Factsheet for GSMUA_Achr4P32160_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02010_001	Banana	plasma membrane, vacuole	56.88	57.96
GSMUA_Achr4P14590_001	Banana	cytosol	53.94	56.42
GSMUA_Achr7P00790_001	Banana	plasma membrane	58.08	55.7
GSMUA_Achr7P27590_001	Banana	golgi, plasma membrane	44.33	53.55
CDY02112	Canola	plasma membrane	67.96	52.53
Bra012925.1-P	Field mustard	plasma membrane	69.29	52.27
CDY23037	Canola	plasma membrane	67.42	52.22
GSMUA_Achr4P03140_001	Banana	plasma membrane	53.14	52.16
Bra024413.1-P	Field mustard	plasma membrane, plastid	69.03	51.86
VIT_00s1353g00010.t01	Wine grape	plasma membrane	70.09	51.62
CDY45620	Canola	plasma membrane	67.02	51.59
AT5G65700.1	Thale cress	plasma membrane	69.03	51.55
CDY08759	Canola	plasma membrane	66.76	51.49
KRH77190	Soybean	plasma membrane	69.56	51.48
KRH58184	Soybean	plasma membrane	68.76	51.09
KRH04350	Soybean	plasma membrane	68.89	51.09
AT3G49670.1	Thale cress	plasma membrane	68.09	50.9
KRH28297	Soybean	plasma membrane	68.76	50.89
EER93376	Sorghum	plasma membrane	69.96	50.87
Zm00001d034240_P004	Maize	plasma membrane	70.23	50.82
PGSC0003DMT400043020	Potato	plasma membrane	69.16	50.68
Os07t0134200-01	Rice	plasma membrane	68.89	50.44
Os03t0773700-01	Rice	plasma membrane	59.28	50.17
Solyc02g091840.2.1	Tomato	extracellular	67.96	50.1
HORVU2Hr1G061090.3	Barley	plasma membrane, plastid	64.49	50.05
Zm00001d013162_P001	Maize	plasma membrane	68.62	50.0
PGSC0003DMT400078706	Potato	plasma membrane	67.82	49.95
HORVU5Hr1G098840.2	Barley	cytosol, plasma membrane	58.61	49.77
TraesCS5B01G412400.1	Wheat	plasma membrane	68.22	49.56
EER97948	Sorghum	plasma membrane	68.22	49.56
TraesCS5A01G407500.2	Wheat	plasma membrane	68.09	49.37
TraesCS5D01G417400.1	Wheat	plasma membrane	68.09	49.28
Zm00001d018752_P001	Maize	mitochondrion, plasma membrane	68.09	49.18
GSMUA_Achr4P07370_001	Banana	plasma membrane	51.13	48.91
TraesCS2A01G268300.1	Wheat	vacuole	66.49	48.68
TraesCS2B01G266700.1	Wheat	plasma membrane	66.49	48.68
TraesCS2D01G255900.1	Wheat	plastid	66.76	46.95
GSMUA_Achr6P22870_001	Banana	plasma membrane	42.99	45.35
TraesCS4D01G235800.1	Wheat	plasma membrane	59.81	44.93
Os03t0228800-01	Rice	plasma membrane	60.21	44.79
TraesCS4B01G234600.1	Wheat	plasma membrane	59.55	44.73
HORVU4Hr1G065620.1	Barley	plasma membrane	59.41	44.72
TraesCS4A01G059000.1	Wheat	plasma membrane	59.41	44.63
GSMUA_Achr3P30640_001	Banana	plasma membrane	48.33	43.99
KXG39823	Sorghum	plasma membrane	58.74	43.96
GSMUA_Achr9P24170_001	Banana	plasma membrane	47.4	43.56
Zm00001d028317_P001	Maize	plasma membrane	58.61	42.5
GSMUA_Achr9P00190_001	Banana	plasma membrane	43.79	42.49
GSMUA_Achr8P27460_001	Banana	plasma membrane	40.85	40.0
GSMUA_Achr3P16610_001	Banana	plasma membrane	40.59	39.69
GSMUA_Achr5P16960_001	Banana	plasma membrane	40.59	39.69
GSMUA_Achr8P29350_001	Banana	plasma membrane	36.18	38.88
GSMUA_Achr6P07350_001	Banana	plasma membrane	35.11	38.45
GSMUA_Achr4P04790_001	Banana	plasma membrane	35.78	31.98
GSMUA_Achr1P06510_001	Banana	cytosol	28.97	31.31
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	25.1	30.77
GSMUA_Achr2P04260_001	Banana	plasma membrane	31.51	29.99
GSMUA_Achr2P15820_001	Banana	plasma membrane	34.58	29.87
GSMUA_Achr11P...	Banana	plasma membrane	30.57	29.51
GSMUA_Achr1P03380_001	Banana	plasma membrane	29.51	29.35
GSMUA_Achr4P28370_001	Banana	plasma membrane	33.24	28.3
GSMUA_Achr4P25040_001	Banana	plasma membrane	33.64	27.75
GSMUA_Achr10P...	Banana	plastid	27.64	27.6
GSMUA_Achr3P10820_001	Banana	plasma membrane	31.11	27.32
GSMUA_Achr3P20720_001	Banana	plasma membrane	31.11	26.84
GSMUA_Achr8P12880_001	Banana	plasma membrane	24.43	26.26
GSMUA_Achr11P...	Banana	plasma membrane	24.83	25.69
GSMUA_Achr8P12800_001	Banana	plasma membrane	30.17	25.68
GSMUA_Achr9P19720_001	Banana	plasma membrane	30.04	25.66
GSMUA_Achr7P23450_001	Banana	plasma membrane, vacuole	23.23	23.14
GSMUA_Achr10P...	Banana	plasma membrane	29.37	22.73
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	23.9	22.4

