CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28391	Canola	plasma membrane	93.81	96.17
AT1G34110.1	Thale cress	extracellular, plasma membrane	87.98	90.11
VIT_18s0001g02590.t01	Wine grape	plastid	64.12	75.13
PGSC0003DMT400064535	Potato	plasma membrane	73.41	74.08
KRH35050	Soybean	plasma membrane	72.77	73.91
KRG91721	Soybean	plasma membrane	72.59	73.86
PGSC0003DMT400059664	Potato	plasma membrane	70.49	71.8
Solyc12g056730.1.1	Tomato	plasma membrane, vacuole	70.22	71.59
GSMUA_Achr2P15820_001	Banana	plasma membrane	55.1	69.78
TraesCS7B01G260400.1	Wheat	plasma membrane	65.21	66.98
Os06t0589800-01	Rice	extracellular	65.12	66.7
TraesCS7A01G368200.1	Wheat	plasma membrane	64.85	66.6
TraesCS7D01G354700.1	Wheat	plasma membrane	64.75	66.51
EER89985	Sorghum	plasma membrane	64.94	66.26
Zm00001d046485_P001	Maize	plasma membrane	64.75	65.89
HORVU7Hr1G085600.1	Barley	plasma membrane	64.12	65.43
GSMUA_Achr10P...	Banana	plastid	43.08	63.07
CDY19929	Canola	cytosol	34.15	44.91
CDY56672	Canola	cytosol	33.88	44.6
CDX89328	Canola	cytosol	37.25	44.36
CDX94319	Canola	cytosol	37.07	44.14
CDY28619	Canola	plasma membrane	42.81	44.09
CDX85146	Canola	plasma membrane	44.08	43.84
CDY17379	Canola	plasma membrane	43.17	43.61
CDX77472	Canola	plasma membrane	44.99	43.6
CDX89518	Canola	cytosol	0.46	41.67
CDX98665	Canola	cytosol, nucleus, plasma membrane	31.42	40.88
CDX93999	Canola	cytosol, nucleus, plasma membrane	31.42	40.88
CDY54567	Canola	cytosol, plasma membrane, plastid	31.15	40.52
CDY31445	Canola	cytosol, plasma membrane, plastid	30.6	39.81
CDY45620	Canola	plasma membrane	34.06	38.44
CDY08759	Canola	plasma membrane	33.88	38.31
CDY02112	Canola	plasma membrane	33.79	38.29
CDY23037	Canola	plasma membrane	33.42	37.95
CDY26259	Canola	plastid	37.07	37.72
CDY48481	Canola	plasma membrane	37.7	37.36
CDY62258	Canola	plasma membrane	29.6	37.31
CDY66353	Canola	plasma membrane	29.14	37.25
CDY02141	Canola	plasma membrane	30.15	37.15
CDX87661	Canola	plasma membrane	32.51	36.99
CDY37560	Canola	plasma membrane	32.42	36.59
CDY68314	Canola	plasma membrane	30.24	36.52
CDX73202	Canola	plasma membrane	32.79	36.47
CDY37749	Canola	plasma membrane	30.87	36.41
CDY23764	Canola	plasma membrane	35.06	36.15
CDY23065	Canola	plasma membrane	33.15	35.83
CDY35204	Canola	plasma membrane	32.42	35.42
CDX97498	Canola	plasma membrane	32.51	34.97
CDY38373	Canola	plasma membrane	30.6	34.93
CDY31136	Canola	plasma membrane	32.24	34.71
CDY65166	Canola	plasma membrane	31.51	33.69
CDX73169	Canola	plasma membrane	27.32	33.52
CDY14942	Canola	plasma membrane	37.7	33.31
CDX96976	Canola	plasma membrane	37.52	33.15
CDY59496	Canola	plasma membrane	30.6	32.94
CDX68246	Canola	plasma membrane	32.97	32.82
CDY11130	Canola	plasma membrane	30.87	32.79
CDX72170	Canola	plasma membrane	24.5	30.22
CDY27242	Canola	plasma membrane	24.32	29.8
CDY06535	Canola	plasma membrane	41.44	28.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078C8Z4
EnsemblPlants:CDX73290	ProteinID:CDX73290	ProteinID:CDX73290.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00106363001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE9F11
SEG:seg	:	:	:	:	:

Description

BnaC05g28160D

Coordinates

chrLK031798:-:1022794..1026165

Molecular Weight (calculated)

119824.0 Da

IEP (calculated)

6.975

GRAVY (calculated)

0.070

Length

1098 amino acids

Sequence
(BLAST)

0001: MEKEPNHFTR LFPFNHFYII KRPSFDCCIK QLNLLFLILF LFGSWVSMAQ PTLSLSSDGQ ALLSLKRQSL SSSSSLFSSW DPQDKTPCSW YGITCSADNR
0101: VISVSIPDTF LNLSSIPDLS SLSSLQFLNL SSTNLSGLIP PSFGKLTHLR LLDLSSNALS GPIPSELGRL SSLQFLILNA NKLSGSIPSQ ISNLFSLQVL
0201: CLQDNLLNGS IPSSLGSLVS LQEFRLGGNP NLGGPIPAQI GLLKNLTTLG FAASGLSGSI PSTFGNLVNL QTLALYDTDV SGTIPPQLGL CSELRNLYLH
0301: MNKLTGSIPK ELGKLQKITS LLLWGNSLSG AIPPEISNCS SLVVFDVSAN DLSGEIPGDL GKLVWLEQLQ LSDNMFTGHI PWEISNCSSL IALQLDKNKL
0401: SGSIPSQIGN LKSLQSFFLW ENSVSGTIPS SFGNCTDLVA LDLSRNKLTG RIPEELFSLK RLSKLLLLGN SLSGGLPKSV AKCQSLVRLR LGENQLSGQV
0501: PKEIGELQNL VFLDLYMNHF SGGLPYEISN ITVLELLDVH NNYITGDIPG QLGNLVNLEQ LDLSRNSFTG NIPLSFGNFS YLNKLILNNN LLTGQIPKSI
0601: KNLQKLTLLD LSFNSLSGEI PQELGQVTTL TINLDLSYNA LCGDIPQTFS GLTQLQSLDL SHNMLHGDIK VLGSLTSLAS LNISFNNFSG PIPATPLFKT
0701: ISASSYLQNT NLCHTMDGVT CSSHNGQRKS PKMVALVAVI LASITIALLA AWLLVLRNNH RYKTQKQTTT TTSTADDFSY PWTFIPFQKL GISVNNIVSS
0801: LTDENVIGKG CSGVVYRAAM PDGEMIAVKK LWRTKDNDDE PTTKIDSEIQ ILGSIRHRNI VKLLGYCSNK SVKLLLYNYF PNGNLQQLLQ GNRSLDWETR
0901: YKIAIGTAQG LAYLHHDCLP AILHRDVKCN NILLNSKYEA ILADFGLAKV MNSPNYHTAM SQVAGSYGYI APEYGYTMNI TEKSDVYSYG VVLLEILLGR
1001: SAVEPQIADG LHIVEWVKQK MGSFEPALSV LDVKLQGLPD QIVQEMLQTL GVAMFCVNSS PVERPTMKEV VALLTEVKCS PEEWGKTSQP LIKPSSSL

Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)

0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.