Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G308100.1 | Wheat | cytosol | 76.85 | 76.01 |
| TraesCS1B01G352400.1 | Wheat | cytosol, golgi | 74.75 | 73.61 |
| EES01468 | Sorghum | nucleus | 74.09 | 73.11 |
| GSMUA_Achr1P13710_001 | Banana | cytosol | 67.0 | 71.09 |
| KRH54672 | Soybean | endoplasmic reticulum | 59.14 | 70.92 |
| CDX96531 | Canola | cytosol | 57.7 | 70.12 |
| CDX73074 | Canola | cytosol | 57.48 | 69.85 |
| GSMUA_Achr3P16240_001 | Banana | cytosol | 65.89 | 69.84 |
| KRH56831 | Soybean | endoplasmic reticulum | 70.32 | 69.7 |
| VIT_17s0000g07190.t01 | Wine grape | nucleus | 69.99 | 69.37 |
| CDX85823 | Canola | nucleus | 67.55 | 69.08 |
| Bra015922.1-P | Field mustard | nucleus | 69.44 | 68.83 |
| Solyc06g082560.1.1 | Tomato | plastid | 64.78 | 68.5 |
| AT1G74310.1 | Thale cress | nucleus | 69.1 | 68.5 |
| Solyc03g115230.2.1 | Tomato | plastid | 68.88 | 68.28 |
| Bra003807.1-P | Field mustard | nucleus | 66.67 | 68.25 |
| PGSC0003DMT400063352 | Potato | nucleus | 68.88 | 68.2 |
| CDX68190 | Canola | nucleus | 61.02 | 67.61 |
| AT4G14670.1 | Thale cress | cytosol | 43.52 | 63.08 |
| TraesCS5B01G554000.1 | Wheat | cytosol | 35.77 | 56.17 |
| TraesCS4B01G046000.1 | Wheat | cytosol | 39.09 | 53.24 |
| TraesCS7B01G357500.1 | Wheat | cytosol | 37.65 | 51.99 |
| TraesCS5B01G422900.1 | Wheat | cytosol | 35.55 | 51.61 |
| TraesCS7B01G357600.2 | Wheat | cytosol | 38.32 | 51.34 |
| TraesCS5B01G537100.1 | Wheat | mitochondrion | 38.21 | 51.11 |
| TraesCS5B01G422800.1 | Wheat | cytosol | 37.54 | 50.67 |
| TraesCS2B01G158300.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 37.54 | 49.13 |
| TraesCS7B01G357400.1 | Wheat | cytosol | 35.88 | 48.58 |
| TraesCS5B01G423000.1 | Wheat | cytosol | 36.88 | 48.33 |
| TraesCS1B01G315600.1 | Wheat | cytosol | 38.65 | 47.55 |
| TraesCS5B01G070000.1 | Wheat | mitochondrion | 24.03 | 45.78 |
| TraesCS4B01G090300.1 | Wheat | mitochondrion | 38.65 | 44.92 |
| TraesCS6B01G278000.1 | Wheat | cytosol | 39.31 | 43.24 |
| TraesCS4B01G380800.1 | Wheat | plastid | 45.63 | 42.26 |
| TraesCS4B01G082900.1 | Wheat | mitochondrion | 34.55 | 41.43 |
| TraesCS6B01G174500.1 | Wheat | mitochondrion | 44.08 | 40.16 |
| AT4G14675.1 | Thale cress | cytosol | 6.87 | 38.99 |
