Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P26680_001 | |
| GSMUA_Achr9P24170_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G75820.1 | GSMUA_Achr3P26680_001 | AT1G75820.1 | 9294234 |
| AT1G75820.1 | GSMUA_Achr9P24170_001 | AT1G75820.1 | 9294234 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29398 | Soybean | cytosol | 46.32 | 44.78 |
| GSMUA_Achr9P24170_001 | Banana | plasma membrane | 48.45 | 36.32 |
| VIT_18s0001g14610.t01 | Wine grape | plasma membrane | 54.83 | 34.18 |
| Solyc04g081590.2.1 | Tomato | plasma membrane | 52.37 | 32.45 |
| PGSC0003DMT400025747 | Potato | plasma membrane | 51.72 | 32.18 |
| CDX73202 | Canola | plasma membrane | 51.39 | 31.81 |
| AT1G75820.1 | Thale cress | plasma membrane | 50.9 | 31.73 |
| KRH24413 | Soybean | plasma membrane | 50.41 | 31.21 |
| CDX87661 | Canola | plasma membrane | 49.1 | 31.09 |
| KRH29397 | Soybean | plasma membrane | 49.1 | 30.58 |
| GSMUA_Achr5P02010_001 | Banana | plasma membrane, vacuole | 35.02 | 29.12 |
| Bra015812.1-P | Field mustard | cytosol | 35.35 | 28.42 |
| GSMUA_Achr8P29350_001 | Banana | plasma membrane | 31.91 | 27.98 |
| GSMUA_Achr7P00790_001 | Banana | plasma membrane | 35.52 | 27.78 |
| GSMUA_Achr8P27460_001 | Banana | plasma membrane | 34.53 | 27.58 |
| GSMUA_Achr4P03140_001 | Banana | plasma membrane | 33.88 | 27.13 |
| GSMUA_Achr4P14590_001 | Banana | cytosol | 30.28 | 25.84 |
| GSMUA_Achr1P06510_001 | Banana | cytosol | 29.13 | 25.69 |
| GSMUA_Achr3P16610_001 | Banana | plasma membrane | 31.91 | 25.46 |
| GSMUA_Achr4P07370_001 | Banana | plasma membrane | 32.57 | 25.42 |
| GSMUA_Achr6P22870_001 | Banana | plasma membrane | 29.46 | 25.35 |
| GSMUA_Achr4P32160_001 | Banana | plasma membrane | 30.77 | 25.1 |
| GSMUA_Achr7P27590_001 | Banana | golgi, plasma membrane | 25.2 | 24.84 |
| GSMUA_Achr3P30640_001 | Banana | plasma membrane | 32.9 | 24.42 |
| GSMUA_Achr9P00190_001 | Banana | plasma membrane | 29.62 | 23.45 |
| GSMUA_Achr4P04790_001 | Banana | plasma membrane | 31.91 | 23.27 |
| GSMUA_Achr5P16960_001 | Banana | plasma membrane | 28.81 | 22.98 |
| GSMUA_Achr6P07350_001 | Banana | plasma membrane | 24.06 | 21.49 |
| GSMUA_Achr11P... | Banana | plasma membrane | 24.88 | 20.99 |
| GSMUA_Achr8P12880_001 | Banana | plasma membrane | 23.57 | 20.66 |
| GSMUA_Achr2P04260_001 | Banana | plasma membrane | 26.35 | 20.46 |
| GSMUA_Achr2P15820_001 | Banana | plasma membrane | 28.31 | 19.95 |
| GSMUA_Achr4P25040_001 | Banana | plasma membrane | 28.48 | 19.16 |
| GSMUA_Achr1P03380_001 | Banana | plasma membrane | 23.08 | 18.73 |
| GSMUA_Achr11P... | Banana | plasma membrane | 23.57 | 18.56 |
