Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038806_P001 | Maize | nucleus | 97.48 | 97.59 |
| Os05t0519700-01 | Rice | nucleus | 96.5 | 96.6 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 94.3 | 94.0 |
| TraesCS1D01G342100.1 | Wheat | golgi | 94.3 | 93.79 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 93.98 | 93.57 |
| TraesCS1A01G340100.1 | Wheat | nucleus | 93.65 | 93.14 |
| EES01468 | Sorghum | nucleus | 88.28 | 88.09 |
| GSMUA_Achr1P13710_001 | Banana | cytosol | 81.49 | 87.43 |
| GSMUA_Achr3P16240_001 | Banana | cytosol | 80.18 | 85.92 |
| VIT_17s0000g07190.t01 | Wine grape | nucleus | 85.65 | 85.84 |
| CDX96531 | Canola | cytosol | 69.44 | 85.33 |
| CDX73074 | Canola | cytosol | 69.33 | 85.2 |
| KRH54672 | Soybean | endoplasmic reticulum | 69.77 | 84.59 |
| AT1G74310.1 | Thale cress | nucleus | 84.23 | 84.41 |
| Bra015922.1-P | Field mustard | nucleus | 84.01 | 84.19 |
| KRH56831 | Soybean | endoplasmic reticulum | 83.9 | 84.08 |
| CDX85823 | Canola | nucleus | 80.94 | 83.69 |
| Bra003807.1-P | Field mustard | nucleus | 79.85 | 82.65 |
| Solyc03g115230.2.1 | Tomato | plastid | 81.93 | 82.11 |
| CDX68190 | Canola | nucleus | 73.17 | 81.96 |
| PGSC0003DMT400063352 | Potato | nucleus | 81.71 | 81.8 |
| Solyc06g082560.1.1 | Tomato | plastid | 74.48 | 79.63 |
| AT4G14670.1 | Thale cress | cytosol | 47.75 | 69.98 |
| OQU85081 | Sorghum | mitochondrion, plastid | 42.72 | 54.32 |
| OQU81585 | Sorghum | cytosol | 35.6 | 50.31 |
| AT4G14675.1 | Thale cress | cytosol | 8.11 | 46.54 |
| EER94678 | Sorghum | plastid | 49.07 | 45.57 |
| EES06386 | Sorghum | mitochondrion | 47.1 | 43.43 |
| EES13207 | Sorghum | cytosol | 18.62 | 40.57 |
| OQU79828 | Sorghum | plastid | 34.28 | 40.44 |
| OQU81478 | Sorghum | cytosol | 37.13 | 39.84 |
| KXG23307 | Sorghum | plastid | 38.44 | 38.11 |
| EES12052 | Sorghum | plastid | 38.34 | 38.0 |
| EES05165 | Sorghum | plastid | 36.8 | 35.11 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.3 | Gene3D:3.40.50.300 | EntrezGene:8067531 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_core | UniProt:C5Z1B4 | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C |
| InterPro:Clp_N | InterPro:Clp_N_dom_sf | ncoils:Coil | EnsemblPlants:EES19828 | ProteinID:EES19828 | ProteinID:EES19828.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0034605 | InterPro:IPR036628 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
| ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF146 | SMART:SM00382 | SMART:SM01086 |
| EnsemblPlantsGene:SORBI_3009G201500 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | unigene:Sbi.12616 | UniParc:UPI0001A890E7 | RefSeq:XP_002441398.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:55096931..55101127
Molecular Weight (calculated)
101195.0 Da
IEP (calculated)
5.856
GRAVY (calculated)
-0.338
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPDNFTHKT NEALVAAHEM ASEAGHAQLT PLHLAAALAA DKGGILRQAI TGASGGDGAA GESFERVLSN ALKKLPSQSP PPDSVPASTA LIKVIRRAQS
101: AQKKRGDSHL AVDQLLLGLV EDSQISDCLK EAGVSAARVR AELEKLRGGE GRRVESASGD TNFQALKTYG RDLVEQAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRIVRGD VPSNLLDVRL IALDMGALVA GAKYRGEFEE RLKSVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVF VAEPSVPDTI SILRGLKEKY EGHHGVRIQD RALVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEKEKDKAS KARLVEVKKE LDDLRDKLQP LTMKYRKEKE RIDEIRKLKQ RREELQFSLQ EAERRMDLAR
501: VADLKYGALQ EIDAAISKLE SETGENLMLT ETVGPEQIAE VVSRWTGIPV TRLGQNDKER LVGLADRLHQ RVVGQTEAVN AVAEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGKNSMKVA RDLVMQEVRR HFRPELLNRL DEIVIFDPLS HEQLRKVARL QMKDVAVRLA ERGIALAVTD
801: AALDIILSLS YDPVYGARPI RRWIEKRVVT QLSKMLIQEE IDENCTVYID AAPAKDELAY RVDRSGGLVN AETGLKSDIL IQVPNDAVRS DAAQAVKKMR
901: IMEEEDEDGM DEE
101: AQKKRGDSHL AVDQLLLGLV EDSQISDCLK EAGVSAARVR AELEKLRGGE GRRVESASGD TNFQALKTYG RDLVEQAGKL DPVIGRDEEI RRVVRILSRR
201: TKNNPVLIGE PGVGKTAVVE GLAQRIVRGD VPSNLLDVRL IALDMGALVA GAKYRGEFEE RLKSVLKEVE EAEGKVILFI DEIHLVLGAG RTEGSMDAAN
301: LFKPMLARGQ LRCIGATTLE EYRKYVEKDA AFERRFQQVF VAEPSVPDTI SILRGLKEKY EGHHGVRIQD RALVVAAQLS ARYIMGRHLP DKAIDLVDEA
401: CANVRVQLDS QPEEIDNLER KRIQLEVELH ALEKEKDKAS KARLVEVKKE LDDLRDKLQP LTMKYRKEKE RIDEIRKLKQ RREELQFSLQ EAERRMDLAR
501: VADLKYGALQ EIDAAISKLE SETGENLMLT ETVGPEQIAE VVSRWTGIPV TRLGQNDKER LVGLADRLHQ RVVGQTEAVN AVAEAVLRSR AGLGRPQQPT
601: GSFLFLGPTG VGKTELAKAL AEQLFDDENL LVRIDMSEYM EQHSVARLIG APPGYVGHEE GGQLTEQVRR RPYSVILFDE VEKAHVAVFN TLLQVLDDGR
701: LTDGQGRTVD FRNTVIIMTS NLGAEHLLAG MVGKNSMKVA RDLVMQEVRR HFRPELLNRL DEIVIFDPLS HEQLRKVARL QMKDVAVRLA ERGIALAVTD
801: AALDIILSLS YDPVYGARPI RRWIEKRVVT QLSKMLIQEE IDENCTVYID AAPAKDELAY RVDRSGGLVN AETGLKSDIL IQVPNDAVRS DAAQAVKKMR
901: IMEEEDEDGM DEE
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.