| TraesCS5B01G112500.1 | Wheat | plastid | 37.98 | 37.28 |
| TraesCS6B01G233800.1 | Wheat | plastid | 37.76 | 37.23 |
| TraesCS2B01G304200.1 | Wheat | golgi | 37.76 | 37.19 |
| TraesCS4B01G083000.1 | Wheat | plastid | 36.99 | 35.53 |
| TraesCS5B01G321800.1 | Wheat | plastid | 35.11 | 34.2 |
| TraesCS2B01G307500.1 | Wheat | plastid | 35.55 | 34.0 |
Protein Annotations
| Gene3D:1.10.1780.10 | Gene3D:1.10.8.60 | MapMan:26.4.2.3 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_core |
| InterPro:ClpA/B | InterPro:ClpA/B_CS1 | InterPro:ClpA/B_CS2 | InterPro:Clp_ATPase_C | InterPro:Clp_N | InterPro:Clp_N_dom_sf |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0019538 | InterPro:IPR036628 | InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02861 |
| PFAM:PF07724 | PFAM:PF10431 | PRINTS:PR00300 | ScanProsite:PS00870 | ScanProsite:PS00871 | PANTHER:PTHR11638 |
| PANTHER:PTHR11638:SF146 | SMART:SM00382 | SMART:SM01086 | SUPFAM:SSF52540 | SUPFAM:SSF81923 | EnsemblPlantsGene:TraesCS4B01G393100 |
| EnsemblPlants:TraesCS4B01G393100.1 | TIGR:cd00009 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:+:667726285..667729362
Molecular Weight (calculated)
99792.9 Da
IEP (calculated)
6.529
GRAVY (calculated)
-0.367
Length
903 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNMFTYKT NEALNVAHEV ASEAGHEELT PLHLAAVLAK DRSGILRQAI AHASDGSDDA GKSFERVVAT ALRGLPSPPL SQPRERERDT VQASTSLFKV
101: IRRAQSAQMS LGDSHLGVHQ LLVGLLQDAH ISDALNEAGV PVARVKDEVE KLRGGDNRRV DSASGDTNLQ ALKTYGRDLV DVAGAGKLDP VIGRDEEIGR
201: VVRILSRRTK NNPVLIGEPG VGKTAVVEGL ALRIMRGDVP SNLRDVRLVE LDMGMLLAGA KYRGEFEERL KAVLKEVEEA EGKVTLFIDE IHLVLGAGRM
301: EGAMDAANLF KPMLARGQLR CIGATTLDEY RRYVEKDGAF ERRFQQVFVA EPSVNDTVSI LRGLKERYEG HHGVSIQDRA LVVAAQLSSR YITERHLPDK
401: AIDLIDEACA SVRVQLDSQP EEIDSLERKK IQLKIDLLSL NKDKDKGNQD DLRKVSEQLG ALEEKLRPLK DQYEEEKARI DRIRHLKQRR DELQTAVQEA
501: ERRMDLARVA DLKYGALKEI DDTIAKLEDK IGTGVKLMLT ETVAPERIAE VVSRWTGIPV TRLGQNEKVR LLGLLQRLRD RVVGQDEAVN AVGKAVLRSR
601: AGLGRPQQPT GSFMFLGSTG VGKTELAKAL AEQLFDDENL MVRLDMSEYR EEHSVARLIG APPGYAGHEQ GGQLTEPVRR RPYSLILFDE AEKANVQVLN
701: ILLQVLDDGR LTDGQGRTVD FKNTVIIMTS NIGADHLLKG IKGSSTSMEQ AHGKVMEEVK GHFHPELLNR LDKIVIFDPL SHKQLRKVAR RHMKDVEARL