| GSMUA_Achr10P... | Banana | plastid | 22.75 | 18.53 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 23.57 | 18.02 |
| GSMUA_Achr3P20720_001 | Banana | plasma membrane | 25.53 | 17.97 |
| GSMUA_Achr4P28370_001 | Banana | plasma membrane | 25.53 | 17.73 |
| GSMUA_Achr7P23450_001 | Banana | plasma membrane, vacuole | 19.97 | 16.22 |
| GSMUA_Achr3P10820_001 | Banana | plasma membrane | 22.59 | 16.18 |
| GSMUA_Achr10P... | Banana | plasma membrane | 25.37 | 16.01 |
| GSMUA_Achr8P12800_001 | Banana | plasma membrane | 22.26 | 15.45 |
| GSMUA_Achr9P19720_001 | Banana | plasma membrane | 22.09 | 15.39 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P26680_001 | EnsemblPlants:GSMUA_Achr3T26680_001 | EnsemblPlantsGene:GSMUA_Achr3G26680_001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| PANTHER:PTHR27000 | PANTHER:PTHR27000:SF231 | PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF52058 | UniParc:UPI0002960FCD | UniProt:M0SI34 | MapMan:35.1 | : |
Description
Putative Receptor protein kinase CLAVATA1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26680_001]
Coordinates
chr3:-:26421430..26423328
Molecular Weight (calculated)
65147.4 Da
IEP (calculated)
5.033
GRAVY (calculated)
0.200
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCLGLLLVL SPLFLADSDG DGDHGALVKL KAALVGPGGS GLGDWAAASP DHCSFSGVTC DEDSHVVALN VSFVHLNGSL PPEIGLLRHL VNLTVSCAGL
101: GGSLPVELAA LPSLRLLNIS NSHFSGEFPK VEPGGFPALD VIDAYNNNIS GPLPLGLAAA PLLRYLHLGG NFFSGVIPEA YSDIPNLEYL GLNGNSLTGR
201: YEGGIPWEFG RLSSLVRLDM AGCRLSGTLP ASLGQLKRLD SLFLQINRLN GSIPPELGGL SQLEFLDFSI NELTGEIPES FAELKELKLL NLFMNHLRGI
301: IPPFIGELPS LVELKLFQNN FSSELPESLG MNGRLVTLDV ASNRITGTIP RDLCAGGRLE MLVLMDNGLV GPIPEKLGGC KSLTRVRLGK NSLNGSIPAG
401: LFDLPSNDML ELNDNNLSGE LPTVIAGDKL RLLILSNNSI TGSIPPAISN LSALERLELN INRMFGEIPP EIGRLKALAM INLSGNELTG EFPIDLAHCA
501: SLVSLDLSRN RLTGEIPVQI TALPILNTLK LSSNRFWGEI PPEILKMPSL TTLDLSNNCR PNLLSSETSL MKLDFSVSCT AGATPRGARR TGGRSRLALL
601: TSLFPLLLFN C
101: GGSLPVELAA LPSLRLLNIS NSHFSGEFPK VEPGGFPALD VIDAYNNNIS GPLPLGLAAA PLLRYLHLGG NFFSGVIPEA YSDIPNLEYL GLNGNSLTGR
201: YEGGIPWEFG RLSSLVRLDM AGCRLSGTLP ASLGQLKRLD SLFLQINRLN GSIPPELGGL SQLEFLDFSI NELTGEIPES FAELKELKLL NLFMNHLRGI
301: IPPFIGELPS LVELKLFQNN FSSELPESLG MNGRLVTLDV ASNRITGTIP RDLCAGGRLE MLVLMDNGLV GPIPEKLGGC KSLTRVRLGK NSLNGSIPAG
401: LFDLPSNDML ELNDNNLSGE LPTVIAGDKL RLLILSNNSI TGSIPPAISN LSALERLELN INRMFGEIPP EIGRLKALAM INLSGNELTG EFPIDLAHCA
501: SLVSLDLSRN RLTGEIPVQI TALPILNTLK LSSNRFWGEI PPEILKMPSL TTLDLSNNCR PNLLSSETSL MKLDFSVSCT AGATPRGARR TGGRSRLALL
601: TSLFPLLLFN C
001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
Arabidopsis Description
CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.