Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0269000-00 | Rice | cytosol, plasma membrane | 29.84 | 58.63 |
| EES13207 | Sorghum | cytosol | 31.14 | 57.52 |
| HORVU4Hr1G014120.2 | Barley | plastid | 58.66 | 48.4 |
| KXG23307 | Sorghum | plastid | 56.98 | 47.88 |
| TraesCS4D01G081100.1 | Wheat | plastid | 57.75 | 47.55 |
| TraesCS4A01G232800.1 | Wheat | plastid | 57.62 | 47.55 |
| EES12052 | Sorghum | plastid | 56.46 | 47.45 |
| TraesCS4B01G083000.1 | Wheat | plastid | 57.62 | 47.45 |
| OQU85081 | Sorghum | mitochondrion, plastid | 34.88 | 37.6 |
| OQU81585 | Sorghum | cytosol | 30.49 | 36.53 |
| OQU81478 | Sorghum | cytosol | 39.15 | 35.61 |
| EES01468 | Sorghum | nucleus | 40.57 | 34.32 |
| EES19828 | Sorghum | nucleus | 40.44 | 34.28 |
| EES06386 | Sorghum | mitochondrion | 42.64 | 33.33 |
| EER94678 | Sorghum | plastid | 41.99 | 33.06 |
| EES05165 | Sorghum | plastid | 40.31 | 32.6 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | Gene3D:4.10.860.10 | UniProt:A0A1Z5R7U3 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_core | InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlants:OQU79828 | ProteinID:OQU79828 |
| ProteinID:OQU79828.1 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 |
| ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR43572 | PANTHER:PTHR43572:SF21 | SMART:SM00382 | SMART:SM01086 |
| EnsemblPlantsGene:SORBI_3007G027800 | SUPFAM:SSF52540 | UniParc:UPI000B8BA19D | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:2518724..2522734
Molecular Weight (calculated)
84970.7 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.250
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQNHGTTTK TQAFGCLRAV HRPAVTPVLG YKSIFRSRQR GQKNSRLVTR ATLNSFSGEV KNIFALAQEE TQHLALKSGI SQVLWSHILQ CICILLLDLI
101: LRPCLNEVFQ IINGRVRRGS SESPLKTRSN DDSLEKRSSK TCAETKNKIS TPTLDEYGTD LTTLANKGKL DPVIGRQKQI DQVVQILSRK GKNNPCLIGE
201: PGVGKTAVVE SLAQLIAMGD VPETMQGKKV ISVDIGCLLA GTKYRGEFEE RLKNLLEEIK QLGAGAAVEG AIDAANILKP ALARGELQCI GATTTDGYMK
301: HIEKDPALER RFRQVKVPEP MVEEAIEILK GLRERYETHH KVQYADEALS AAAELSHKYI SDRFLPDKAI DLIDEAGSLV RLRHAQPKLP KELQDFVTEI
401: KKITKEKCDT IRIENFKKAK ELRDRELELK SQLTTTLQIG NDEVSPGMSA VPPVVTKEDI RHIVSLCSGV PDGGGLHRRI IGQDEAVTAV SRAIRRARVG
501: LSDPRRPIAS FVFAGPTGVG KSELAKAVAA YYYGSEDAMV RLDMSELMEK HAVARLVGAP PGYVGHGEGG GQLTEAVRRR PHSLVLLDEV DKAHPEVMDV
601: LLQVLDDGRL TDGMGRTVDF RNTLIIMTSN IGGGNGGSGD GSRSSSKEVV EEEMKRYFRP EFLNRLDETI VFRPLTRVDG KEIAAVLVSD VAARVSRETM
701: MVVELRVTER FMDLVVEEGF DPWYGARALR RAVVMLLEDT LADKLLDGEI VKAGDTVIVD ADAAGNVVVL GPDS
101: LRPCLNEVFQ IINGRVRRGS SESPLKTRSN DDSLEKRSSK TCAETKNKIS TPTLDEYGTD LTTLANKGKL DPVIGRQKQI DQVVQILSRK GKNNPCLIGE
