Factsheet for Solyc02g091840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078706	Potato	plasma membrane	97.64	97.54
VIT_00s1353g00010.t01	Wine grape	plasma membrane	79.72	79.65
KRH77190	Soybean	plasma membrane	76.18	76.48
KRH28297	Soybean	plasma membrane	76.08	76.38
AT5G65700.1	Thale cress	plasma membrane	75.2	76.17
CDY45620	Canola	plasma membrane	72.74	75.95
KRH04350	Soybean	plasma membrane	75.49	75.94
CDY08759	Canola	plasma membrane	72.44	75.8
KRH58184	Soybean	plasma membrane	75.0	75.6
Bra024413.1-P	Field mustard	plasma membrane, plastid	73.92	75.33
CDY23037	Canola	plasma membrane	71.26	74.87
CDY02112	Canola	plasma membrane	70.28	73.68
GSMUA_Achr4P14590_001	Banana	cytosol	51.77	73.46
AT3G49670.1	Thale cress	plasma membrane	72.44	73.45
Bra012925.1-P	Field mustard	plasma membrane	71.56	73.21
Os03t0773700-01	Rice	plasma membrane	63.19	72.54
GSMUA_Achr4P03140_001	Banana	plasma membrane	54.33	72.35
HORVU5Hr1G098840.2	Barley	cytosol, plasma membrane	62.3	71.77
GSMUA_Achr5P02010_001	Banana	plasma membrane, vacuole	50.49	69.8
EER93376	Sorghum	plasma membrane	70.28	69.32
GSMUA_Achr4P07370_001	Banana	plasma membrane	52.85	68.58
Zm00001d034240_P004	Maize	plasma membrane	69.78	68.5
HORVU2Hr1G061090.3	Barley	plasma membrane, plastid	64.96	68.39
GSMUA_Achr4P32160_001	Banana	plasma membrane	50.1	67.96
Os07t0134200-01	Rice	plasma membrane	68.01	67.55
Zm00001d013162_P001	Maize	plasma membrane	68.31	67.51
TraesCS5B01G412400.1	Wheat	plasma membrane	68.01	67.02
TraesCS5D01G417400.1	Wheat	plasma membrane	68.21	66.96
TraesCS2B01G266700.1	Wheat	plasma membrane	67.22	66.76
EER97948	Sorghum	plasma membrane	67.62	66.63
TraesCS5A01G407500.2	Wheat	plasma membrane	67.72	66.6
GSMUA_Achr7P00790_001	Banana	plasma membrane	50.98	66.33
TraesCS2A01G268300.1	Wheat	vacuole	66.44	65.98
Zm00001d018752_P001	Maize	mitochondrion, plasma membrane	67.13	65.77
GSMUA_Achr7P27590_001	Banana	golgi, plasma membrane	39.17	64.19
TraesCS2D01G255900.1	Wheat	plastid	66.73	63.66
HORVU4Hr1G065620.1	Barley	plasma membrane	60.93	62.21
TraesCS4D01G235800.1	Wheat	plasma membrane	60.73	61.89
TraesCS4A01G059000.1	Wheat	plasma membrane	60.63	61.79
GSMUA_Achr3P30640_001	Banana	plasma membrane	50.0	61.73
TraesCS4B01G234600.1	Wheat	plasma membrane	60.53	61.69
Os03t0228800-01	Rice	plasma membrane	60.63	61.17
KXG39823	Sorghum	plasma membrane	60.14	61.04
Zm00001d028317_P001	Maize	plasma membrane	60.43	59.44
Solyc01g103530.2.1	Tomato	plasma membrane	53.15	54.27
Solyc01g080770.2.1	Tomato	plasma membrane	51.18	54.17
Solyc04g081590.2.1	Tomato	plasma membrane	49.61	51.12
Solyc05g051640.2.1	Tomato	plasma membrane	39.96	40.12
Solyc09g064520.2.1	Tomato	plasma membrane	40.16	40.0
Solyc04g050170.2.1	Tomato	plasma membrane	39.67	39.82
Solyc03g093330.2.1	Tomato	vacuole	38.48	39.82
Solyc09g091260.2.1	Tomato	plasma membrane	38.68	35.47
Solyc12g098100.1.1	Tomato	plasma membrane	38.19	35.37
Solyc12g056730.1.1	Tomato	plasma membrane, vacuole	37.2	35.1
Solyc07g056410.2.1	Tomato	plasma membrane	37.99	34.81
Solyc04g064940.2.1	Tomato	plasma membrane	36.71	34.28
Solyc07g005010.2.1	Tomato	plasma membrane	31.79	33.68
Solyc09g061940.1.1	Tomato	plasma membrane	36.71	33.07
Solyc03g112580.2.1	Tomato	plasma membrane	35.53	32.67
Solyc09g091400.2.1	Tomato	plasma membrane	35.83	32.3
Solyc07g065860.2.1	Tomato	plasma membrane	33.37	31.33
Solyc03g123860.2.1	Tomato	plasma membrane	32.97	30.34
Solyc03g082470.2.1	Tomato	plasma membrane	32.78	29.87
Solyc03g082450.2.1	Tomato	plasma membrane	31.0	28.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:AB645823	EMBL:AB645826
ncoils:Coil	UniProt:F8WS84	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27000	PANTHER:PTHR27000:SF49	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g091840.2	EnsemblPlants:Solyc02g091840.2.1
TMHMM:TMhelix	UniParc:UPI0002185FF8	SEG:seg	:	:	:

