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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35204 Canola plasma membrane 96.99 92.84
AT4G28650.1 Thale cress plasma membrane 89.81 85.29
KRH32252 Soybean plasma membrane 66.94 63.45
KRG95745 Soybean plasma membrane 67.26 63.31
KRH19626 Soybean nucleus, plasma membrane 63.72 62.94
Solyc09g064520.2.1 Tomato plasma membrane 66.63 62.84
PGSC0003DMT400022119 Potato plasma membrane 67.05 62.74
KRH67464 Soybean plasma membrane 66.84 62.67
GSMUA_Achr1P06510_001 Banana cytosol 44.39 61.62
GSMUA_Achr2P04260_001 Banana plasma membrane 46.15 56.42
GSMUA_Achr11P... Banana plasma membrane 44.49 55.15
CDY31136 Canola plasma membrane 57.8 54.51
CDX97498 Canola plasma membrane 57.8 54.46
EES06133 Sorghum plasma membrane 57.17 52.78
Zm00001d014971_P001 Maize plasma membrane 56.44 52.57
Os02t0111800-02 Rice plasma membrane 56.13 51.92
TraesCS6A01G029100.1 Wheat plasma membrane 55.41 51.85
HORVU6Hr1G005460.1 Barley plasma membrane 55.61 51.79
TraesCS6B01G042000.1 Wheat plasma membrane 55.3 51.65
TraesCS6D01G033300.1 Wheat plasma membrane 55.09 51.51
EER92863 Sorghum plasma membrane 55.41 51.3
TraesCS4A01G409400.1 Wheat plasma membrane 54.68 50.87
TraesCS4B01G309300.1 Wheat plasma membrane 54.57 50.77
HORVU4Hr1G079040.1 Barley plasma membrane 54.57 50.77
Zm00001d027645_P001 Maize plasma membrane 54.89 50.77
TraesCS4D01G307500.1 Wheat plasma membrane 54.47 50.68
Zm00001d048390_P001 Maize plasma membrane 55.09 50.62
CDY02141 Canola plasma membrane 39.29 42.42
TraesCS5D01G517500.1 Wheat plasma membrane, vacuole 32.43 42.39
VIT_07s0005g04390.t01 Wine grape plasma membrane 62.27 42.24
Os03t0145102-00 Rice plasma membrane 43.35 42.12
CDY23065 Canola plasma membrane 43.76 41.44
TraesCS5B01G517600.1 Wheat plasma membrane 33.37 41.37
CDX98665 Canola cytosol, nucleus, plasma membrane 33.26 37.91
CDY54567 Canola cytosol, plasma membrane, plastid 33.26 37.91
CDX93999 Canola cytosol, nucleus, plasma membrane 33.16 37.8
CDY31445 Canola cytosol, plasma membrane, plastid 32.95 37.56
CDY23037 Canola plasma membrane 37.73 37.54
CDY62258 Canola plasma membrane 33.78 37.31
CDY02112 Canola plasma membrane 37.53 37.25
CDY45620 Canola plasma membrane 37.63 37.2
CDY08759 Canola plasma membrane 36.8 36.46
CDY66353 Canola plasma membrane 31.29 35.04
CDX73202 Canola plasma membrane 35.86 34.95
CDX87661 Canola plasma membrane 34.72 34.61
CDY37749 Canola plasma membrane 33.37 34.48
CDX89518 Canola cytosol 0.42 33.33
CDX72170 Canola plasma membrane 30.15 32.58
CDY23764 Canola plasma membrane 36.07 32.58
CDY19929 Canola cytosol 28.27 32.57
CDY27242 Canola plasma membrane 30.15 32.37
CDY56672 Canola cytosol 27.86 32.13
CDY28391 Canola plasma membrane 35.65 32.03
CDX89328 Canola cytosol 30.35 31.67
CDX94319 Canola cytosol 30.25 31.56
CDX85146 Canola plasma membrane 36.07 31.43
