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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G085130.1 Barley endoplasmic reticulum, plasma membrane 75.33 75.84
KRH29398 Soybean cytosol 42.22 30.06
Os06t0717200-01 Rice plasma membrane 62.0 28.07
Zm00001d014793_P001 Maize plasma membrane 60.0 27.11
KXG20897 Sorghum plasma membrane 60.0 27.0
TraesCS7D01G521200.1 Wheat plasma membrane 57.33 23.33
GSMUA_Achr9P24170_001 Banana plasma membrane 40.0 22.09
CDX73202 Canola plasma membrane 46.0 20.97
AT1G75820.1 Thale cress plasma membrane 44.22 20.31
VIT_18s0001g14610.t01 Wine grape plasma membrane 44.0 20.2
CDX87661 Canola plasma membrane 42.44 19.79
KRH24413 Soybean plasma membrane 42.67 19.45
PGSC0003DMT400025747 Potato plasma membrane 42.44 19.45
Solyc04g081590.2.1 Tomato plasma membrane 42.44 19.37
KRH29397 Soybean plasma membrane 41.78 19.16
TraesCS7A01G533800.1 Wheat cytosol, plasma membrane, plastid 26.44 15.72
Bra015812.1-P Field mustard cytosol 25.11 14.87
TraesCSU01G061100.1 Wheat plastid 30.67 12.98
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001611
InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_4InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560PFAM:PF08263PFAM:PF12799PRINTS:PR00019PANTHER:PTHR27000PANTHER:PTHR27000:SF231
SMART:SM00369SUPFAM:SSF52058SignalP:SignalP-noTMEnsemblPlantsGene:TraesCSU01G171600EnsemblPlants:TraesCSU01G171600.1SEG:seg
Description
No Description!
Coordinates
chrUn:+:252840844..252842196
Molecular Weight (calculated)
48488.9 Da
IEP (calculated)
6.096
GRAVY (calculated)
0.228
Length
450 amino acids
Sequence
(BLAST)
001: MPPFLVVFIL LLLHTTSSSA SPECDVYALG KLKASLVTTS NATALGDWDP AAPSPAHCSF SGVTCDAGAR VVAINIMALS LHGGTLPLDL ELFDALANLT
101: IAACGLLGHF PASLHALPFL RHLNLSNNNL TGALPSGPGH RYFPSLELLD VYNNNLSGPL PSFGAEHAVT LRYLHLGGNY FSGVIPDDYG DLDKLEYINL
201: AAYCLSGLVP ASLGRLKRLR EMYMGYYNQF DGGIPAEFGD LEALVLLDMS SCCLTGPIPP ELGQLKLLNT LYMFLNWLSG DIPPALGELK NLASLDLSMN
301: ELYGKIPASL AKLTNLKLLN LFGNYLHGVI PEFVADLLNL EVLQLWDNNF SGHLPAGLGK NGRLKKLNVG NNNLSGHLPA GLRNYSLKTL DVSYNHLTGH
401: LPPDICTSGN LEKLVLMENV FFGPIPVSLG DCKMLRHVYL NNNFLSGPIP
Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)
001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
Arabidopsis Description
CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.