53	86.44
KRH54115	Soybean	plastid	85.24	85.79
Solyc12g042060.1.1	Tomato	plastid	85.13	85.59
KRH63851	Soybean	plastid	85.02	85.57
PGSC0003DMT400037527	Potato	cytosol	85.02	85.48
KRH59753	Soybean	endoplasmic reticulum	84.59	85.42
KRH41069	Soybean	mitochondrion, plastid	84.27	85.09
PGSC0003DMT400036961	Potato	plastid	84.48	84.76
GSMUA_Achr3P18630_001	Banana	plastid	82.33	84.61
Solyc03g118340.2.1	Tomato	nucleus	84.05	84.23
PGSC0003DMT400054236	Potato	plastid	82.11	83.74
TraesCS2D01G285800.1	Wheat	plastid	82.54	83.53
TraesCS2B01G304200.1	Wheat	golgi	82.54	83.53
TraesCS6D01G183600.2	Wheat	cytosol, plastid	82.44	83.52
KXG23307	Sorghum	plastid	82.87	83.5
HORVU2Hr1G071080.3	Barley	plastid	82.44	83.42
TraesCS6A01G195200.1	Wheat	plastid	82.22	83.3
Zm00001d003894_P004	Maize	plastid	82.65	83.28
Zm00001d024009_P001	Maize	plastid	82.54	83.17
Zm00001d025273_P019	Maize	plastid	82.54	83.17
Os12t0230100-01	Rice	plastid	82.33	83.13
TraesCS2A01G287300.2	Wheat	plastid	80.17	83.13
TraesCS6B01G233800.1	Wheat	plastid	82.0	83.08
EES12052	Sorghum	plastid	82.44	83.06
GSMUA_Achr6P16470_001	Banana	plastid	78.12	82.76
TraesCS5D01G118700.1	Wheat	plastid	81.25	81.96
TraesCS5A01G118900.1	Wheat	unclear	81.25	81.96
TraesCS5B01G112500.1	Wheat	plastid	81.03	81.74
VIT_17s0000g00340.t01	Wine grape	mitochondrion, plastid	85.45	80.84
GSMUA_Achr8P09160_001	Banana	plastid	80.39	80.74
HORVU5Hr1G031470.6	Barley	endoplasmic reticulum, golgi, mitochondrion, plastid	80.5	76.77
TraesCS4B01G082900.1	Wheat	mitochondrion	51.62	63.61
GSMUA_AchrUn_...	Banana	plastid	76.08	60.29
Bra032044.1-P	Field mustard	mitochondrion	36.64	42.82
Bra029193.1-P	Field mustard	plastid	43.43	42.74
Bra003807.1-P	Field mustard	nucleus	38.04	40.02
Bra023518.1-P	Field mustard	plastid	41.27	39.77
Bra015922.1-P	Field mustard	nucleus	38.79	39.52
Bra007816.1-P	Field mustard	mitochondrion	41.38	39.43
Bra008698.1-P	Field mustard	plastid	40.84	38.95

Protein Annotations

Gene3D:1.10.1780.10	Gene3D:1.10.8.60	MapMan:19.4.2.9.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra029922	EnsemblPlants:Bra029922.1	EnsemblPlants:Bra029922.1-P	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:ClpA/B_CS2
InterPro:Clp_ATPase_C	InterPro:Clp_N	InterPro:Clp_N_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152	GO:GO:0019538
InterPro:IPR001943	InterPro:IPR036628	UniProt:M4EMA2	InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF02151
PFAM:PF02861	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870	ScanProsite:PS00871
PFscan:PS50151	PANTHER:PTHR43572	PANTHER:PTHR43572:SF8	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540
SUPFAM:SSF81923	UniParc:UPI0002543F5D	InterPro:UVR_dom	SEG:seg	:	:

Description

AT3G48870 (E=0.0) ATCLPC, ATHSP93-III, HSP93-III | HSP93-III; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding

Coordinates

chrA01:-:14924107..14927549

Molecular Weight (calculated)

102924.0 Da

IEP (calculated)

6.586

GRAVY (calculated)

-0.313

Length

928 amino acids

Sequence
(BLAST)

001: MARLLANFTA RPLLGPGRHV QSDDYRKPRR CVKMMYTSQT PVLSIQSFSG LRAANAVDLI ARPAHGFFSK VNLQISSRKG KASRCVTKAM FERFTEKAIK
101: VIMLSQEEAR RLGHNFVGTE QILLGLIGEG TGIAAKVLKS MGINLKDSRV EVEKIIGRGS GFVAVEIPFT PRAKRVLELS LEEARQLGHN YIGSEHLLLG
201: LLREGEGVAA RVLENLGVDA SNIRTQVVRM VGENNEVTAS VGGGSSGNSK MPTLEEYGTN LTKLAEEGKL DPVVGRQPQI ERVVQILARR TKNNPCLIGE
301: PGVGKTAIAE GLAQRIASGD VPETIEGKTV ITLDMGLLVA GTKYRGEFEE RLKKLMEEIR QSDDIILFID EVHTLIGAGA AEGAIDAANI LKPALARGEL
401: QCIGATTLDE YRKHIEKDPA LERRFQPVKV PEPTVDEAIQ ILHGLRERYE IHHKLRYTDE ALVAAAQLSH QYISDRFLPD KAIDLIDEAG SRVRLRHAQV
501: PEEARELEKQ LRQITKEKNE AVRGQDFEKA GSHRDREIEL RAEIAAVLAK GKEVSKAETE AGEEGGPTVT ESDIQHIVST WTGIPVEKVS SDESSRLLKM
601: EQTLHTRVIG QDEAVKAISR AIRRARVGLK NPNRPIASFI FSGPTGVGKS ELAKALAAYY FGSEEAMIRL DMSEFMERHT VSKLIGSPPG YVGYTEGGQL
701: TEAVRRRPYT LVLFDEIEKA HPDVFNMMLQ ILEDGRLTDS KGRTVDFKNT LLIMTSNVGS SVIEKGGRRI GFDLDYDEKD SSYNRIKSLV TEELKQYFRP
801: EFLNRLDEMI VFRQLTKLEV KEIADIMLKE VVVRLKDKEI ELQVTERFKE RVVDEGFDPS YGARPLRRAI MRLLEDSMAE KMLSREIKDG DSVIVDVDAE
901: GSVVVLNGKS GGGGSFAEEA MEDPILVL

Best Arabidopsis Sequence Match ( AT3G48870.3 )
(BLAST)

001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

Arabidopsis Description

CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.