CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66353	Canola	plasma membrane	82.78	83.93
CDX98665	Canola	cytosol, nucleus, plasma membrane	75.09	77.49
CDY54567	Canola	cytosol, plasma membrane, plastid	74.63	77.01
CDY31445	Canola	cytosol, plasma membrane, plastid	74.4	76.78
CDX93999	Canola	cytosol, nucleus, plasma membrane	74.28	76.66
AT4G20270.1	Thale cress	plasma membrane	84.84	74.5
VIT_01s0010g00330.t01	Wine grape	plasma membrane	63.72	56.17
GSMUA_Achr8P27460_001	Banana	plasma membrane	48.79	55.56
Solyc01g080770.2.1	Tomato	plasma membrane	61.08	55.42
KRG99047	Soybean	plasma membrane	62.46	55.12
PGSC0003DMT400016060	Potato	plasma membrane	60.62	55.0
KRH14558	Soybean	plasma membrane	62.23	54.97
GSMUA_Achr6P22870_001	Banana	plasma membrane	44.66	54.79
KRH45951	Soybean	plasma membrane	62.46	54.73
KRH73570	Soybean	plasma membrane	62.23	54.25
GSMUA_Achr9P00190_001	Banana	plasma membrane	46.04	51.94
CDY45620	Canola	plasma membrane	53.73	48.1
CDY23037	Canola	plasma membrane	53.27	47.98
CDY02112	Canola	plasma membrane	52.93	47.57
CDY08759	Canola	plasma membrane	52.58	47.17
Zm00001d039218_P002	Maize	plasma membrane	52.12	45.45
EES20075	Sorghum	plasma membrane	53.04	44.0
TraesCS1D01G452700.1	Wheat	plasma membrane	51.09	41.74
TraesCS1B01G479300.1	Wheat	plasma membrane	50.63	41.68
CDX89518	Canola	cytosol	0.57	41.67
CDX73202	Canola	plasma membrane	47.19	41.64
CDX87661	Canola	plasma membrane	46.04	41.55
TraesCS1A01G444500.1	Wheat	plasma membrane	50.52	41.28
Os05t0595800-00	Rice	plasma membrane	41.45	40.84
HORVU1Hr1G095340.2	Barley	plasma membrane	44.89	36.71
CDY02141	Canola	plasma membrane	35.48	34.68
CDY38373	Canola	plasma membrane	37.31	33.78
CDY35204	Canola	plasma membrane	38.0	32.94
CDY23065	Canola	plasma membrane	38.12	32.68
CDY31136	Canola	plasma membrane	36.97	31.57
CDX97498	Canola	plasma membrane	36.97	31.54
CDY37749	Canola	plasma membrane	33.18	31.04
CDY28391	Canola	plasma membrane	37.77	30.72
CDY23764	Canola	plasma membrane	37.54	30.7
CDY19929	Canola	cytosol	28.59	29.82
CDY56672	Canola	cytosol	28.36	29.62
CDX73290	Canola	plasma membrane	37.31	29.6
CDX73169	Canola	plasma membrane	30.31	29.5
CDY26259	Canola	plastid	35.36	28.54
CDX85146	Canola	plasma membrane	36.17	28.53
CDX89328	Canola	cytosol	30.2	28.52
CDY59496	Canola	plasma membrane	33.18	28.33
CDY48481	Canola	plasma membrane	35.94	28.25
CDX94319	Canola	cytosol	29.85	28.2
CDX77472	Canola	plasma membrane	36.39	27.98
CDY28619	Canola	plasma membrane	33.98	27.77
CDY17379	Canola	plasma membrane	34.33	27.51
CDY65166	Canola	plasma membrane	31.8	26.97
CDY68314	Canola	plasma membrane	27.78	26.62
CDY11130	Canola	plasma membrane	31.23	26.31
CDX72170	Canola	plasma membrane	26.64	26.07
CDX68246	Canola	plasma membrane	32.84	25.93
CDY37560	Canola	plasma membrane	28.93	25.9
CDY27242	Canola	plasma membrane	26.41	25.67
CDY14942	Canola	plasma membrane	33.87	23.73
CDX96976	Canola	plasma membrane	33.3	23.33
CDY06535	Canola	plasma membrane	31.69	17.52

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078JD39	UniProt:A0A078JD39
EnsemblPlants:CDY62258	ProteinID:CDY62258	ProteinID:CDY62258.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00036117001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF121	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EDF363	SEG:seg	:	:	:	:

Description

BnaCnng39750DBnaCnng39750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD39]

Coordinates

chrLK034121:+:34035..37404

Molecular Weight (calculated)

96587.5 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.105

Length

871 amino acids

Sequence
(BLAST)

001: MADKIFTFFL LLSSFSPLLC SSSSSSLNLS LIRQANVLVS LKKSFDSYDP SLDSWNLPNF KSLCSWTGVS CDNLNQSITR LDISNHNIFG TLSPEIRKLS
101: SLEVLNISNN AFEGELKPLE FGQMSQLATL DAYNNNFNGS LPLSLTKLTK LGYLNLGGNY FNGEIPRSYG DFLRLKHLDL SGNDLSGRIP DELGNITTLE
201: KLYLGYDNDF HGIPKGLGSL INLVLLDLAN CSLRGSVPSE LGHLKNLEVL FLQINELTGS IPRELGNMTN LKTLDLSYNS LQGEIPLELS GLQKLQVFNL
301: FFNRLHGEIH EFVSHFPDLE ILKLWHNNFT GKIPKKLGSN ERSSNLSQIN LSNNRLSGPI PGSVKNLRSL QILLLGSNRF TGQIPGEIGR LKGLLKIDMS
401: MNSLSGKVPP EFGECQSLTY LDLSHNQLSG QIPVQISQIR MLTYLNVSWN SLNQSLPVEL GYLKSLTSAD FSHNNFSGPV QPTLGQFSYF NNTSFLGNPF
501: LCGYSSNPCN GSQNQSQSQL LNQKNANSHG ENSSKFKMLL GLGLLGFFLM FIVLALVNNW RMRRNSPNLW KLIGFQKLGF GSEHVLECVK ENNVIGKGGA
601: GIVYKGLMPN GEEVAVKKLL TVSKGSSHDN GLSAEIQTLG RIRHRNIVRL IAFCSNKDVN LLVYEYMPNG SLGEALHGKA GVFLKWETRL QIALEAAKGL
701: CYLHHDCSPL IIHRDVKSNN ILLGPEFEAH VADFGLAKFM MQDNGASQCM SSVVGSYGYI APEYGYTLRI DEKSDVYSFG VVLLELITGR RPLDKFGEEG
801: IDIVQWSMIQ TNCNRQGVVK IIDQRLSNVP LGEAMELFFV AMSCVQEHSV ERPTMREVVQ MISQAKHPNT I

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.