CDX77472 Canola plasma membrane 36.69 31.16
CDY65166 Canola plasma membrane 33.06 30.96
CDY37560 Canola plasma membrane 31.29 30.94
CDY68314 Canola plasma membrane 29.11 30.8
CDX73169 Canola plasma membrane 28.59 30.73
CDX73290 Canola plasma membrane 34.93 30.6
CDY26259 Canola plastid 34.2 30.49
CDY59496 Canola plasma membrane 32.22 30.39
CDY28619 Canola plasma membrane 33.58 30.3
CDY48481 Canola plasma membrane 34.82 30.23
CDY11130 Canola plasma membrane 32.33 30.08
CDX68246 Canola plasma membrane 34.3 29.92
CDY17379 Canola plasma membrane 33.78 29.9
CDX96976 Canola plasma membrane 33.99 26.31
CDY14942 Canola plasma membrane 33.78 26.15
CDY06535 Canola plasma membrane 31.18 19.05
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078HNH8UniProt:A0A078HNH8
EnsemblPlants:CDY38373ProteinID:CDY38373ProteinID:CDY38373.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00065788001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263PFAM:PF13516
PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27000
PANTHER:PTHR27000:SF217InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369SUPFAM:SSF52047
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE7284
SEG:seg:::::
Description
BnaC01g09820DBnaC01g09820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNH8]
Coordinates
chrLK032423:+:34321..37653
Molecular Weight (calculated)
105164.0 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.067
Length
962 amino acids
Sequence
(BLAST)
001: MKMKVIVLFL YYCYYIGSTS SVSASIDNGN ELSVLLSVKS TLTDPLNSLK DWKLSGTDDH CSWTGVQCNS HGNVEKLDLS GMNLTGKISD SIKQLTSLVS
101: FNISCNGFES LLPTSLPPLK SVDISQNEFT GNLFVFGNES AGLVHLNVSG NNLSGNLTED LGNLVSLEVL DLRGNFFQGS LPRSFKNLQK LRYLGLSGNN
201: LTGELPRVLG ELSSLETAIL GYNEFEGPIP PEFGNINSLK YLDLATGKLS GQIPSELGKL KSLETLYLYQ NHFTGKIPPE IGNITTLTYL DLSQNALSGE
301: IPVQITELKN LQLLNLMGNK LSGSVPPEIS NLAELHTLEL WNNTLSGELP SDLGKNSPLE WLDVSTNSFS GEIPSTLCSK GNLTKLILMQ NNLLNGSIPI
401: GFGKLEKLQR LDSSLPSTIL SIHNLQAFLI AENDLSGEVP DQFQDCPSLS NLDLSSNTLS GTIPSSIASC EKLVTINLRN NQLTGEIPRQ VTTMSALAVL
501: DLSNNSLTGK LPESIGTSPA LELLNVSYNK LTGPVPTNGF LRAINPDDLR GNAGLCGGVL PPCSDSQNAA SRHKSLHGKR IVVGWLIGIA SALLLGILVI
601: VTRTLYKRWY SNGFFSDETV SKGEWPWRLM AFHRLGFTAS DILACVRESN MIGMGATGIV YKAEMSRSTT VLAVKKLWRS AADIEDGTTG DFVGEVNLLG
701: KLRHRNIVRL LGFLYNDKNM MIVYEFMLNG NLGDAIHGKN AAGRLLVDWV SRYNIALGVA HGLAYLHHDC HPPVIHRDIK SNNILLDANL DARIADFGLA
801: RMMARKKETV SMVAGSYGYI APEYGYTLQV DEKIDIYSYG VVLLELLTGR RPLDPEFGES VDIVEWVRKK IRDNISLEEA LDPNVGNCRY VQEEMLLVLQ
901: IALLCTTKLP KDRPSMRDVI SMLGEAKPRR KSNSNEENTS RCGLAEKQQP SVFSASPVND LL
Best Arabidopsis Sequence Match ( AT4G28650.1 )
(BLAST)
0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL
Arabidopsis Description
MIK1MDIS1-interacting receptor like kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0G7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.