Factsheet for Zm00001d014793_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014793_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	Zm00001d014793_P001	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20897	Sorghum	plasma membrane	91.47	91.1
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	59.64	78.47
Os06t0717200-01	Rice	plasma membrane	77.91	78.07
HORVU0Hr1G022670.2	Barley	mitochondrion	77.31	71.96
TraesCS7D01G521200.1	Wheat	plasma membrane	75.9	68.35
GSMUA_Achr9P24170_001	Banana	plasma membrane	52.81	64.54
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	27.11	60.0
Bra015812.1-P	Field mustard	cytosol	44.98	58.95
VIT_18s0001g14610.t01	Wine grape	plasma membrane	55.32	56.22
AT1G75820.1	Thale cress	plasma membrane	54.72	55.61
CDX73202	Canola	plasma membrane	55.02	55.52
CDX87661	Canola	plasma membrane	53.21	54.92
Solyc04g081590.2.1	Tomato	plasma membrane	53.11	53.65
PGSC0003DMT400025747	Potato	plasma membrane	52.81	53.56
KRH24413	Soybean	plasma membrane	53.01	53.5
KRH29397	Soybean	plasma membrane	51.71	52.5
Zm00001d034240_P004	Maize	plasma membrane	53.71	51.69
Zm00001d018752_P001	Maize	mitochondrion, plasma membrane	53.51	51.4
Zm00001d013162_P001	Maize	plasma membrane	53.01	51.36
KRH29398	Soybean	cytosol	31.43	49.53
Zm00001d028317_P001	Maize	plasma membrane	50.5	48.69
Zm00001d039218_P002	Maize	plasma membrane	47.89	47.75
Zm00001d048968_P001	Maize	plasma membrane	49.8	47.65
Zm00001d007254_P001	Maize	plasma membrane	49.1	47.25
Zm00001d049588_P001	Maize	plasma membrane	39.06	38.06
Zm00001d048390_P001	Maize	plasma membrane	39.36	37.44
Zm00001d014971_P001	Maize	plasma membrane	38.76	37.37
Zm00001d027645_P001	Maize	plasma membrane	38.55	36.92
Zm00001d018807_P001	Maize	plasma membrane	38.45	34.66
Zm00001d046485_P001	Maize	plasma membrane	36.95	34.11
Zm00001d003101_P007	Maize	plasma membrane	37.25	33.82
Zm00001d008715_P001	Maize	plasma membrane	37.45	33.42
Zm00001d037672_P001	Maize	plasma membrane	36.35	32.5
Zm00001d052835_P001	Maize	plasma membrane	36.04	32.46
Zm00001d025002_P001	Maize	plasma membrane	37.65	32.36
Zm00001d031427_P001	Maize	plasma membrane	34.94	31.99
Zm00001d005986_P001	Maize	plasma membrane	35.04	31.81
Zm00001d020862_P001	Maize	plastid	35.44	31.02
Zm00001d030323_P001	Maize	plasma membrane	32.53	29.32
Zm00001d021535_P001	Maize	mitochondrion, plasma membrane	36.35	28.73
Zm00001d032116_P003	Maize	mitochondrion, plasma membrane	31.93	27.09
Zm00001d050074_P002	Maize	plasma membrane	31.53	26.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103626458	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1Q0ZRS5
ProteinID:AQK67204.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009506
GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009934	GO:GO:0009987	GO:GO:0010080
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0030154	GO:GO:0033612	GO:GO:0040007	GO:GO:0043621	GO:GO:0048833	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:P0DL10	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000220F60A	EnsemblPlantsGene:Zm00001d014793	EnsemblPlants:Zm00001d014793_P001	EnsemblPlants:Zm00001d014793_T001	SEG:seg

Description

thick tassel dwarf1 thick tassel dwarf1

Coordinates

chr5:+:63456839..63460120

Molecular Weight (calculated)

105994.0 Da

IEP (calculated)

7.142

GRAVY (calculated)

0.112

Length

996 amino acids

Sequence
(BLAST)

001: MPPPTFLLGL LLLLLLAAAA PAPASATPER DAYALSRLKA SLVPSATNST SAPLSDWDPA ATPPAHCAFT GVTCDAATSR VVAINLTAVP LHGGALPPEV
101: ALLDALASLT VANCYLRGRL PPALASMPAL RHLNLSNNNL SGPFPPPPPA AYFPALEIVD VYNNNLSGPL PPLGAPHARS LRYLHLGGNY FNGSIPDTFG
201: DLAALEYLGL NGNALSGRVP PSLSRLSRLR EMYVGYYNQY SGGVPREFGA LQSLVRLDMS SCTLTGPIPP ELARLSRLDT LFLALNQLTG EIPPELGALT
301: SLRSLDLSIN DLAGEIPASF AALTNLKLLN LFRNHLRGEI PAFLGDFPFL EVLQVWDNNL TGPLPPALGR NGRLKTLDVT SNHLTGTIPP DLCAGRNLQL
401: LVLMDNGFFG SIPESLGDCK TLTRVRLGKN FLTGPVPAGL FDLPQANMLE LTDNMLTGEL PDVIAGDKIG MLMLGNNRIG GRIPAAIGNL PALQTLSLES
501: NNFSGPLPPE IGRLRNLTRL NASGNALTGG IPRELMGCAS LGAVDLSRNG LTGEIPDTVT SLKILCTLNV SRNRLSGELP AAMANMTSLT TLDVSYNQLS
601: GPVPMQGQFL VFNESSFVGN PGLCSACPPS SGGARSPFSL RRWDSKKLLV WLVVLLTLLV LAVLGARKAH EAWREAARRR SGAWKMTAFQ KLDFSADDVV
701: ECLKEDNIIG KGGAGIVYHG VTRGGAELAI KRLVGRGCGD HDRGFTAEVT TLGRIRHRNI VRLLGFVSNR EANLLLYEYM PNGSLGEMLH GGKGGHLGWE
801: ARARVAAEAA RGLCYLHHDC APRIIHRDVK SNNILLDSAF EAHVADFGLA KFLGGGGATS ECMSAIAGSY GYIAPEYAYT LRVDEKSDVY SFGVVLLELI
901: TGRRPVGSFG DGVDIVHWVR KVTADAAAAE EPVLLVADRR LAPEPVPLLA DLYRVAMACV EEASTARPTM REVVHMLSTS AAAQPDVPHA LCKVVD

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.