Factsheet for Bra032044.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53470	Canola	mitochondrion	98.99	99.12
Solyc06g011380.2.1	Tomato	cytosol, plastid	18.51	71.71
KRH52355	Soybean	cytosol, mitochondrion	54.53	66.51
Bra007816.1-P	Field mustard	mitochondrion	74.69	60.88
GSMUA_Achr9P22420_001	Banana	cytosol	65.87	59.23
KRH61688	Soybean	mitochondrion	68.77	56.06
VIT_04s0008g05870.t01	Wine grape	mitochondrion	67.76	55.93
HORVU6Hr1G028690.1	Barley	mitochondrion	66.62	53.76
Os02t0181900-01	Rice	mitochondrion	66.25	53.51
EES06386	Sorghum	mitochondrion	66.62	53.43
TraesCS6D01G135600.1	Wheat	golgi	66.5	53.28
TraesCS6A01G146400.1	Wheat	mitochondrion	66.5	53.28
TraesCS6B01G174500.1	Wheat	mitochondrion	66.25	53.08
Bra023518.1-P	Field mustard	plastid	59.95	49.43
Bra008698.1-P	Field mustard	plastid	59.82	48.82
Bra003807.1-P	Field mustard	nucleus	46.35	41.72
Bra015922.1-P	Field mustard	nucleus	46.73	40.72
Bra018030.1-P	Field mustard	mitochondrion	42.07	37.61
Bra022751.1-P	Field mustard	plastid	42.95	36.71
Bra029922.1-P	Field mustard	mitochondrion	42.82	36.64
Bra029193.1-P	Field mustard	plastid	37.66	31.71
Zm00001d008786_P001	Maize	plastid	5.79	25.84

Protein Annotations

Gene3D:1.10.8.60	MapMan:26.4.2.4	Gene3D:3.40.50.300	Gene3D:4.10.860.10	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_core
EnsemblPlantsGene:Bra032044	EnsemblPlants:Bra032044.1	EnsemblPlants:Bra032044.1-P	InterPro:ClpA/B	InterPro:ClpA/B_CS1	InterPro:Clp_ATPase_C
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	UniProt:M4ETB4
InterPro:P-loop_NTPase	PFAM:PF00004	PFAM:PF07724	PFAM:PF10431	PRINTS:PR00300	ScanProsite:PS00870
PANTHER:PTHR11638	PANTHER:PTHR11638:SF86	SMART:SM00382	SMART:SM01086	SUPFAM:SSF52540	UniParc:UPI0002544D40
SEG:seg	:	:	:	:	:

Description

AT2G25140 (E=1e-159) HSP98.7, CLPB-M, CLPB4 | CLPB4 (CASEIN LYTIC PROTEINASE B4); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding

Coordinates

chrA04:+:11271147..11274630

Molecular Weight (calculated)

88598.1 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.353

Length

794 amino acids

Sequence
(BLAST)

001: MAYRRLSKSV SAAIKVHNAL SRPSLLLRSR ALSASAHIIS STSFLRQPSS FIGAPRNGIT SATQEAPRGQ LLPLSLQLPF LRRFMSTDGD VSALKQYGTD
101: LTEMARQGKL PPLIGRDDEI KRCIQILCRM TKSNPVIIGE PGVGKTAIAE GLAQRIVKGE VPEPLLNRKV ISLDMGSLVA GTSYRGEFEE KLKAVVKEIT
201: ASNGKTLLFI DEIHTLVGAG ACEGDSMDAS NLLKPMLARG ELRCIGATTL SEYRKYIEKD PALERRFQQV FCGQPSVEDT VSILRGLRQR YEKHHGVKIS
301: DGSLVSAAVL SDRYITERFL PDKAIDLVDE AAAKLKMETT SKPTELEEVD KAVIKLEMEK LSLRKDTFKS SEAFFKKEKE MENDLTKLKD KQKELIKQWE
401: EDKSLITKLR SLREEIDVSS KREYSQNRTA ELKYGTLMSL QSQLDEAEKN LTKSGGSELP LLKEGVTDRH IAEIISKWTD VLHKKVIGQG KAVESIADAI
501: RCSKAGLSDP NRPIASFMFM GPTGVGKTEL AKALAGYLLN TDNAIVRIDM SEYMEKSNVS RLIGASPGFV GYEEGGQLTE AVRRRPYSVV LFDEIEKAHP
601: DVFNILLQLL DDGRVTDSQG KTVSFRNCFV IMTSNIGAQS ILDTFRGNED RKEAVYETMK QQVVELARKT FKPEFMNRID EYIVFQPLDT KEISKIVEIQ
701: MKRVKNRLEE NKIKLEYTQE AVDHLAQLGF DPNNGARPVK RVIEKIVKKE IANKVLKGEF AADDTILLDV DQTSNELVVI KKLESDAPVE EMAA

Best Arabidopsis Sequence Match ( AT2G25140.1 )
(BLAST)

001: MALRRLSKSV SSAIKAQYTL SRPSPLLRSR SLSSSPHYTS IGRPTNSFIG KINNSSITHA TTTHGQLFPL SSPRRFCTTT AQVNQNEFTE MAWEGLINAF
101: DAARESKQQI VESEHLMKAL LEQKDGMARK IFTKAGIDNS SVLQATDLFI SKQPTVSDAS GQRLGSSLSV ILENAKRHKK DMLDSYVSVE HFLLAYYSDT
201: RFGQEFFRDM KLDIQVLKDA IKDVRGDQRV TDRNPESKYQ ALEKYGNDLT EMARRGKLDP VIGRDDEIRR CIQILCRRTK NNPVIIGEPG VGKTAIAEGL
301: AQRIVRGDVP EPLMNRKLIS LDMGSLLAGA KFRGDFEERL KAVMKEVSAS NGQTILFIDE IHTVVGAGAM DGAMDASNLL KPMLGRGELR CIGATTLTEY
401: RKYIEKDPAL ERRFQQVLCV QPSVEDTISI LRGLRERYEL HHGVTISDSA LVSAAVLADR YITERFLPDK AIDLVDEAGA KLKMEITSKP TELDGIDRAV
501: IKLEMEKLSL KNDTDKASKE RLQKIENDLS TLKQKQKELN VQWEKEKSLM TKIRSFKEEI DRVNLEIESA EREYDLNRAA ELKYGTLLSL QRQLEEAEKN
601: LTNFRQFGQS LLREVVTDLD IAEIVSKWTG IPLSNLQQSE REKLVMLEEV LHHRVIGQDM AVKSVADAIR RSRAGLSDPN RPIASFMFMG PTGVGKTELA
701: KALAGYLFNT ENAIVRVDMS EYMEKHSVSR LVGAPPGYVG YEEGGQLTEV VRRRPYSVVL FDEIEKAHPD VFNILLQLLD DGRITDSQGR TVSFKNCVVI
801: MTSNIGSHHI LETLRNNEDS KEAVYEIMKR QVVELARQNF RPEFMNRIDE YIVFQPLDSN EISKIVELQM RRVKNSLEQK KIKLQYTKEA VDLLAQLGFD
901: PNYGARPVKR VIQQMVENEI AVGILKGDFA EEDTVLVDVD HLASDNKLVI KKLESNASAE EMAA

Arabidopsis Description

CLPB4Chaperone protein ClpB4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VYJ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.