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G32160_001	EnsemblPlants:GSMUA_Achr4P32160_001
EnsemblPlants:GSMUA_Achr4T32160_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0STX8	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF49	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF52047	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0002967A42
SEG:seg	:	:	:	:	:

Description

Putative Receptor protein kinase CLAVATA1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G32160_001]

Coordinates

chr4:+:29039424..29043374

Molecular Weight (calculated)

81045.9 Da

IEP (calculated)

5.707

GRAVY (calculated)

-0.054

Length

749 amino acids

Sequence
(BLAST)

001: MLLFYHLLLF VSLLSSPSTA ADDGAGYAEE HRALLSLKAQ LSDPGAALGP WDATTDHCSW PGVTCDDAGA VVSLDLSGRN LSGLLPPAVG RLRSLLRLSA
101: AANSFSGPIP SELALLPALR HLNLSNNIFN GSFPAPLARL ADLRLRHIHL GGNFFSGSIP PEYGSWQFLE YLAISGNELG GPIPPEIGNL SALRELYIGY
201: YNSYDGGLPP EIGNLSTLLR LDAANCGLSG RIPPEMGNLR NLDTLFLQLE VLQVWENNFT GSIPRRLGTN GRLQLLDLSS NKLTGRIRMG DNYLNGTIPQ
301: GLLSLPNLSQ VELQDNYLTG GFPDTGSSSI SPNLGQNSFT GKIPPEVGRL QQLSKLDLSS NRFSGPITPE VSKCKLLTFV DLSRNELSGD VPADFSYFNA
401: TSFAPSPPLS SSCSSSAFSS RLDFTCDDVL NCLKEENIIG KGGAGVVYKG VMPDGEQVAV KRLPAMSRGS SHDHGFNAEI QTLGRIRHRH IVRLLGFCSN
501: HETNLLVYEY MPNGSLGEAA KGLCYLHHDC SPLILHRDVK SNNILLDSNF EAHVADFGLA KFLQDTGTSE CMSAIAGSYG YIAPEYAYTL KVDEKSDVYS
601: FGVVLLELVT GRKPVGEFGD GVDIVQWVRK VTGSNKEEVT KILDPRLPTL PVHEAMHVFY VAMLCVEEQS VERPTMREVV QILTELPKPP LKQGEDSSSG
701: NTHLISANTE GVRPMASVPV SRNSRLCSQA DMVLVLVLVM KSLFLLSNG

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.