Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G422800.1 | Wheat | cytosol | 91.62 | 91.48 |
| TraesCS5D01G429400.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 90.57 | 90.7 |
| TraesCS5D01G429500.1 | Wheat | cytosol | 90.72 | 90.58 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 18.71 | 81.17 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 71.86 | 73.06 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 51.65 | 72.33 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 60.63 | 72.19 |
| HORVU7Hr1G105270.3 | Barley | cytosol | 70.66 | 66.11 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 42.37 | 64.32 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 68.71 | 63.66 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 32.63 | 61.93 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 57.48 | 60.47 |
| KRH63249 | Soybean | mitochondrion | 17.22 | 59.28 |
| OQU85081 | Sorghum | mitochondrion, plastid | 62.72 | 58.36 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 18.56 | 56.62 |
| OQU81585 | Sorghum | cytosol | 54.04 | 55.88 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 19.91 | 55.88 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 24.4 | 55.82 |
| HORVU6Hr1G063810.3 | Barley | plastid | 20.36 | 48.23 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 52.99 | 38.73 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 52.84 | 38.54 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 39.67 | 34.69 |
| HORVU2Hr1G072020.5 | Barley | plastid | 40.27 | 32.25 |
| HORVU2Hr1G071080.3 | Barley | plastid | 44.16 | 32.17 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 7.63 | 31.29 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 45.36 | 30.79 |
| HORVU4Hr1G014120.2 | Barley | plastid | 42.37 | 30.17 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 43.41 | 29.8 |
| HORVU4Hr1G090440.2 | Barley | plastid | 45.96 | 29.02 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287SII2 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:HORVU5Hr1G102440 | EnsemblPlants:HORVU5Hr1G102440.2 | InterPro:P-loop_NTPase | PFAM:PF00004 |
| PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 |
| SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | UniParc:UPI000B46EA47 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:-:614302890..614305817
Molecular Weight (calculated)
72644.4 Da
IEP (calculated)
9.045
GRAVY (calculated)
-0.038
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: TAMRGAYDPL LGARVVQGTV FYRLGALLMQ SQSRMSLIWR RVEPLVFLGT AVSLGWAAWN YYDRKSALRT YGRLMTGKTV GLVVGRDDEI DRVISILCRK
101: TKNCAALVGP AGVGKTAIAE GLAQRIATGK VPATLAGACV VEVDLGAMVA GTRYRGMFEE RMKSVIKQAE KAGGKIILFI DEVHTLLGAG GAGGRGVTDA
201: SSMLKPALAR GRIRCVGATT FDGYRNYIEK DPALERRFQK VHIEEPSTLA TIGILRGLKQ QYEQHHGLEI EDAALVAAAQ LAGRYITGRQ FPDKAIDLID
301: EACSTTIKRV MQIDNQGEEL NAKQSRSTNS VKGATVVPND VAHVVSQWTG IPVCILEQAD KDKLIHLADR LHERVVGQDE AVNVVAEAVL RSRAGLNHPG
401: QPIGSFLFLG STGVGKTELA KALAEQLFAS EKMLVRFDMS EYIGSGSVLR LIGAPPSHHA CDDGGQLTEK VRRRPYSVVL FDEVEKADPS VLNIFIQLLD
501: DGVLTDGKGR TVDFKNTIII MTSNLGAEHL TAGXXEITMD VARELLMKQV QKHFKPELLN RLSEIVVFEP VLHDKLKEIV KIQMKSIISR VADKGISLFA
601: SDAALAVVLS ESYNPMYGAR PIRRWLQKNV MIKLSQMLVN GEASEGSTIS IDSTDDKKLK FEVVKVAE
101: TKNCAALVGP AGVGKTAIAE GLAQRIATGK VPATLAGACV VEVDLGAMVA GTRYRGMFEE RMKSVIKQAE KAGGKIILFI DEVHTLLGAG GAGGRGVTDA
201: SSMLKPALAR GRIRCVGATT FDGYRNYIEK DPALERRFQK VHIEEPSTLA TIGILRGLKQ QYEQHHGLEI EDAALVAAAQ LAGRYITGRQ FPDKAIDLID
301: EACSTTIKRV MQIDNQGEEL NAKQSRSTNS VKGATVVPND VAHVVSQWTG IPVCILEQAD KDKLIHLADR LHERVVGQDE AVNVVAEAVL RSRAGLNHPG
401: QPIGSFLFLG STGVGKTELA KALAEQLFAS EKMLVRFDMS EYIGSGSVLR LIGAPPSHHA CDDGGQLTEK VRRRPYSVVL FDEVEKADPS VLNIFIQLLD
501: DGVLTDGKGR TVDFKNTIII MTSNLGAEHL TAGXXEITMD VARELLMKQV QKHFKPELLN RLSEIVVFEP VLHDKLKEIV KIQMKSIISR VADKGISLFA
601: SDAALAVVLS ESYNPMYGAR PIRRWLQKNV MIKLSQMLVN GEASEGSTIS IDSTDDKKLK FEVVKVAE
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.