801: AERRVALVIT DDALHVILSQ PHDPGHGARP IKGWIEDNIV TVLSVMLINE EIAENSTVYV DAAPNKNELT YRVDKDGGVV NAQAGHESDI VIYVPSGSGA
901: IGK
101: IRRAQSAQMS LGDSHLGVHQ LLVGLLQDAH ISDALNEAGV PVARVKDEVE KLRGGDNRRV DSASGDTNLQ ALKTYGRDLV DVAGAGKLDP VIGRDEEIGR
201: VVRILSRRTK NNPVLIGEPG VGKTAVVEGL ALRIMRGDVP SNLRDVRLVE LDMGMLLAGA KYRGEFEERL KAVLKEVEEA EGKVTLFIDE IHLVLGAGRM
301: EGAMDAANLF KPMLARGQLR CIGATTLDEY RRYVEKDGAF ERRFQQVFVA EPSVNDTVSI LRGLKERYEG HHGVSIQDRA LVVAAQLSSR YITERHLPDK
401: AIDLIDEACA SVRVQLDSQP EEIDSLERKK IQLKIDLLSL NKDKDKGNQD DLRKVSEQLG ALEEKLRPLK DQYEEEKARI DRIRHLKQRR DELQTAVQEA
501: ERRMDLARVA DLKYGALKEI DDTIAKLEDK IGTGVKLMLT ETVAPERIAE VVSRWTGIPV TRLGQNEKVR LLGLLQRLRD RVVGQDEAVN AVGKAVLRSR
601: AGLGRPQQPT GSFMFLGSTG VGKTELAKAL AEQLFDDENL MVRLDMSEYR EEHSVARLIG APPGYAGHEQ GGQLTEPVRR RPYSLILFDE AEKANVQVLN
701: ILLQVLDDGR LTDGQGRTVD FKNTVIIMTS NIGADHLLKG IKGSSTSMEQ AHGKVMEEVK GHFHPELLNR LDKIVIFDPL SHKQLRKVAR RHMKDVEARL
801: AERRVALVIT DDALHVILSQ PHDPGHGARP IKGWIEDNIV TVLSVMLINE EIAENSTVYV DAAPNKNELT YRVDKDGGVV NAQAGHESDI VIYVPSGSGA
901: IGK
001: MNPEKFTHKT NETIATAHEL AVNAGHAQFT PLHLAGALIS DPTGIFPQAI SSAGGENAAQ SAERVINQAL KKLPSQSPPP DDIPASSSLI KVIRRAQAAQ
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
101: KSRGDTHLAV DQLIMGLLED SQIRDLLNEV GVATARVKSE VEKLRGKEGK KVESASGDTN FQALKTYGRD LVEQAGKLDP VIGRDEEIRR VVRILSRRTK
201: NNPVLIGEPG VGKTAVVEGL AQRIVKGDVP NSLTDVRLIS LDMGALVAGA KYRGEFEERL KSVLKEVEDA EGKVILFIDE IHLVLGAGKT EGSMDAANLF
301: KPMLARGQLR CIGATTLEEY RKYVEKDAAF ERRFQQVYVA EPSVPDTISI LRGLKEKYEG HHGVRIQDRA LINAAQLSAR YITGRHLPDK AIDLVDEACA
401: NVRVQLDSQP EEIDNLERKR MQLEIELHAL EREKDKASKA RLIEVRKELD DLRDKLQPLT MKYRKEKERI DEIRRLKQKR EELMFSLQEA ERRYDLARAA
501: DLRYGAIQEV ESAIAQLEGT SSEENVMLTE NVGPEHIAEV VSRWTGIPVT RLGQNEKERL IGLADRLHKR VVGQNQAVNA VSEAILRSRA GLGRPQQPTG
601: SFLFLGPTGV GKTELAKALA EQLFDDENLL VRIDMSEYME QHSVSRLIGA PPGYVGHEEG GQLTEAVRRR PYCVILFDEV EKAHVAVFNT LLQVLDDGRL
701: TDGQGRTVDF RNSVIIMTSN LGAEHLLAGL TGKVTMEVAR DCVMREVRKH FRPELLNRLD EIVVFDPLSH DQLRKVARLQ MKDVAVRLAE RGVALAVTDA
801: ALDYILAESY DPVYGARPIR RWMEKKVVTE LSKMVVREEI DENSTVYIDA GAGDLVYRVE SGGLVDASTG KKSDVLIHIA NGPKRSDAAQ AVKKMRIEEI
901: EDDDNEEMIE D
Arabidopsis Description
CLPB1Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.