Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G456700.1 | Wheat | mitochondrion | 61.06 | 92.18 |
| TraesCS7D01G445400.1 | Wheat | cytosol | 71.85 | 90.32 |
| HORVU7Hr1G105530.1 | Barley | cytosol | 82.07 | 89.19 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 81.93 | 87.71 |
| HORVU7Hr1G105430.1 | Barley | cytosol | 68.49 | 87.17 |
| HORVU5Hr1G123460.3 | Barley | mitochondrion | 48.18 | 72.12 |
| HORVU5Hr1G102440.2 | Barley | mitochondrion, plastid | 66.11 | 70.66 |
| HORVU5Hr1G102460.1 | Barley | cytosol | 15.13 | 70.13 |
| HORVU1Hr1G068970.1 | Barley | cytosol | 66.11 | 65.46 |
| HORVU7Hr1G035110.4 | Barley | cytosol | 39.64 | 64.32 |
| HORVU7Hr1G009000.2 | Barley | cytosol | 30.67 | 62.22 |
| HORVU7Hr1G008940.2 | Barley | cytosol | 54.34 | 61.1 |
| KRH63249 | Soybean | mitochondrion | 16.39 | 60.31 |
| OQU85081 | Sorghum | mitochondrion, plastid | 59.94 | 59.61 |
| HORVU4Hr1G008860.1 | Barley | cytosol, peroxisome | 18.21 | 59.36 |
| OQU81585 | Sorghum | cytosol | 52.66 | 58.2 |
| HORVU7Hr1G008380.2 | Barley | cytosol | 23.25 | 56.85 |
| HORVU7Hr1G008950.1 | Barley | cytosol, plastid | 18.63 | 55.88 |
| HORVU6Hr1G063810.3 | Barley | plastid | 19.47 | 49.29 |
| HORVU3Hr1G071120.7 | Barley | cytosol | 50.28 | 39.28 |
| HORVU1Hr1G076190.4 | Barley | nucleus | 49.44 | 38.54 |
| HORVU5Hr1G081860.1 | Barley | cytosol | 37.53 | 35.08 |
| HORVU2Hr1G072020.5 | Barley | plastid | 38.1 | 32.61 |
| HORVU2Hr1G071080.3 | Barley | plastid | 40.34 | 31.41 |
| HORVU1Hr1G076100.1 | Barley | cytosol | 6.86 | 30.06 |
| HORVU4Hr1G014120.2 | Barley | plastid | 38.94 | 29.64 |
| HORVU5Hr1G031470.6 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 40.2 | 29.5 |
| HORVU6Hr1G028690.1 | Barley | mitochondrion | 40.34 | 29.27 |
| HORVU4Hr1G090440.2 | Barley | plastid | 41.18 | 27.79 |
Protein Annotations
| Gene3D:1.10.8.60 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287XMZ2 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:Clp_ATPase_C | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:HORVU7Hr1G105270 | EnsemblPlants:HORVU7Hr1G105270.3 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF07724 |
| PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | PANTHER:PTHR11638 | PANTHER:PTHR11638:SF100 | SMART:SM00382 |
| SMART:SM01086 | SUPFAM:SSF52540 | UniParc:UPI000B4728CB | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:616410387..616414159
Molecular Weight (calculated)
78149.7 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.126
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: PMEPTAIYDS RLGTWILVSD GEPPSSAVLD GISRFYHGAE RVLCIGAAFG LCWAAWRYYQ RNSYLRSYAR DMTGSKQAAS PVVGRDSEID RVVSILCRKT
101: KNCAALVGAA GVGKTAIAEG LAQRIAAGKV PAALAGARIV EIDLTAMVSG TMFRGMFEER IKGVIKQAED SRGKIVLFID EMHMLLGAGE GKGGCNDAAN
201: ILKPALARGR IRCVGATTFD DYRKYVEKDA ALERRFQKVH VDEPSMQATI AMVRALKQQY EQHHGLEIQD AALVAAVQLA GRYITDRQFP DKAIDLIDEA
301: CATAAKKMMP VGDQEEDVNT MQISSKNAVK EAIVCPNHVA QVVSQWTGIP VTALDQEEKD RLIHLTSRLR ERVVGQDEAV NLVAQAVLRS RAGFDQPGQP
401: IGSFLFLGST GVGKTELAKA LAVQLFDSEK LLVRFDMSEY VDRGSVLRLI GAPPSYEGHE EGGQLTEKIR RRPYSVILFD EVEKADPLVL NLFIQLLDDG
501: VLTDGKGRTV DFKNTIIIMT SNLGAEHLTA GMAGKITMEA ARDLVMQQVQ KHFKPELRNR MSEIVIFEPL SRDKLKEIVK IQMKSIVASV ASKGISLSAS
601: DASLDVVLSE SYNPMYGARP VKRWLLKNVM TDLSEMLLSG QIGEGSSVSI DADNDKRLKF EVLKKVSDPQ HKSPTVKLPG SPSLEGKFSS LLQFLPYGLP
701: QSGTRLAKHL ARIC
101: KNCAALVGAA GVGKTAIAEG LAQRIAAGKV PAALAGARIV EIDLTAMVSG TMFRGMFEER IKGVIKQAED SRGKIVLFID EMHMLLGAGE GKGGCNDAAN
201: ILKPALARGR IRCVGATTFD DYRKYVEKDA ALERRFQKVH VDEPSMQATI AMVRALKQQY EQHHGLEIQD AALVAAVQLA GRYITDRQFP DKAIDLIDEA
301: CATAAKKMMP VGDQEEDVNT MQISSKNAVK EAIVCPNHVA QVVSQWTGIP VTALDQEEKD RLIHLTSRLR ERVVGQDEAV NLVAQAVLRS RAGFDQPGQP
401: IGSFLFLGST GVGKTELAKA LAVQLFDSEK LLVRFDMSEY VDRGSVLRLI GAPPSYEGHE EGGQLTEKIR RRPYSVILFD EVEKADPLVL NLFIQLLDDG
501: VLTDGKGRTV DFKNTIIIMT SNLGAEHLTA GMAGKITMEA ARDLVMQQVQ KHFKPELRNR MSEIVIFEPL SRDKLKEIVK IQMKSIVASV ASKGISLSAS
601: DASLDVVLSE SYNPMYGARP VKRWLLKNVM TDLSEMLLSG QIGEGSSVSI DADNDKRLKF EVLKKVSDPQ HKSPTVKLPG SPSLEGKFSS LLQFLPYGLP
701: QSGTRLAKHL ARIC
001: MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
101: SGREKASRCV PKAMFERFTE KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII GRGSGFVAVE IPFTPRAKRV
201: LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR
301: QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI
401: GAGAAEGAID AANILKPALA RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR YTDEALVAAA QLSHQYISDR
501: FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI
601: VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME
701: RHTVSKLIGS PPGYVGYTEG GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN VGSSVIEKGG RRIGFDLDHD
801: EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS
901: MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL
Arabidopsis Description
CLPC2Chaperone protein ClpC2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SXJ7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.