Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G429500.1 | Wheat | cytosol | 98.51 | 98.51 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 91.48 | 91.62 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 77.28 | 83.12 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 83.71 | 81.28 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 72.94 | 74.62 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 74.29 | 73.74 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 62.18 | 72.35 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 71.45 | 71.66 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 71.0 | 71.64 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 67.12 | 65.07 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 65.47 | 64.89 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 70.4 | 64.17 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 44.1 | 62.24 |
| OQU85081 | Sorghum | mitochondrion, plastid | 63.38 | 59.05 |
| KRH63249 | Soybean | mitochondrion | 17.04 | 58.76 |
| OQU81585 | Sorghum | cytosol | 55.9 | 57.89 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 67.71 | 55.18 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 52.17 | 44.92 |
| TraesCS3B01G308100.1 | Wheat | cytosol | 53.96 | 39.54 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 53.51 | 39.04 |
| TraesCS4B01G393100.1 | Wheat | cytosol | 50.67 | 37.54 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 41.85 | 37.18 |
| TraesCS2B01G304200.1 | Wheat | golgi | 43.35 | 31.62 |
| TraesCS6B01G233800.1 | Wheat | plastid | 43.2 | 31.55 |
| TraesCS4B01G380800.1 | Wheat | plastid | 45.89 | 31.49 |
| TraesCS5B01G112500.1 | Wheat | plastid | 43.05 | 31.3 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 44.99 | 30.37 |
| TraesCS4B01G083000.1 | Wheat | plastid | 42.3 | 30.11 |
| TraesCS5B01G321800.1 | Wheat | plastid | 40.36 | 29.13 |
| TraesCS2B01G307500.1 | Wheat | plastid | 40.21 | 28.5 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core | InterPro:ClpA/B |
| InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 |
| PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5B01G422800 |
| EnsemblPlants:TraesCS5B01G422800.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:-:598657744..598660432
Molecular Weight (calculated)
72977.9 Da
IEP (calculated)
9.049
GRAVY (calculated)
-0.072
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MGETYDPLLG TLVVQGTVFH RLGAMLTCSQ GRMSSIWRRV EPLVFVVTAV SLGWAAWRYY DRKAALRTYG RHMTGKAVGL VVGRDDEIDR VISILCRKTK
101: NCAALVGPAG VGKTAIAEGL AQRIATGKVP AALAGARVVE VDLGAMVAGT KYRGMFEERM KSVIKQAENA GGKIILFIDE MHTLLGAGGA GGRGVTDASS
201: MLKPALARGR IRCVGATTFD GYRNYIEKDP ALERRFQKVH IEEPSTQATV GILRGLKQQY EQHHGLEIQD AALVAAAQLA GRYITGRQFP DKAIDLIDEA
301: CSATIKRLIQ IDNQAEELNA KQSRSANPVK GATVVPNDVA QVVSLWTGIP VCTLEEEDKD KLIHLADRLH ERVVGQNEAV NVVAEAVLRS RAGLNHPGQP
401: IGSFLFLGST GVGKTELAKA LAEQLFASEK MLVRFDMSEY VGSGSVLRLV GAPPSHQGCD DGGQLTEKVR RRPYSVILFD EVEKADPSVL NIFIQLLDDG
501: VLTDGKGRTV NFKNTIIIMT SNLGAEHLTA GMAGEITMDA ARDLLMKQVQ KHFKPELLNR LSEIVVFEPL LHDKLKEIVK IQMKSIISRV ADKGISLFAS
601: DAVLDVILSE SYNPMYGARP IRRWLQKNVM IKLSQMLVKG EASEGSTISI DATDDKKKLK FEVVKKVEE
101: NCAALVGPAG VGKTAIAEGL AQRIATGKVP AALAGARVVE VDLGAMVAGT KYRGMFEERM KSVIKQAENA GGKIILFIDE MHTLLGAGGA GGRGVTDASS
201: MLKPALARGR IRCVGATTFD GYRNYIEKDP ALERRFQKVH IEEPSTQATV GILRGLKQQY EQHHGLEIQD AALVAAAQLA GRYITGRQFP DKAIDLIDEA
301: CSATIKRLIQ IDNQAEELNA KQSRSANPVK GATVVPNDVA QVVSLWTGIP VCTLEEEDKD KLIHLADRLH ERVVGQNEAV NVVAEAVLRS RAGLNHPGQP
401: IGSFLFLGST GVGKTELAKA LAEQLFASEK MLVRFDMSEY VGSGSVLRLV GAPPSHQGCD DGGQLTEKVR RRPYSVILFD EVEKADPSVL NIFIQLLDDG
501: VLTDGKGRTV NFKNTIIIMT SNLGAEHLTA GMAGEITMDA ARDLLMKQVQ KHFKPELLNR LSEIVVFEPL LHDKLKEIVK IQMKSIISRV ADKGISLFAS
601: DAVLDVILSE SYNPMYGARP IRRWLQKNVM IKLSQMLVKG EASEGSTISI DATDDKKKLK FEVVKKVEE
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.