CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73202
CDX87661

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	CDX73202	AT1G75820.1	9294234
AT1G75820.1	CDX87661	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015812.1-P	Field mustard	cytosol	76.17	96.71
CDX73202	Canola	plasma membrane	97.51	95.34
AT1G75820.1	Thale cress	plasma membrane	87.56	86.22
VIT_18s0001g14610.t01	Wine grape	plasma membrane	67.36	66.33
PGSC0003DMT400025747	Potato	plasma membrane	62.49	61.41
Solyc04g081590.2.1	Tomato	plasma membrane	61.97	60.65
KRH24413	Soybean	plasma membrane	61.14	59.78
KRH29397	Soybean	plasma membrane	60.0	59.02
GSMUA_Achr9P24170_001	Banana	plasma membrane	47.56	56.32
Os06t0717200-01	Rice	plasma membrane	55.96	54.33
KXG20897	Sorghum	plasma membrane	55.96	54.0
KRH29398	Soybean	cytosol	35.34	53.96
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	41.87	53.37
Zm00001d014793_P001	Maize	plasma membrane	54.92	53.21
CDY08759	Canola	plasma membrane	52.64	52.32
CDY02112	Canola	plasma membrane	52.44	52.22
CDY45620	Canola	plasma membrane	52.64	52.21
CDY23037	Canola	plasma membrane	51.92	51.81
CDY54567	Canola	cytosol, plasma membrane, plastid	43.42	49.64
CDY31445	Canola	cytosol, plasma membrane, plastid	43.32	49.53
CDX98665	Canola	cytosol, nucleus, plasma membrane	43.01	49.17
CDX93999	Canola	cytosol, nucleus, plasma membrane	43.01	49.17
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	31.09	49.1
HORVU0Hr1G022670.2	Barley	mitochondrion	54.09	48.78
CDY62258	Canola	plasma membrane	41.55	46.04
CDY66353	Canola	plasma membrane	40.93	45.98
TraesCS7D01G521200.1	Wheat	plasma membrane	52.12	45.48
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	21.04	45.41
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	19.79	42.44
CDX89518	Canola	cytosol	0.52	41.67
CDY02141	Canola	plasma membrane	34.82	37.71
CDY23065	Canola	plasma membrane	39.07	37.11
CDX97498	Canola	plasma membrane	37.93	35.85
CDY31136	Canola	plasma membrane	37.82	35.78
CDY35204	Canola	plasma membrane	37.1	35.62
CDY38373	Canola	plasma membrane	34.61	34.72
CDY37749	Canola	plasma membrane	33.26	34.48
CDY23764	Canola	plasma membrane	37.72	34.18
CDY28391	Canola	plasma membrane	37.41	33.71
CDY26259	Canola	plastid	36.79	32.9
CDX73290	Canola	plasma membrane	36.99	32.51
CDY48481	Canola	plasma membrane	37.1	32.31
CDX94319	Canola	cytosol	30.36	31.78
CDX89328	Canola	cytosol	30.36	31.78
CDY28619	Canola	plasma membrane	35.03	31.71
CDY17379	Canola	plasma membrane	35.23	31.28
CDY68314	Canola	plasma membrane	29.33	31.13
CDY37560	Canola	plasma membrane	31.09	30.83
CDX72170	Canola	plasma membrane	28.39	30.79
CDY19929	Canola	cytosol	26.63	30.78
CDY56672	Canola	cytosol	26.42	30.58
CDY27242	Canola	plasma membrane	27.98	30.13
CDY59496	Canola	plasma membrane	30.88	29.22
CDY11130	Canola	plasma membrane	31.19	29.11
CDY65166	Canola	plasma membrane	30.88	29.02
CDX77472	Canola	plasma membrane	33.78	28.77
CDX85146	Canola	plasma membrane	32.85	28.71
CDX68246	Canola	plasma membrane	32.75	28.65
CDX73169	Canola	plasma membrane	25.8	27.82
CDY14942	Canola	plasma membrane	34.51	26.79
CDX96976	Canola	plasma membrane	34.3	26.63
CDY06535	Canola	plasma membrane	32.23	19.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078DEI6	EnsemblPlants:CDX87661
ProteinID:CDX87661	ProteinID:CDX87661.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00146668001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF12799
PFAM:PF13855	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EE55AC	SEG:seg	:	:

Description

BnaA07g32120D

Coordinates

chrLK031850:+:1694538..1697789

Molecular Weight (calculated)

105534.0 Da

IEP (calculated)

6.300

GRAVY (calculated)

0.066

Length

965 amino acids

Sequence
(BLAST)

001: MEMRLLKTHL LFLHLHYVIS ISLLCFAPCL ASTDMDHLLT LKSSMVGPNG NGLHDWVHSP SPTAHCSFSG VSCDGDARVI SLNVSFTPLF GTISPEIGML
101: NRLVNLTLAA NNFSGMLPLE MKSLTSLKVL NISNNVNLNG TFPGEILTPM VDLEVLDAYN NNFTGPLPPE IPGLKKLRHL SLGGNFLTGE IPESYGDIQS
201: LEYLGLNGAG LSGESPAFLS RLKNLKEMYV GYFNSYTGGV PPEFGELSNL EVLDMASCTL TGEIPTTLSN LKHLHTLFLH INNLTGNIPP ELSGLISLKS
301: LDLSINQLTG EIPQSFISLG NITLINLFRN NLHGPIPDFI GDMPNLQVLQ LDVSDNHLTG LIPMDLCRGG KLETLVLSNN FFFGSIPEKL GQCKSLNKIR
401: IVKNLLNGTV PEGLFNLPLV TIIELTDNFF SGELPGEMSG DVLDHIYLSN NWFSGLIPPA IGNFKNLQDL FLDRNRFSGN IPREVFELKH LTKINTSANN
501: LTGDIPDSIS RCTSLISVDL SRNRIGGDIP KDIHDVMNLG TLNLSGNQLT GSIPIGIGKM TSLTTLDLSF NDLSGRVPLG GQFLVFNDTS FAGNPYLCLP
601: HHVSCLTRPE QTSDRIHTAL FSPSRIVITI VAAITALILI SVAIRQMNKK KHERSLSWKL TAFQRLDFKA EDVLECLQEE NIIGKGGAGI VYRGSMPNNV
701: DVAIKRLVGR GTGRSDHGFT AEIQTLGRIR HRHIVRLLGY VANKDTNLLL YEYMPNGSLG ELLHGSKGGH LQWETRHRVA VEAAKGLCYL HHDCSPLILH
801: RDVKSNNILL DSDFEAHVAD FGLAKFLVDG AASECMSSIA GSYGYIAPEY AYTLKVDEKS DVYSFGVVLL ELIAGKKPVG EFGEGVDIVR WVRNTEGEIP
901: QPSDAATVVA IVDQRLTGYP LTSVIHVFKI AMMCVEDEAA TRPTMREVVH MLTNPPKSVT NLIAF

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.