CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24413
KRH29397
KRH29398

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	KRH24413	AT1G75820.1	9294234
AT1G75820.1	KRH29397	AT1G75820.1	9294234
AT1G75820.1	KRH29398	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29397	Soybean	plasma membrane	90.27	90.83
KRH29398	Soybean	cytosol	52.48	81.96
VIT_18s0001g14610.t01	Wine grape	plasma membrane	64.24	64.69
Bra015812.1-P	Field mustard	cytosol	49.04	63.68
AT1G75820.1	Thale cress	plasma membrane	61.3	61.73
CDX87661	Canola	plasma membrane	59.78	61.14
CDX73202	Canola	plasma membrane	61.09	61.09
PGSC0003DMT400025747	Potato	plasma membrane	60.18	60.49
Solyc04g081590.2.1	Tomato	plasma membrane	60.18	60.24
GSMUA_Achr9P24170_001	Banana	plasma membrane	47.01	56.93
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	42.45	55.35
KXG20897	Sorghum	plasma membrane	54.31	53.6
Os06t0717200-01	Rice	plasma membrane	53.5	53.12
Zm00001d014793_P001	Maize	plasma membrane	53.5	53.01
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	31.21	50.41
HORVU0Hr1G022670.2	Barley	mitochondrion	53.8	49.63
KRH04350	Soybean	plasma membrane	49.54	48.42
KRH58184	Soybean	plasma membrane	49.14	48.12
KRH28297	Soybean	plasma membrane	49.14	47.92
KRH77190	Soybean	plasma membrane	49.04	47.83
TraesCS7D01G521200.1	Wheat	plasma membrane	51.98	46.38
KRH14558	Soybean	plasma membrane	46.0	46.04
KRH73570	Soybean	plasma membrane	46.3	45.75
KRG99047	Soybean	plasma membrane	45.49	45.49
KRH45951	Soybean	plasma membrane	45.59	45.27
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	19.76	43.62
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	19.45	42.67
KRH23822	Soybean	plasma membrane	39.21	37.87
KRH39953	Soybean	plasma membrane	39.21	37.57
KRH32252	Soybean	plasma membrane	38.2	37.14
KRH67464	Soybean	plasma membrane	38.3	36.84
KRH19626	Soybean	nucleus, plasma membrane	36.27	36.76
KRG95745	Soybean	plasma membrane	37.89	36.59
KRG92719	Soybean	mitochondrion, plasma membrane	37.69	36.05
KRH34124	Soybean	mitochondrion, plasma membrane	37.69	35.98
KRH37902	Soybean	plasma membrane	32.73	33.82
KRH12906	Soybean	plasma membrane	32.73	33.65
KRG91721	Soybean	plasma membrane	36.68	33.55
KRH35050	Soybean	plasma membrane	36.27	33.12
KRH43841	Soybean	plasma membrane	37.28	32.86
KRH13628	Soybean	plasma membrane	37.08	32.74
KRG90257	Soybean	plasma membrane	36.78	32.59
KRH33496	Soybean	plasma membrane	36.78	32.47
KRH64523	Soybean	plasma membrane	34.65	31.41
KRH53418	Soybean	plasma membrane	34.55	31.31
KRH18124	Soybean	vacuole	34.35	31.16
KRH03251	Soybean	plasma membrane	35.26	31.02
KRH15990	Soybean	extracellular, plasma membrane, vacuole	34.14	31.0
KRH75100	Soybean	plasma membrane, plastid	33.94	30.13
KRH46804	Soybean	plasma membrane	34.85	29.84
KRG92156	Soybean	plasma membrane	32.62	29.76
KRG99860	Soybean	plasma membrane	34.45	29.62
KRH70959	Soybean	plastid	34.14	29.59
KRH34632	Soybean	plasma membrane	32.42	29.55
KRH57106	Soybean	plasma membrane	32.93	29.44
KRG98433	Soybean	plasma membrane	32.22	29.17
KRH73937	Soybean	plasma membrane	31.91	29.17
KRH46430	Soybean	plasma membrane	32.02	28.94
KRH09613	Soybean	plasma membrane	31.71	28.82
KRH14195	Soybean	plasma membrane	31.71	28.64
KRH37162	Soybean	plasma membrane	34.14	26.81
KRH12156	Soybean	plasma membrane	34.04	26.73
KRH58543	Soybean	plasma membrane	33.54	26.04

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:732625	ProteinID:AAN74865.1
EMBL:ACUP02007175	EMBL:AF197947	ProteinID:BAX25285.1	EnsemblPlantsGene:GLYMA_12G040000	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH24413	ProteinID:KRH24413	ProteinID:KRH24413.1	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714
PFAM:PF08263	PFAM:PF13516	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231
InterPro:Prot_kinase_dom	UniProt:Q9M6A7	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000AC3C7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:2881839..2885669

Molecular Weight (calculated)

108915.0 Da

IEP (calculated)

8.258

GRAVY (calculated)

0.025

Length

987 amino acids

Sequence
(BLAST)

001: MRSCVCYTLL LFIFFIWLRV ATCSSFTDME SLLKLKDSMK GDKAKDDALH DWKFFPSLSA HCFFSGVKCD RELRVVAINV SFVPLFGHLP PEIGQLDKLE
101: NLTVSQNNLT GVLPKELAAL TSLKHLNISH NVFSGHFPGQ IILPMTKLEV LDVYDNNFTG PLPVELVKLE KLKYLKLDGN YFSGSIPESY SEFKSLEFLS
201: LSTNSLSGKI PKSLSKLKTL RYLKLGYNNA YEGGIPPEFG SMKSLRYLDL SSCNLSGEIP PSLANLTNLD TLFLQINNLT GTIPSELSAM VSLMSLDLSI
301: NDLTGEIPMS FSQLRNLTLM NFFQNNLRGS VPSFVGELPN LETLQLWDNN FSFVLPPNLG QNGKLKFFDV IKNHFTGLIP RDLCKSGRLQ TIMITDNFFR
401: GPIPNEIGNC KSLTKIRASN NYLNGVVPSG IFKLPSVTII ELANNRFNGE LPPEISGESL GILTLSNNLF SGKIPPALKN LRALQTLSLD ANEFVGEIPG
501: EVFDLPMLTV VNISGNNLTG PIPTTLTRCV SLTAVDLSRN MLEGKIPKGI KNLTDLSIFN VSINQISGPV PEEIRFMLSL TTLDLSNNNF IGKVPTGGQF
601: AVFSEKSFAG NPNLCTSHSC PNSSLYPDDA LKKRRGPWSL KSTRVIVIVI ALGTAALLVA VTVYMMRRRK MNLAKTWKLT AFQRLNFKAE DVVECLKEEN
701: IIGKGGAGIV YRGSMPNGTD VAIKRLVGAG SGRNDYGFKA EIETLGKIRH RNIMRLLGYV SNKETNLLLY EYMPNGSLGE WLHGAKGGHL KWEMRYKIAV
801: EAAKGLCYLH HDCSPLIIHR DVKSNNILLD GDLEAHVADF GLAKFLYDPG ASQSMSSIAG SYGYIAPEYA YTLKVDEKSD VYSFGVVLLE LIIGRKPVGE
901: FGDGVDIVGW VNKTRLELAQ PSDAALVLAV VDPRLSGYPL TSVIYMFNIA MMCVKEMGPA RPTMREVVHM LSEPPHSATH THNLINL

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.