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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026425.1-P Field mustard cytosol 99.24 99.24
CDX94319 Canola cytosol 96.96 96.96
AT4G26540.1 Thale cress plasma membrane 87.74 74.15
CDY17379 Canola plasma membrane 80.59 68.35
CDY28619 Canola plasma membrane 78.42 67.82
VIT_19s0015g01120.t01 Wine grape plasma membrane 64.43 58.12
KRG98433 Soybean plasma membrane 68.55 57.98
KRH46430 Soybean plasma membrane 68.44 57.78
Solyc07g065860.2.1 Tomato plasma membrane 67.46 57.49
PGSC0003DMT400057334 Potato plasma membrane 67.46 57.43
KRH73937 Soybean plasma membrane 65.51 55.93
KRH14195 Soybean plasma membrane 66.16 55.81
GSMUA_Achr9P19720_001 Banana plasma membrane 48.59 51.08
TraesCS7D01G234800.2 Wheat plasma membrane 60.2 50.59
TraesCS7B01G133000.1 Wheat plasma membrane 60.2 50.55
Os08t0493800-01 Rice plasma membrane 51.74 50.53
EES15451 Sorghum plasma membrane 60.2 50.5
GSMUA_Achr3P10820_001 Banana plasma membrane 46.53 50.29
TraesCS7A01G234800.1 Wheat plasma membrane 59.98 50.23
Zm00001d052835_P001 Maize plasma membrane 60.2 50.18
TraesCS5A01G254600.1 Wheat plasma membrane 59.44 50.05
Zm00001d005986_P001 Maize plasma membrane 59.54 50.05
TraesCS5D01G262400.1 Wheat plasma membrane 59.11 49.77
TraesCS5B01G253700.1 Wheat plasma membrane 59.0 49.68
KXG35861 Sorghum plastid 60.63 49.25
HORVU7Hr1G048140.2 Barley plasma membrane, plastid 59.98 48.85
Zm00001d020862_P001 Maize plastid 60.09 48.68
HORVU5Hr1G071340.2 Barley plastid 58.79 47.63
CDY56672 Canola cytosol 42.41 46.88
CDY19929 Canola cytosol 42.3 46.71
CDX89518 Canola cytosol 0.54 41.67
CDY06535 Canola plasma membrane 70.28 41.14
CDX77472 Canola plasma membrane 49.35 40.16
CDX85146 Canola plasma membrane 47.29 39.49
CDY28391 Canola plasma membrane 44.14 38.0
CDX73290 Canola plasma membrane 44.36 37.25
CDX93999 Canola cytosol, nucleus, plasma membrane 33.51 36.61
CDY54567 Canola cytosol, plasma membrane, plastid 33.41 36.49
CDY31445 Canola cytosol, plasma membrane, plastid 33.08 36.14
CDX98665 Canola cytosol, nucleus, plasma membrane 33.08 36.14
CDY23764 Canola plasma membrane 37.53 32.49
CDY02112 Canola plasma membrane 33.95 32.3
CDY23037 Canola plasma membrane 33.73 32.16
CDY08759 Canola plasma membrane 33.41 31.72
CDY45620 Canola plasma membrane 33.3 31.55
CDY35204 Canola plasma membrane 34.38 31.54
CDY37749 Canola plasma membrane 31.13 30.83
CDY66353 Canola plasma membrane 28.52 30.62
CDX73202 Canola plasma membrane 32.65 30.5
CDY26259 Canola plastid 35.68 30.49
CDX87661 Canola plasma membrane 31.78 30.36
CDX97498 Canola plasma membrane 33.62 30.36
CDY38373 Canola plasma membrane 31.67 30.35
CDY31136 Canola plasma membrane 33.51 30.29
CDY62258 Canola plasma membrane 28.52 30.2
CDY37560 Canola plasma membrane 31.78 30.11
CDY68314 Canola plasma membrane 29.5 29.92
CDY48481 Canola plasma membrane 35.9 29.87
CDY23065 Canola plasma membrane 32.21 29.23
CDY59496 Canola plasma membrane 32.21 29.12
CDY02141 Canola plasma membrane 27.98 28.96
CDY65166 Canola plasma membrane 31.56 28.34
CDX73169 Canola plasma membrane 26.36 27.15
CDX68246 Canola plasma membrane 32.43 27.11
CDY11130 Canola plasma membrane 30.26 26.98
CDX72170 Canola plasma membrane 24.62 25.51
CDY27242 Canola plasma membrane 24.4 25.11