201: PGVGKTAVVE SLAQLIAMGD VPETMQGKKV ISVDIGCLLA GTKYRGEFEE RLKNLLEEIK QLGAGAAVEG AIDAANILKP ALARGELQCI GATTTDGYMK
301: HIEKDPALER RFRQVKVPEP MVEEAIEILK GLRERYETHH KVQYADEALS AAAELSHKYI SDRFLPDKAI DLIDEAGSLV RLRHAQPKLP KELQDFVTEI
401: KKITKEKCDT IRIENFKKAK ELRDRELELK SQLTTTLQIG NDEVSPGMSA VPPVVTKEDI RHIVSLCSGV PDGGGLHRRI IGQDEAVTAV SRAIRRARVG
501: LSDPRRPIAS FVFAGPTGVG KSELAKAVAA YYYGSEDAMV RLDMSELMEK HAVARLVGAP PGYVGHGEGG GQLTEAVRRR PHSLVLLDEV DKAHPEVMDV
601: LLQVLDDGRL TDGMGRTVDF RNTLIIMTSN IGGGNGGSGD GSRSSSKEVV EEEMKRYFRP EFLNRLDETI VFRPLTRVDG KEIAAVLVSD VAARVSRETM
701: MVVELRVTER FMDLVVEEGF DPWYGARALR RAVVMLLEDT LADKLLDGEI VKAGDTVIVD ADAAGNVVVL GPDS
001: MKMSSLKAPV LRIQATEYRE PRGRVKMMSS LQAPLLTIQS FSGLRAPSAL DYLGRPSPGF LVKYKLAKSS GREKASRCVP KAMFERFTEK AIKVIMLSQE
101: EARRLGHNFV GTEQILLGLI GEGTGIAAKV LKSMGINLKD SRVEVEKIIG RGSGFVAVEI PFTPRAKRVL ELSLEEARQL GHNYIGSEHL LLGLLREGEG
201: VAARVLENLG ADPSNIRTQV IRMVGENNEV TASVGGGSSG NSKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL ARRTKNNPCL IGEPGVGKTA
301: IAEGLAQRIA SGDVPETIEG KTVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR GELQCIGATT
401: IDEYRKHIEK DPALERRFQP VKVPEPTVEE AIQILQGLRE RYEIHHKLRY TDEALVAAAQ LSHQYISDRF LPDKAIDLID EAGSRVRLRH AQLPEEAREL
501: EKQLRQITKE KNEAVRSQDF EMAGSHRDRE IELKAEIANV LSRGKEVAKA ENEAEEGGPT VTESDIQHIV ATWTGIPVEK VSSDESSRLL QMEQTLHTRV
601: IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG QLTEAVRRRP
701: YTLVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDHDE KDSSYNRIKS LVTEELKQYF RPEFLNRLDE
801: MIVFRQLTKL EVKEIADIML KEVVARLEVK EIELQVTERF KERVVDEGFD PSYGARPLRR AIMRLLEDSM AEKMLSRDIK EGDSVIVDVD AEGSVVVLSG
901: TTGRVGGFAA EEAMEDPIPI L
101: EARRLGHNFV GTEQILLGLI GEGTGIAAKV LKSMGINLKD SRVEVEKIIG RGSGFVAVEI PFTPRAKRVL ELSLEEARQL GHNYIGSEHL LLGLLREGEG
201: VAARVLENLG ADPSNIRTQV IRMVGENNEV TASVGGGSSG NSKMPTLEEY GTNLTKLAEE GKLDPVVGRQ PQIERVVQIL ARRTKNNPCL IGEPGVGKTA
301: IAEGLAQRIA SGDVPETIEG KTVITLDMGL LVAGTKYRGE FEERLKKLME EIRQSDEIIL FIDEVHTLIG AGAAEGAIDA ANILKPALAR GELQCIGATT
401: IDEYRKHIEK DPALERRFQP VKVPEPTVEE AIQILQGLRE RYEIHHKLRY TDEALVAAAQ LSHQYISDRF LPDKAIDLID EAGSRVRLRH AQLPEEAREL
501: EKQLRQITKE KNEAVRSQDF EMAGSHRDRE IELKAEIANV LSRGKEVAKA ENEAEEGGPT VTESDIQHIV ATWTGIPVEK VSSDESSRLL QMEQTLHTRV
601: IGQDEAVKAI SRAIRRARVG LKNPNRPIAS FIFSGPTGVG KSELAKALAA YYFGSEEAMI RLDMSEFMER HTVSKLIGSP PGYVGYTEGG QLTEAVRRRP
701: YTLVLFDEIE KAHPDVFNMM LQILEDGRLT DSKGRTVDFK NTLLIMTSNV GSSVIEKGGR RIGFDLDHDE KDSSYNRIKS LVTEELKQYF RPEFLNRLDE
801: MIVFRQLTKL EVKEIADIML KEVVARLEVK EIELQVTERF KERVVDEGFD PSYGARPLRR AIMRLLEDSM AEKMLSRDIK EGDSVIVDVD AEGSVVVLSG
901: TTGRVGGFAA EEAMEDPIPI L
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.