Factsheet for Bra015812.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015812.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	Bra015812.1-P	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87661	Canola	plasma membrane	96.71	76.17
CDX73202	Canola	plasma membrane	98.29	75.68
AT1G75820.1	Thale cress	plasma membrane	89.74	69.59
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	54.87	55.09
VIT_18s0001g14610.t01	Wine grape	plasma membrane	70.92	55.0
PGSC0003DMT400025747	Potato	plasma membrane	66.97	51.83
Solyc04g081590.2.1	Tomato	plasma membrane	66.58	51.32
KRH24413	Soybean	plasma membrane	63.68	49.04
KRH29397	Soybean	plasma membrane	62.76	48.62
GSMUA_Achr9P24170_001	Banana	plasma membrane	51.32	47.85
Bra020928.1-P	Field mustard	cytosol, plasma membrane, plastid	51.84	46.68
Bra038810.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.84	46.68
KXG20897	Sorghum	plasma membrane	60.26	45.8
Os06t0717200-01	Rice	plasma membrane	59.08	45.17
Zm00001d014793_P001	Maize	plasma membrane	58.95	44.98
Bra024413.1-P	Field mustard	plasma membrane, plastid	57.89	44.13
Bra012925.1-P	Field mustard	plasma membrane	57.11	43.71
HORVU0Hr1G022670.2	Barley	mitochondrion	57.76	41.03
Bra013451.1-P	Field mustard	plasma membrane	50.79	39.96
TraesCS7D01G521200.1	Wheat	plasma membrane	57.5	39.51
KRH29398	Soybean	cytosol	32.11	38.61
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	28.42	35.35
Bra012952.1-P	Field mustard	plasma membrane	41.84	31.3
Bra003858.1-P	Field mustard	cytosol	35.0	30.16
Bra026425.1-P	Field mustard	cytosol	36.32	29.93
Bra030734.1-P	Field mustard	plasma membrane	40.13	29.87
Bra011046.1-P	Field mustard	plasma membrane	39.61	29.63
Bra008505.1-P	Field mustard	plasma membrane	39.47	27.55
Bra034446.1-P	Field mustard	plasma membrane	39.08	27.12
Bra025988.1-P	Field mustard	plasma membrane	39.61	27.12
Bra021831.1-P	Field mustard	plasma membrane	40.0	27.07
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	15.26	25.95
Bra002855.1-P	Field mustard	plasma membrane	36.97	25.85
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	14.87	25.11
Bra013446.1-P	Field mustard	mitochondrion	35.53	24.95
Bra036154.1-P	Field mustard	plasma membrane	36.97	24.93
Bra014998.1-P	Field mustard	plasma membrane	36.05	24.18
Bra039525.1-P	Field mustard	plasma membrane	36.32	22.2
Bra025113.1-P	Field mustard	plasma membrane	35.39	21.69
Bra025951.1-P	Field mustard	plasma membrane	35.39	15.07

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra015812	EnsemblPlants:Bra015812.1
EnsemblPlants:Bra015812.1-P	GO:GO:0000003	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009934	GO:GO:0009987	GO:GO:0010080
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0033612
GO:GO:0036289	GO:GO:0040007	GO:GO:0043621	GO:GO:0048833	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M4DH35	PFAM:PF00560	PFAM:PF07714	PFAM:PF12799	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0002541FE9	SEG:seg	:	:	:

Description

AT1G75820 (E=0.0) CLV1, FAS3, FLO5 | CLV1 (CLAVATA 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase

Coordinates

chrA07:-:20727200..20729562

Molecular Weight (calculated)

83538.0 Da

IEP (calculated)

6.441

GRAVY (calculated)

0.013

Length

760 amino acids

Sequence
(BLAST)

001: MYVGYFNSYT GGVPPEFGEL TNLEVLDMAS CTLTGEIPTT LSNLKHLHTL FLHINNLTGN IPPELSGLIS LKSLDLSINQ LTGEIPQSFI SLGNITLINL
101: FRNNLHGPIP DFIGDMPNLQ VLQVWENNFT LELPANLGRN GNLKKLDVSD NHLTGLIPMD LCRGGKLETL VLSNNFFFGS IPEKLGQCKS LNKIRIVKNL
201: LNGTVPEGLF NLPLVTIIEL TDNFFSGELP GEMSGDVLDH IYLSNNWFTG LIPPAIGNFK NLQDLFLDRN RFSGNIPREV FELKHLTKIN TSANNLTGDI
301: PDSISRCTSL ISVDLSRNRI GGDIPKDIHD VINLGTLNLS GNQLTGSIPI GIGKMTSLTT LDLSFNDLSG RVPLGGQFLV FNDTSFAGNP YLCLPHHVSC
401: LTRPEQTSDR IHTALFSPSR IVITIVAAIT ALILISVAIR QMNKKKHERS LSWKLTAFQR LDFKAEDVLE CLQEENIIGK GGAGIVYRGS MPNNVDVAIK
501: RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK GLCYLHHDCS PLILHRDVKS
601: NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG VDIVRWVRNT EGEIPQPSDA
701: ATVVAIVDQR LTGYPLTSVI HVFKIAMMCV EDEAATRPTM REVVHMLTNP PKSVTNLIAF

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.