CDY14942 Canola plasma membrane 32.86 24.38
CDX96976 Canola plasma membrane 32.65 24.22
Os09t0479200-01 Rice extracellular 5.97 20.15
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.8.2MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DQ32
EnsemblPlants:CDX89328ProteinID:CDX89328ProteinID:CDX89328.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00149550001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF186InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF4920SEG:seg
Description
BnaA01g15650D
Coordinates
chrLK031858:+:927655..930700
Molecular Weight (calculated)
100148.0 Da
IEP (calculated)
5.962
GRAVY (calculated)
-0.027
Length
922 amino acids
Sequence
(BLAST)
001: MLFDNKLSGE IPRSIGELKS LESFRAGGNK NIRGEVPWEI GNCEHLKMLG LAETSLSGRL PASIGNLKRV QTIAIYTSLL SGPIPDEIGD CTELQNLYLY
101: QNSISGSIPT TVGSLKKLQS LLLWENNLVG KIPTELGNCP DLWLIDLSEN HLTGNIPRSF GRLTNLQELQ LSVNQISGTI PEELANCTKL THLEIDNNLI
201: TGEIPALMGN LKSLTMFFAW QNKLTGNIPG SLSECGELQA IDLSYNTLSG SIPKEIFELR NLTKLLLLSN DLSGVIPPEI GNCTNLYRLR LNGNRLAGSI
301: PAEMGNLKNL NFIDLSENRL VGVIPPAISG CESLEFLDLH SNSLSGSFLG TLPKSLKFID FSDNSLTGPL PPGIGLLTEL TKLNLAKNQL SGAIPREIST
401: CLSLQLLNLG DNAFTGKIPD ELSQIPSLAI SLNLSCNAFV GEIPARFSDL KNLGVLDVSH NRLTGKLTVL SDMQNLVSLN VSFNDFSGEL PDTPFFKKLP
501: LSDLASNKGL YISDGISTRP DGLTYSTRRS SAVKLGISVL IAVTAVLVLL AVYTLVRARA AGKQLLDEEI DSWDVTLYQK LDFSIDDIVK NLTSANVIGT
601: GSSGVVYRIT IPSGETLAVK KMWAREQSDA FNSEINTLGS IRHRNIVRLL GWCSNRNLKL LFYDYLPNGS LSSRLHGAGK GGGVSWEARY DVVLGVAHAL
701: AYLHHDCLPA IIHGDVKAMN VLLGPQFEPY LADFGLARTV SGKPDTGIDL SKPSSRPPLA GSYGYMAPEH GSMQRITEKS DVYSYGVVLL EVLTGKHPLD
801: PDLPGGAHLV KWVRDHLAEK KDPSKLLDPR LDGRTDTIMH EMLQTLAVAF LCVSNKASER PMMKDVVAML TEIRDIDVGR SEIDKIKDGS CGSKEPQVIS
901: HEKIIIAHGS SNCSFAFSDD SV
Best Arabidopsis Sequence Match ( AT4G26540.1 )
(BLAST)
0001: MPPNIYRLSF FSSLLCFFFI PCFSLDQQGQ ALLSWKSQLN ISGDAFSSWH VADTSPCNWV GVKCNRRGEV SEIQLKGMDL QGSLPVTSLR SLKSLTSLTL
0101: SSLNLTGVIP KEIGDFTELE LLDLSDNSLS GDIPVEIFRL KKLKTLSLNT NNLEGHIPME IGNLSGLVEL MLFDNKLSGE IPRSIGELKN LQVLRAGGNK
0201: NLRGELPWEI GNCENLVMLG LAETSLSGKL PASIGNLKRV QTIAIYTSLL SGPIPDEIGY CTELQNLYLY QNSISGSIPT TIGGLKKLQS LLLWQNNLVG
0301: KIPTELGNCP ELWLIDFSEN LLTGTIPRSF GKLENLQELQ LSVNQISGTI PEELTNCTKL THLEIDNNLI TGEIPSLMSN LRSLTMFFAW QNKLTGNIPQ
0401: SLSQCRELQA IDLSYNSLSG SIPKEIFGLR NLTKLLLLSN DLSGFIPPDI GNCTNLYRLR LNGNRLAGSI PSEIGNLKNL NFVDISENRL VGSIPPAISG
0501: CESLEFLDLH TNSLSGSLLG TTLPKSLKFI DFSDNALSST LPPGIGLLTE LTKLNLAKNR LSGEIPREIS TCRSLQLLNL GENDFSGEIP DELGQIPSLA
0601: ISLNLSCNRF VGEIPSRFSD LKNLGVLDVS HNQLTGNLNV LTDLQNLVSL NISYNDFSGD LPNTPFFRRL PLSDLASNRG LYISNAISTR PDPTTRNSSV
0701: VRLTILILVV VTAVLVLMAV YTLVRARAAG KQLLGEEIDS WEVTLYQKLD FSIDDIVKNL TSANVIGTGS SGVVYRITIP SGESLAVKKM WSKEESGAFN
0801: SEIKTLGSIR HRNIVRLLGW CSNRNLKLLF YDYLPNGSLS SRLHGAGKGG CVDWEARYDV VLGVAHALAY LHHDCLPTII HGDVKAMNVL LGPHFEPYLA
0901: DFGLARTISG YPNTGIDLAK PTNRPPMAGS YGYMAPEHAS MQRITEKSDV YSYGVVLLEV LTGKHPLDPD LPGGAHLVKW VRDHLAEKKD PSRLLDPRLD
1001: GRTDSIMHEM LQTLAVAFLC VSNKANERPL MKDVVAMLTE IRHIDVGRSE TEKIKAGGCG SKEPQQFMSN EKIINSHGSS NCSFAFSDDS V
Arabidopsis Description
RGI3LRR receptor-like serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:C0LGR3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.