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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19929 Canola cytosol 97.72 97.6
AT5G48940.1 Thale cress plasma membrane 89.93 66.08
VIT_07s0005g05420.t01 Wine grape plasma membrane 66.91 57.11
PGSC0003DMT400040886 Potato plasma membrane 68.94 50.93
Solyc09g061940.1.1 Tomato plasma membrane 68.82 50.89
GSMUA_Achr8P12880_001 Banana plasma membrane 40.65 48.64
KRH46804 Soybean plasma membrane 66.91 48.4
KRG99860 Soybean plasma membrane 66.43 48.26
CDX77472 Canola plasma membrane 63.43 46.69
CDX85146 Canola plasma membrane 61.03 46.11
GSMUA_Achr11P... Banana plasma membrane 38.85 44.75
Os04t0132500-01 Rice plasma membrane 61.51 44.73
Zm00001d025002_P001 Maize plasma membrane 61.51 44.26
EES10396 Sorghum plasma membrane 61.63 43.86
TraesCS2D01G013700.1 Wheat plasma membrane 60.67 43.73
TraesCS2A01G012900.1 Wheat plasma membrane 60.79 43.44
TraesCS2B01G005000.1 Wheat plasma membrane 60.67 43.43
CDX94319 Canola cytosol 47.24 42.73
TraesCS4D01G005000.1 Wheat plasma membrane 54.8 42.67
CDX89328 Canola cytosol 46.88 42.41
HORVU0Hr1G001770.1 Barley mitochondrion, plasma membrane, plastid 49.64 41.28
TraesCSU01G061100.1 Wheat plastid 50.12 39.32
CDY17379 Canola plasma membrane 47.12 36.15
CDY28619 Canola plasma membrane 46.04 36.02
TraesCS3D01G534900.1 Wheat plasma membrane 43.17 35.61
CDY28391 Canola plasma membrane 44.72 34.83
CDX98665 Canola cytosol, nucleus, plasma membrane 34.77 34.36
CDX93999 Canola cytosol, nucleus, plasma membrane 34.77 34.36
CDX73290 Canola plasma membrane 44.6 33.88
CDY54567 Canola cytosol, plasma membrane, plastid 34.05 33.65
CDX89518 Canola cytosol 0.48 33.33
CDY31445 Canola cytosol, plasma membrane, plastid 33.33 32.94
CDY02112 Canola plasma membrane 34.05 29.31
CDY23037 Canola plasma membrane 33.93 29.27
CDY35204 Canola plasma membrane 34.89 28.96
CDY45620 Canola plasma membrane 33.69 28.88
CDY08759 Canola plasma membrane 33.57 28.84
CDY37749 Canola plasma membrane 32.01 28.68
CDY62258 Canola plasma membrane 29.62 28.36
CDY23764 Canola plasma membrane 35.97 28.17
CDY26259 Canola plastid 36.09 27.9
CDY38373 Canola plasma membrane 32.13 27.86
CDY23065 Canola plasma membrane 33.81 27.76
CDY66353 Canola plasma membrane 28.54 27.71
CDY31136 Canola plasma membrane 33.81 27.65
CDX97498 Canola plasma membrane 33.57 27.42
CDY65166 Canola plasma membrane 33.57 27.26
CDY48481 Canola plasma membrane 35.97 27.08
CDY02141 Canola plasma membrane 28.66 26.82
CDX73202 Canola plasma membrane 31.3 26.44
CDX87661 Canola plasma membrane 30.58 26.42
CDY59496 Canola plasma membrane 31.77 25.98
CDX68246 Canola plasma membrane 33.33 25.2
CDY11130 Canola plasma membrane 31.06 25.05
CDX73169 Canola plasma membrane 25.78 24.02
CDY37560 Canola plasma membrane 27.82 23.84
CDY14942 Canola plasma membrane 35.25 23.65
CDY68314 Canola plasma membrane 25.78 23.65
CDX96976 Canola plasma membrane 35.13 23.57
CDY06535 Canola plasma membrane 41.85 22.16
CDX72170 Canola plasma membrane 23.5 22.02
CDY27242 Canola plasma membrane 23.38 21.76
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.8.2MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078J0N2
UniProt:A0A078J0N2EnsemblPlants:CDY56672ProteinID:CDY56672ProteinID:CDY56672.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00019902001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00069PFAM:PF00560PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF290InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SMART:SM00369SUPFAM:SSF52047SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0004EEB6BBSEG:seg::::
Description
BnaCnng30900DBnaCnng30900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0N2]
Coordinates
chrLK033510:+:11091..14346
Molecular Weight (calculated)
90624.2 Da
IEP (calculated)
5.341
GRAVY (calculated)
-0.023
Length
834 amino acids
Sequence
(BLAST)
001: MLSGEIPKEL GNCSELINMF LYDNGLSGTL PRELGTIPMS FGNLSNLQEL MLSSNNITGS IPSVLSNCTR LVQLQIDANQ ISGLIPPEIG LLKELNIFLG
101: WQNKLEGNIP TELAGCQNLQ ALDLSQNLLT GALPPGLFQL RNLTKLLLIS NSISGVIPPE IGSCTSLVRL RLVNNKITGE IPREIGLLQN LSFLDLSENS
201: LSGPVPWEIS NCLQLQMLNL SNNTLRGSLP LSLSSLTKLQ VLDVSSNDLT GKLPDSLGQL LSLNRLILSK NSFNGEIPPS LGHCMNLQLL DLSSNNISGG
301: IPEELFDIQD LDIALNLSWN SLDGSIPARI SALNRLSVLD ISHNMLSGDL FALSGLENLV SLNISHNRFS GYLPDSKVFR QLVAEEMEGN SGLCSKGIRS
401: CFVSNSTLLN TQHGGDFAHS QRLKIAIGLL ISVTAVLAVL GVLAVLRARQ MIQEGNDSEK GENLWTWQFT PFQKLSFTVE HVLKCLVEGN VIGKGCSGVV
501: YRAEMPNQEV IAVKKLWPVT VTVAKTSGGR DSFSAEVKTL GSIRHKNIVR FLGCCWNKNT RLLMYDYMSN GSLGSLLHAR SGECSLGWEV RYKIILGAAQ
601: GLAYLHHDCV PPIVHRDIKA NNILIGPDFE PYIGDFGLAK LVDDGDFARS SKTIAGSYGY IAPEYGYSMK ITEKSDVYSY GVVVLEVLTG KEPIDPTIPD
701: GLHIVDWVKK IRDIQVIDQG LQARPESEVE EVMQTLGVAL LCVNPIPEDR PTMKDVAAML SEIRQEREEP MKGGGNNGCS GSCNNNGEGR DESLSSSTMQ
801: QTAKYLRSSS TSFSASSLLY SSSSSTSNAR PNLK
Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)
0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK
Arabidopsis Description
RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.