Description

Leucine rich repeat receptor protein kinase CLAVATA1 [Source:UniProtKB/TrEMBL;Acc:F8WS84]

Coordinates

chr2:+:53071027..53075117

Molecular Weight (calculated)

111162.0 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.068

Length

1016 amino acids

Sequence
(BLAST)

0001: MRLLFFLLLL MHFTDFSAGK QPRLPEYQAL LALKTAITDD PQLTLASWNI STSHCTWNGV TCDTHRHVTS LDISGFNLTG TLPPEVGNLR FLQNLSVAVN
0101: QFTGPVPVEI SFIPNLSYLN LSNNIFGMEF PSQLTRLRNL QVLDLYNNNM TGELPVEVYQ MTKLRHLHLG GNFFSGRIPP EYGRFPSLEY LAVSGNALVG
0201: EIPPEIGNIA TLQQLYVGYY NTFTGGIPPA IGNLSQLLRF DAANCGLSGK IPPEIGKLQN LDTLFLQVNS LSGSLTPEIG YLKSLKSLDL SNNMFSGEIP
0301: PTFAELKNIT LVNLFRNKLY GSIPEFIEDL PELEVLQLWE NNFTGSIPQG LGTKSKLKTL DLSSNKLTGN LPPNMCSGNN LQTIITLGNF LFGPIPESLG
0401: RCESLNRIRM GENYLNGSIP KGLLSLPHLS QVELQNNILT GTFPDISSKS NSLGQIILSN NRLTGPLPPS IGNFAVAQKL LLDGNKFSGR IPAEIGKLQQ
0501: LSKIDFSHNN LSGPIAPEIS QCKLLTYVDL SRNQLSGEIP TEITGMRILN YLNLSRNHLV GSIPAPISSM QSLTSVDFSY NNFSGLVPGT GQFSYFNYTS
0601: FLGNPDLCGP YLGPCKEGVV DGVSQPHQRG ALTPSMKLLL VIGLLVCSIV FAVAAIIKAR SLKKASEARA WKLTAFQRLD FTCDDILDSL KEDNVIGKGG
0701: AGIVYKGVMP SGEHVAVKRL PAMSRGSSHD HGFNAEIQTL GRIRHRHIVR LLGFCSNHET NLLVYEYMPN GSLGEMLHGK KGGHLHWDTR YKIALESAKG
0801: LCYLHHDCSP LILHRDVKSN NILLDSSFEA HVADFGLAKF LQDSGTSECM SAIAGSYGYI APEYAYTLKV DEKSDVYSFG VVLLELVSGK KPVGEFGDGV
0901: DIVQWVRKMT DGKKDGVLKI LDPRLSTVPL NEVMHVFYVA LLCVEEQAVE RPTMREVVQI LTELPKPPGA KSDDSTVTDQ SPPSASALES PTSIPGDTKD
1001: HHQPTPQSPP PDLLSI

Best Arabidopsis Sequence Match ( AT5G65700.1 )
(BLAST)

0001: MKLFLLLLFL LHISHTFTAS RPISEFRALL SLKTSLTGAG DDKNSPLSSW KVSTSFCTWI GVTCDVSRRH VTSLDLSGLN LSGTLSPDVS HLRLLQNLSL
0101: AENLISGPIP PEISSLSGLR HLNLSNNVFN GSFPDEISSG LVNLRVLDVY NNNLTGDLPV SVTNLTQLRH LHLGGNYFAG KIPPSYGSWP VIEYLAVSGN
0201: ELVGKIPPEI GNLTTLRELY IGYYNAFEDG LPPEIGNLSE LVRFDGANCG LTGEIPPEIG KLQKLDTLFL QVNVFSGPLT WELGTLSSLK SMDLSNNMFT
0301: GEIPASFAEL KNLTLLNLFR NKLHGEIPEF IGDLPELEVL QLWENNFTGS IPQKLGENGK LNLVDLSSNK LTGTLPPNMC SGNKLETLIT LGNFLFGSIP
0401: DSLGKCESLT RIRMGENFLN GSIPKGLFGL PKLTQVELQD NYLSGELPVA GGVSVNLGQI SLSNNQLSGP LPPAIGNFTG VQKLLLDGNK FQGPIPSEVG
0501: KLQQLSKIDF SHNLFSGRIA PEISRCKLLT FVDLSRNELS GEIPNEITAM KILNYLNLSR NHLVGSIPGS ISSMQSLTSL DFSYNNLSGL VPGTGQFSYF
0601: NYTSFLGNPD LCGPYLGPCK DGVAKGGHQS HSKGPLSASM KLLLVLGLLV CSIAFAVVAI IKARSLKKAS ESRAWRLTAF QRLDFTCDDV LDSLKEDNII
0701: GKGGAGIVYK GVMPNGDLVA VKRLAAMSRG SSHDHGFNAE IQTLGRIRHR HIVRLLGFCS NHETNLLVYE YMPNGSLGEV LHGKKGGHLH WDTRYKIALE
0801: AAKGLCYLHH DCSPLIVHRD VKSNNILLDS NFEAHVADFG LAKFLQDSGT SECMSAIAGS YGYIAPEYAY TLKVDEKSDV YSFGVVLLEL VTGRKPVGEF
0901: GDGVDIVQWV RKMTDSNKDS VLKVLDPRLS SIPIHEVTHV FYVAMLCVEE QAVERPTMRE VVQILTEIPK LPPSKDQPMT ESAPESELSP KSGVQSPPDL
1001: LNL

Arabidopsis Description

BAM1Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Source:UniProtKB/Swiss-Prot;Acc:O49545]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.