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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KXG20897

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75820.1 KXG20897 AT1G75820.1 9294234
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d014793_P001 Maize plasma membrane 91.1 91.47
Os06t0717200-01 Rice plasma membrane 77.8 78.27
TraesCS7A01G533800.1 Wheat cytosol, plasma membrane, plastid 58.8 77.67
HORVU0Hr1G022670.2 Barley mitochondrion 76.8 71.78
TraesCS7D01G521200.1 Wheat plasma membrane 75.0 67.81
GSMUA_Achr9P24170_001 Banana plasma membrane 52.5 64.42
Bra015812.1-P Field mustard cytosol 45.8 60.26
TraesCSU01G171600.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 27.0 60.0
VIT_18s0001g14610.t01 Wine grape plasma membrane 55.7 56.84
CDX73202 Canola plasma membrane 55.8 56.53
AT1G75820.1 Thale cress plasma membrane 55.3 56.43
CDX87661 Canola plasma membrane 54.0 55.96
KRH24413 Soybean plasma membrane 53.6 54.31
Solyc04g081590.2.1 Tomato plasma membrane 53.4 54.16
PGSC0003DMT400025747 Potato plasma membrane 53.1 54.07
KRH29397 Soybean plasma membrane 52.6 53.62
EER93376 Sorghum plasma membrane 53.7 52.14
EER97948 Sorghum plasma membrane 53.5 51.89
KXG39823 Sorghum plasma membrane 49.9 49.85
KRH29398 Soybean cytosol 31.5 49.84
OQU83191 Sorghum plasma membrane 49.4 46.0
EES20075 Sorghum plasma membrane 47.6 45.33
EES13340 Sorghum plastid 39.9 38.18
EER92863 Sorghum plasma membrane 38.3 36.86
EES06133 Sorghum plasma membrane 37.0 35.51
KXG34410 Sorghum plasma membrane 38.6 34.65
EER89985 Sorghum plasma membrane 36.6 34.01
KXG26669 Sorghum plasma membrane 36.8 33.48
EES15451 Sorghum plasma membrane 35.3 32.12
EES17789 Sorghum plasma membrane 36.1 31.95
OQU80948 Sorghum plasma membrane, plastid 34.0 31.92
EES10396 Sorghum plasma membrane 37.2 31.74
KXG35861 Sorghum plastid 34.4 30.31
KXG38677 Sorghum plasma membrane 32.6 29.4
EER97238 Sorghum plasma membrane 36.7 29.2
EES02390 Sorghum plasma membrane, plastid 37.1 28.26
KXG25252 Sorghum mitochondrion, plasma membrane 31.1 26.83
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A194YLS1GO:GO:0000003
GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009506GO:GO:0009653GO:GO:0009791GO:GO:0009908
GO:GO:0009934GO:GO:0009987GO:GO:0010080GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0033612GO:GO:0040007GO:GO:0043621GO:GO:0048833
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG20897ProteinID:KXG20897ProteinID:KXG20897.1
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069
PFAM:PF00560PFAM:PF08263PFAM:PF13855PRINTS:PR00019ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27000PANTHER:PTHR27000:SF231InterPro:Prot_kinase_domSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3010G267700
SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0007F1D445SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:60242646..60247066
Molecular Weight (calculated)
106701.0 Da
IEP (calculated)
6.384
GRAVY (calculated)
0.112
Length
1000 amino acids
Sequence
(BLAST)
001: MPPPILLCFL LLLLLLLLLP APASATPERD AYALSKLKSS LVPSTNSTSN ALSDWDPTAT PPAHCAFTGV TCDAATSRVV AINLTAVPLH GGALPPEVAL
101: LDALASLTVA ACSLHGRVPP VLSSMPALRH LNLSNNNLSG SFPSPPPSPS TPYFPALELV DVYNNNLSGP LPPLGASQAR TLRYLHLGGN YFNGSIPDTF
201: GDLAALEYLG LNGNALSGRV PPSLSRLSRL REMYVGYYNQ YSGGVPPEFG DLQSLVRLDM SSCTLTGPIP PELARLSRLD TLFLSMNQLT GLIPPELGGL
301: TSLQSLDLSI NDLSGEIPDS FAGLTNLTLL NLFRNHLRGE IPEFVGEFPF LEVLQVWDNN LTGSLPPALG RNGRLKTLDV TGNHLTGTIP PDLCAGRKLQ
401: MLVLMDNAFF GSIPDSLGDC KTLTRVRLGK NMLTGPVPPG LFDLPLANML ELTDNMLTGE LPDVIAGDKI GMLMLGNNGI GGRIPAAIGN LAALQTLSLE
501: SNNFSGPLPP EIGRLRNLTR FNASGNALTG GIPRELMGCG SLGAIDLSRN GLTGEIPDTV TSLKILCTFN VSRNMLSGEL PPAISNMTSL TTLDVSYNQL
601: WGPVPMQGQF LVFNESSFVG NPGLCGAPFA GGSDPCPPSF GGARSPFSLR QWDTKKLLVW LVVLLTLLIL AILGARKARE AWREAARRRS GAWKMTAFQK
701: LDFSADDVVE CLKEDNIIGK GGAGIVYHGV TRSGAELAIK RLVGRGCGDH DRGFTAEVTT LGRIRHRNIV RLLGFVSNRE TNLLLYEYMP NGSLGEMLHG
801: GKGGHLGWEA RARVAVEAAR GLCYLHHDCA PRIIHRDVKS NNILLDSGFE AHVADFGLAK FLGGATSECM SAIAGSYGYI APEYAYTLRV DEKSDVYSFG
901: VVLLELITGR RPVGSFGDGV DIVHWVRKVT AELPDAAGAE PVLAVADRRL APEPVPLLAD LYKVAMACVE DASTARPTMR EVVHMLSTSA AAQPDVLHAF
Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)
001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
Arabidopsis Description
CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.