CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025002_P001	Maize	plasma membrane	87.8	88.78
Os04t0132500-01	Rice	plasma membrane	81.14	82.91
TraesCS2D01G013700.1	Wheat	plasma membrane	76.79	77.79
TraesCS2B01G005000.1	Wheat	plasma membrane	77.22	77.68
TraesCS2A01G012900.1	Wheat	plasma membrane	76.71	77.04
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	65.1	76.07
TraesCS4D01G005000.1	Wheat	plasma membrane	64.93	71.06
GSMUA_Achr8P12880_001	Banana	plasma membrane	39.59	66.57
TraesCSU01G061100.1	Wheat	plastid	59.9	66.04
GSMUA_Achr11P...	Banana	plasma membrane	40.19	65.06
CDY56672	Canola	cytosol	43.86	61.63
CDY19929	Canola	cytosol	43.69	61.32
VIT_07s0005g05420.t01	Wine grape	plasma membrane	50.68	60.8
VIT_05s0051g00540.t01	Wine grape	plasma membrane	58.79	60.39
Solyc09g091400.2.1	Tomato	plasma membrane	57.0	59.27
Solyc09g061940.1.1	Tomato	plasma membrane	55.8	57.98
PGSC0003DMT400040886	Potato	plasma membrane	55.8	57.93
KRH75100	Soybean	plasma membrane, plastid	54.44	57.37
Bra014998.1-P	Field mustard	plasma membrane	55.46	57.37
Bra036154.1-P	Field mustard	plasma membrane	55.12	57.32
CDX77472	Canola	plasma membrane	55.38	57.28
CDX85146	Canola	plasma membrane	53.84	57.16
KRH70959	Soybean	plastid	55.46	57.07
AT3G24240.1	Thale cress	plasma membrane	55.29	56.79
AT5G48940.1	Thale cress	plasma membrane	54.61	56.39
KRH46804	Soybean	plasma membrane	54.86	55.77
PGSC0003DMT400076247	Potato	cytosol	8.19	55.49
KRG99860	Soybean	plasma membrane	54.35	55.49
PGSC0003DMT400076250	Potato	plasma membrane	57.34	54.63
EES15451	Sorghum	plasma membrane	43.6	46.5
EER89985	Sorghum	plasma membrane	42.41	46.19
KXG35861	Sorghum	plastid	43.0	44.41
EES17789	Sorghum	plasma membrane	42.49	44.07
EES02390	Sorghum	plasma membrane, plastid	44.45	39.68
EER97948	Sorghum	plasma membrane	33.7	38.31
KXG34410	Sorghum	plasma membrane	35.92	37.79
EER93376	Sorghum	plasma membrane	32.94	37.48
KXG20897	Sorghum	plasma membrane	31.74	37.2
EER92863	Sorghum	plasma membrane	32.34	36.48
EES06133	Sorghum	plasma membrane	32.25	36.28
KXG26669	Sorghum	plasma membrane	33.87	36.12
KXG39823	Sorghum	plasma membrane	30.38	35.56
OQU83191	Sorghum	plasma membrane	32.51	35.47
EES13340	Sorghum	plastid	31.31	35.12
EES20075	Sorghum	plasma membrane	31.4	35.05
OQU80948	Sorghum	plasma membrane, plastid	29.69	32.68
KXG38677	Sorghum	plasma membrane	29.78	31.47
EER97238	Sorghum	plasma membrane	33.53	31.26
KXG25252	Sorghum	mitochondrion, plasma membrane	30.12	30.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:8065989
UniProt:C5YC38	EnsemblPlants:EES10396	ProteinID:EES10396	ProteinID:EES10396.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069
PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00369	EnsemblPlantsGene:SORBI_3006G013300	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A86C8E	RefSeq:XP_002446068.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:1909956..1914230

Molecular Weight (calculated)

123113.0 Da

IEP (calculated)

6.373

GRAVY (calculated)

0.094

Length

1172 amino acids

Sequence
(BLAST)

0001: MRRRHLLLPL LLLHLHLLLF AASSAASPSS EVAFLTSWLN TTSTRPPDWS PAASSPCNWS HISCTGTTVS SVSFQSVHLA GATLPATGLC AALPGLVSFV
0101: VSDANLTGAV PDDLWRCRRL AVLDVSGNAL TGPIPPSLGN ASALQTLALN SNQLSGSIPP ELAYLAPTLT NLLLFDNRLS GDLPPSLGDL RLLESLRAGG
0201: NRELAGLIPE SFSKLSNLVV LGLADTKISG PLPASLGQLQ SLQTLSIYTT SLSGGIPAEL GNCSNLTNVY LYENSLSGPL PPSLGALPQL QKLLLWQNAL
0301: TGPIPDSFGN LTSLVSLDLS INAISGVIPP SLGRLAALQD LMLSDNNVTG TIPPELANAT SLVQLQVDTN EISGLVPPEL GRLTALQVLF AWQNQLEGAI
0401: PPTLASLSNL QALDLSHNHL TGVIPPGLFL LRNLTKLLLL SNDLSGPLPP EIGKAASLVR LRLGGNRIAG SIPAAVAGMK SINFLDLGSN RLAGPVPAEL
0501: GNCSQLQMLD LSNNSLTGPL PESLAAVHGL QELDVSHNRL TGAVPDALGR LETLSRLVLS GNSLSGPIPP ALGKCRNLEL LDLSDNELTG NIPDELCGID
0601: GLDIALNLSR NGLTGPIPAK ISALSKLSVL DLSYNTLDGS LAPLAGLDNL VTLNVSNNNF SGYLPDTKLF RQLSTSCLAG NAGLCTKGGD VCFVSIDADG
0701: HPVTNTAEEE AQRAHRLKLA IVLLVTATVA MVLGMIGILR ARRMGFGGKN GNGGGGGGGS DSESGGELSW PWQFTPFQKL SFSVDQVVRS LVDGNIIGKG
0801: CSGVVYRVSI DTGEVIAVKK LWPSTHTCKT AAADVDGGRG VRDSFSAEVR TLGSIRHKNI VRFLGCCWNK TTRLLMYDYM ANGSLGAVLH ERRGGAGAGA
0901: AQLEWDVRYR IVLGAAQGIA YLHHDCVPPI VHRDIKANNI LIGLDFEAYI ADFGLAKLVD DGDFGRSSNT VAGSYGYIAP EYGYMMKITE KSDVYSYGVV
1001: VLEVLTGKQP IDPTIPEGQH VVDWVRRSRD RGDVLDPALR GRSRPEVEEM MQVMGVAMLC VSAAPDDRPT MKDVAAMLKE IRLEREDVAN NVDVLLKGGS
1101: SPPPPHHHHV HANDAAAATL AAAKATSASS ASSTSSTPPL CRQGGPSNSH SCSSSSFSAI YSSSNKAKSP FS

Best Arabidopsis Sequence Match ( AT3G24240.1 )
(BLAST)

0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E

Arabidopsis Description

RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.