Factsheet for Solyc12g056730.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059664	Potato	plasma membrane	96.47	96.38
VIT_18s0001g02590.t01	Wine grape	plastid	69.73	80.15
KRH35050	Soybean	plasma membrane	76.42	76.13
KRG91721	Soybean	plasma membrane	76.14	76.0
GSMUA_Achr2P15820_001	Banana	plasma membrane	58.77	73.01
AT1G34110.1	Thale cress	extracellular, plasma membrane	72.14	72.48
Bra034446.1-P	Field mustard	plasma membrane	71.68	70.5
CDY28391	Canola	plasma membrane	70.01	70.4
CDX73290	Canola	plasma membrane	71.59	70.22
TraesCS7B01G260400.1	Wheat	plasma membrane	68.8	69.32
TraesCS7D01G354700.1	Wheat	plasma membrane	68.71	69.22
TraesCS7A01G368200.1	Wheat	plasma membrane	68.34	68.85
Os06t0589800-01	Rice	extracellular	68.25	68.56
EER89985	Sorghum	plasma membrane	68.43	68.49
HORVU7Hr1G085600.1	Barley	plasma membrane	67.41	67.47
Zm00001d046485_P001	Maize	plasma membrane	67.5	67.38
GSMUA_Achr10P...	Banana	plastid	44.94	64.53
Solyc04g064940.2.1	Tomato	plasma membrane	44.94	44.49
Solyc09g091400.2.1	Tomato	plasma membrane	44.94	42.95
Solyc09g061940.1.1	Tomato	plasma membrane	43.83	41.84
Solyc07g065860.2.1	Tomato	plasma membrane	41.97	41.77
Solyc03g112580.2.1	Tomato	plasma membrane	41.88	40.81
Solyc01g080770.2.1	Tomato	plasma membrane	33.8	37.92
Solyc04g081590.2.1	Tomato	plasma membrane	34.45	37.63
Solyc07g056410.2.1	Tomato	plasma membrane	38.53	37.42
Solyc02g091840.2.1	Tomato	extracellular	35.1	37.2
Solyc01g103530.2.1	Tomato	plasma membrane	34.35	37.19
Solyc12g098100.1.1	Tomato	plasma membrane	37.7	37.01
Solyc05g051640.2.1	Tomato	plasma membrane	34.35	36.56
Solyc09g091260.2.1	Tomato	plasma membrane	37.33	36.28
Solyc04g050170.2.1	Tomato	plasma membrane	33.52	35.67
Solyc09g064520.2.1	Tomato	plasma membrane	33.15	35.0
Solyc03g093330.2.1	Tomato	vacuole	31.2	34.22
Solyc03g123860.2.1	Tomato	plasma membrane	34.73	33.88
Solyc03g082470.2.1	Tomato	plasma membrane	32.78	31.66
Solyc03g082450.2.1	Tomato	plasma membrane	32.68	31.57
Solyc07g005010.2.1	Tomato	plasma membrane	28.04	31.49

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K4DG04	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27000	PANTHER:PTHR27000:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g056730.1
EnsemblPlants:Solyc12g056730.1.1	TMHMM:TMhelix	UniParc:UPI000276A04B	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:62812807..62816470

Molecular Weight (calculated)

117940.0 Da

IEP (calculated)

5.784

GRAVY (calculated)

0.085

Length

1077 amino acids

Sequence
(BLAST)

0001: MTTLSYFFII FFFLLSSLSP RRVNSLSSDG KALLSLLKAT YDPYAKSSSF VLPSWNASTS TPCSWQGISC SPQQRVISVS IPNTFLNLSS FPFELFSLTS
0101: LQLLNLSSTN ISGSIPSSFG LFTHLRLLDL SSNSLSGPVP SELGGLTSLQ FLFLNSNRLS GRIPYQLANL SSLEILCLQD NLLNGSIPKD LGSLVSLQQL
0201: RIGGNPELSG EIPAELGMLT NLTTFGVAAT GLSGVIPHTF GNLISLQTLA VYDTEVFGSI PPELGMCSEL RNLYLHMNKL TGPIPRQLGK LKKINSLLLW
0301: GNLLTGPVPA ELSNCSSLVV LDVSANDLSG EIPGDLGKLE VLEQLHLSDN ALSGAIPMQL SNCSSLTALQ LDKNLLSGTI PEQVGELRHL QIFLLWENSV
0401: SGTIPAAFGN CTELYSLDLS RNNLTGSIPE EIFSLKKLSR LLLLGNSLTG RLSPSVAKCQ SLVRLRLGEN QFSGPIPEEI GQLQNLVFLD LYMNHFSGEL
0501: PSEIANITVL ELLDVHNNYL TGEIPSSLGE LVNLEQLDLS KNSFTGEIPW SFGNLSYLNK LILRDNLLTG PIPKSFSNLQ KLTLLDLSSN SLSGAISPEI
0601: GYMTSLTISL DLSSNRFTGE LPETLSGLTL LQSLDISHNM LSGRITTLSL LTSLATLNIS YNNFSGPIPV TPSFRTLTSN SFLENSLLCE SIDGFTCSAH
0701: ITRRNRLKSS KSISLVAVIL TSVAITVVAT WYLVTRKYRY ESEKSPGMSV SAIGAEDFTY PWTFIPFQKL NCTVDNILDC LKDENIIGKG CSGVVYRAEM
0801: PNGELIAVKK LWKTKKDEEP VDSFAAEIQI LGHIRHRNIV KLLGYCSNKS VKLLLYNYIS NSNLQQLLQS NRNLDWEIRY KIAVGSAQGL AYLHHDCVPA
0901: ILHRDVKCNN ILLDSKFEAY LADFGLAKLM NSPNYHQAMS RVAGSYGYIA PEYGYTVNIT EKSDVYSYGV VLLEILSGRS AIEPQIGDGQ HIVEWVKKKM
1001: GSFEPAVTIL DSKLQSLPDQ MVQEMLQTLG IAMFCVNSSP TERPTMKEVV TLLMEVKNPT EEFGKTSQPL INQSTQS

Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)

0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.