CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73202
CDX87661

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	CDX73202	AT1G75820.1	9294234
AT1G75820.1	CDX87661	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015812.1-P	Field mustard	cytosol	75.68	98.29
CDX87661	Canola	plasma membrane	95.34	97.51
AT1G75820.1	Thale cress	plasma membrane	87.54	88.16
VIT_18s0001g14610.t01	Wine grape	plasma membrane	67.88	68.37
PGSC0003DMT400025747	Potato	plasma membrane	62.82	63.14
Solyc04g081590.2.1	Tomato	plasma membrane	62.41	62.47
KRH24413	Soybean	plasma membrane	61.09	61.09
KRH29397	Soybean	plasma membrane	60.49	60.86
GSMUA_Achr9P24170_001	Banana	plasma membrane	48.23	58.4
KRH29398	Soybean	cytosol	36.37	56.8
KXG20897	Sorghum	plasma membrane	56.53	55.8
Os06t0717200-01	Rice	plasma membrane	55.93	55.53
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	42.55	55.48
Zm00001d014793_P001	Maize	plasma membrane	55.52	55.02
CDY08759	Canola	plasma membrane	52.99	53.86
CDY45620	Canola	plasma membrane	52.89	53.65
CDY02112	Canola	plasma membrane	52.48	53.46
CDY23037	Canola	plasma membrane	51.98	53.05
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	31.81	51.39
CDY54567	Canola	cytosol, plasma membrane, plastid	43.67	51.07
CDY31445	Canola	cytosol, plasma membrane, plastid	43.36	50.71
CDX98665	Canola	cytosol, nucleus, plasma membrane	43.26	50.59
CDX93999	Canola	cytosol, nucleus, plasma membrane	43.26	50.59
HORVU0Hr1G022670.2	Barley	mitochondrion	54.71	50.47
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	22.09	48.77
CDY62258	Canola	plasma membrane	41.64	47.19
CDY66353	Canola	plasma membrane	41.03	47.15
TraesCS7D01G521200.1	Wheat	plasma membrane	52.68	47.02
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	20.97	46.0
CDX89518	Canola	cytosol	0.51	41.67
CDY02141	Canola	plasma membrane	35.26	39.06
CDY23065	Canola	plasma membrane	39.31	38.19
CDX97498	Canola	plasma membrane	37.79	36.53
CDY31136	Canola	plasma membrane	37.69	36.47
CDY35204	Canola	plasma membrane	37.08	36.42
CDY38373	Canola	plasma membrane	34.95	35.86
CDY37749	Canola	plasma membrane	33.33	35.34
CDY23764	Canola	plasma membrane	37.59	34.84
CDY28391	Canola	plasma membrane	36.98	34.08
CDY26259	Canola	plastid	36.47	33.36
CDY48481	Canola	plasma membrane	36.88	32.85
CDX73290	Canola	plasma membrane	36.47	32.79
CDX89328	Canola	cytosol	30.5	32.65
CDY28619	Canola	plasma membrane	35.16	32.55
CDX94319	Canola	cytosol	30.4	32.54
CDY17379	Canola	plasma membrane	35.36	32.11
CDY68314	Canola	plasma membrane	29.48	32.01
CDX72170	Canola	plasma membrane	28.77	31.91
CDY37560	Canola	plasma membrane	31.21	31.65
CDY19929	Canola	cytosol	26.55	31.38
CDY56672	Canola	cytosol	26.44	31.3
CDY27242	Canola	plasma membrane	28.37	31.25
CDY59496	Canola	plasma membrane	31.0	30.0
CDY65166	Canola	plasma membrane	30.9	29.7
CDY11130	Canola	plasma membrane	31.1	29.69
CDX77472	Canola	plasma membrane	33.74	29.39
CDX85146	Canola	plasma membrane	32.83	29.35
CDX68246	Canola	plasma membrane	32.73	29.28
CDX73169	Canola	plasma membrane	25.73	28.38
CDY14942	Canola	plasma membrane	34.35	27.27
CDX96976	Canola	plasma membrane	34.25	27.19
CDY06535	Canola	plasma membrane	32.52	20.38

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078C8M6	EnsemblPlants:CDX73202
ProteinID:CDX73202	ProteinID:CDX73202.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00103695001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF12799	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EE4D7E	SEG:seg	:

Description

BnaC06g36500D

Coordinates

chrLK031797:-:2658393..2661428

Molecular Weight (calculated)

108192.0 Da

IEP (calculated)

6.457

GRAVY (calculated)

0.052

Length

987 amino acids

Sequence
(BLAST)

001: MEMRLLKTHL LFLHLHYVIS ILLLSFSPCF ASTDMDHLLT LKSSMVGPNG HGLHDWVHST SPSAHCSFSG VSCDGDARVI SLNVSFTPLF GTISPEIGML
101: DRLVNLTLAA NNFSGMLPLE MKSLTSLKVL NISNNVNLNG TFPGEILTPM VDLEVLDAYN NNFTGPLPPE IPGLKKLRHL SLGGNFLTGE IPESYGDIQS
201: LEYLGLNGAG LSGESPAFLS RLKNLKEMYV GYFNSYTGGV PPEFGELTNL EVLDMASCTL TGEIPTTLSN LKHLHTLFLH INNLTGNIPP ELSGLISLKS
301: LDLSINQLTG EIPQSFISLW NITLINLFRN NLHGPIPEFI GDMPNLQVLQ VWENNFTLEL PANLGRNGNL KKLDVSDNHL TGLIPMDLCR GGKLETLVLS
401: DNFFFGSIPE KLGRCKSLNK IRIVKNLLNG TVPAGLFTLP LVTIIELTDN FFSGELPGEM SGDLLDHIYL SNNWFTGLIP PAIGNFKNLQ DLFLDRNRFS
501: GNIPREVFEL KHLTKINTSA NNLTGDIPDS ISRCTSLISV DLSRNRIGGD IPKDIHDVIN LGTLNLSGNQ LTGSIPIGIG KMTSLTTLDL SFNDLSGRVP
601: LGGQFLVFND TSFAGNPYLC LPRHVSCLTR PGQTSDRIHT ALFSPSRIAI TIIAAVTALI LISVAIRQMN KKKHERSLSW KLTAFQRLDF KAEDVLECLQ
701: EENIIGKGGA GIVYRGSMPN NVDVAIKRLV GRGTGRSDHG FTAEIQTLGR IRHRHIVRLL GYVANKDTNL LLYEYMPNGS LGELLHGSKG GHLQWETRHR
801: VAVEAAKGLC YLHHDCSPLI LHRDVKSNNI LLDSDFEAHV ADFGLAKFLV DGAASECMSS IAGSYGYIAP EYAYTLKVDE KSDVYSFGVV LLELIAGKKP
901: VGEFGEGVDI VRWVRNTEGE IPQPSDAATV VAIVDQRLTG YPLTSVIHVF KIAMMCVEDE ATTRPTMREV VHMLTNPPKS VTNLIAF

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.