Factsheet for TraesCS4D01G005000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G061100.1	Wheat	plastid	83.94	84.57
TraesCS2D01G013700.1	Wheat	plasma membrane	78.15	72.34
Os04t0132500-01	Rice	plasma membrane	72.08	67.31
Zm00001d025002_P001	Maize	plasma membrane	72.36	66.87
EES10396	Sorghum	plasma membrane	71.06	64.93
GSMUA_Achr8P12880_001	Banana	plasma membrane	39.59	60.83
GSMUA_Achr11P...	Banana	plasma membrane	39.5	58.43
CDY56672	Canola	cytosol	42.67	54.8
CDY19929	Canola	cytosol	42.3	54.25
VIT_07s0005g05420.t01	Wine grape	plasma membrane	49.02	53.74
VIT_05s0051g00540.t01	Wine grape	plasma membrane	55.46	52.06
TraesCS3D01G534900.1	Wheat	plasma membrane	48.27	51.14
Solyc09g091400.2.1	Tomato	plasma membrane	53.59	50.93
Bra036154.1-P	Field mustard	plasma membrane	53.41	50.75
PGSC0003DMT400040886	Potato	plasma membrane	53.31	50.58
Solyc09g061940.1.1	Tomato	plasma membrane	52.94	50.27
KRH75100	Soybean	plasma membrane, plastid	51.73	49.82
CDX77472	Canola	plasma membrane	52.66	49.78
Bra014998.1-P	Field mustard	plasma membrane	52.57	49.69
CDX85146	Canola	plasma membrane	50.98	49.46
KRH46804	Soybean	plasma membrane	53.22	49.44
AT5G48940.1	Thale cress	plasma membrane	52.38	49.43
KRG99860	Soybean	plasma membrane	52.75	49.22
AT3G24240.1	Thale cress	plasma membrane	51.91	48.73
KRH70959	Soybean	plastid	51.54	48.46
PGSC0003DMT400076250	Potato	plasma membrane	53.59	46.67
TraesCS7D01G234800.2	Wheat	plasma membrane	45.38	44.3
TraesCS5D01G262400.1	Wheat	plasma membrane	44.35	43.38
TraesCS3D01G092600.1	Wheat	plasma membrane	44.26	42.63
TraesCS7D01G354700.1	Wheat	plasma membrane	42.2	42.28
TraesCS1D01G115400.1	Wheat	plasma membrane	43.7	42.24
PGSC0003DMT400076247	Potato	cytosol	6.26	38.73
TraesCS2D01G252000.1	Wheat	plasma membrane	36.88	35.81
TraesCS5D01G417400.1	Wheat	plasma membrane	34.08	35.27
TraesCS4D01G235800.1	Wheat	plasma membrane	32.77	35.21
TraesCS4D01G088400.1	Wheat	plasma membrane	33.52	35.2
TraesCS6D01G033300.1	Wheat	plasma membrane	33.8	35.18
TraesCS2D01G255900.1	Wheat	plastid	34.08	34.27
TraesCS2D01G359100.1	Wheat	plasma membrane	35.29	34.21
TraesCS1D01G452700.1	Wheat	plasma membrane	33.89	34.05
TraesCS4D01G307500.1	Wheat	plasma membrane	32.77	33.95
TraesCS7D01G302400.1	Wheat	plastid	32.87	32.77
TraesCS7D01G521200.1	Wheat	plasma membrane	32.77	31.74
TraesCS5D01G517500.1	Wheat	plasma membrane, vacuole	21.66	31.52
TraesCS7D01G206800.1	Wheat	plasma membrane	32.77	31.51
TraesCS5D01G218500.1	Wheat	plasma membrane	33.15	30.98
TraesCS2D01G088000.1	Wheat	plasma membrane	32.77	30.55
TraesCS7D01G150200.2	Wheat	plasma membrane	31.75	30.3
TraesCS2D01G233800.1	Wheat	plasma membrane	34.83	29.49
TraesCS2D01G359000.1	Wheat	endoplasmic reticulum, golgi	0.56	1.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G005000	EnsemblPlants:TraesCS4D01G005000.1	SEG:seg

Description

No Description!

Coordinates

chr4D:+:2955007..2958305

Molecular Weight (calculated)

113346.0 Da

IEP (calculated)

7.701

GRAVY (calculated)

0.246

Length

1071 amino acids

Sequence
(BLAST)

0001: MPLFRSPPVT TTSPMHHHHL VFLPTLLLVV VHFICAAASS STSPNTEVAF LFSWLGTSPA RPPDWSPASA TPCRWSHVGC DAAGAAVTSI TFQSVHLAVP
0101: LTAGLCAALP GLLSFIVSKA NLTGGIPEDL ALCRRLAVLD LSDNSLTGPV PASLGNLTAS LKNLLLFDNR LSGELPASLG GLRLLESFRA GGNSDLSGPI
0201: PDSFSKLSSL VVLGLAETKI SGPLRPSLGA LKSLQTLFLD NTMLSGSIPP ELAQCSNLIG VYLYQNALSG PIPPELGALP RLQYLLLWGN ALTGHIPESF
0301: GNLTSLVALD LSINSISGSI PAALGRLAEL QELRLTGNNL TGTIPVQLAN ATAIMRLQLD ANEISGLIPP ELGRSLPNLQ VLYAWQNRLE GAIPATLVSM
0401: ASLQGLDLSY NHLTGFIPPG LFLLRNLTRL MLMSNELSGV IPPEIGKAAS LVRLRLSGNH ITGVIPAAVG GMNSIVFLDL ASNRLTGPVP AELGNCSQLQ
0501: MLDLRNNTIT GALPESLAGV HDLQKLDVSH NQFVGVVPKS FGKLAALSRL VLANNALSGS IPAALGRCHA LELLDLSDNR LSGGIPDELC GLSGLGIALN
0601: LSHNNLTGAI PARISELSRL SVLDLSYNAF AGSLEPLARM DNLVTLNVSR NNFSGHLPDT KLFRQLPASS LAGNPGLCTK GGDVCFAVDA DGRPITHRVH
0701: GLKLAVALPV TATVAIVLGM MGILLRAREV GGKVGGSDSE AGVVELGWPW QFMPFQKVSL SVDQVVRSLV DANIIGKGVS GVVYRVSLIS GETVAVKKLW
0801: PAATCNNAGR DSFTAEVRTL GSIRHRNIVR FLGCCCNRST RERLLMYDYM ANGSLGAVLH KRQDHGGGAV QLEWDVRYQI VLDSAQGLAY LHHGCSPPIV
0901: HRDIKANNIL IGLDFKAYIA DFGLAKLVHN GADFSRSSYS IAGSCGYIAP EYGHLLKITE KSDVYSYGVV MLEVLTGKHP IDPTIPDGLH VVDWVRQHKG
1001: GAGVLDPALQ GQSKTEVEEM LWVMGVAMLC VNAIPDQRPA MKDVVAMLGI FRSSTRSTPS STSGSRTLSA Q

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.