Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89328 | Canola | cytosol | 74.15 | 87.74 |
| Bra026425.1-P | Field mustard | cytosol | 74.06 | 87.64 |
| CDX94319 | Canola | cytosol | 73.97 | 87.53 |
| AT5G56040.2 | Thale cress | plasma membrane | 78.92 | 78.99 |
| VIT_19s0015g01120.t01 | Wine grape | plasma membrane | 64.07 | 68.4 |
| KRG98433 | Soybean | plasma membrane | 67.0 | 67.06 |
| KRH46430 | Soybean | plasma membrane | 66.64 | 66.58 |
| PGSC0003DMT400057334 | Potato | plasma membrane | 65.99 | 66.48 |
| Solyc07g065860.2.1 | Tomato | plasma membrane | 65.81 | 66.36 |
| KRH14195 | Soybean | plasma membrane | 65.63 | 65.51 |
| KRH73937 | Soybean | plasma membrane | 64.8 | 65.46 |
| Os08t0493800-01 | Rice | plasma membrane | 51.88 | 59.96 |
| EES15451 | Sorghum | plasma membrane | 59.95 | 59.51 |
| GSMUA_Achr3P10820_001 | Banana | plasma membrane | 46.29 | 59.2 |
| GSMUA_Achr9P19720_001 | Banana | plasma membrane | 47.57 | 59.18 |
| Zm00001d052835_P001 | Maize | plasma membrane | 59.21 | 58.41 |
| Zm00001d005986_P001 | Maize | plasma membrane | 58.39 | 58.07 |
| TraesCS7D01G234800.2 | Wheat | plasma membrane | 58.2 | 57.89 |
| TraesCS7B01G133000.1 | Wheat | plasma membrane | 58.11 | 57.74 |
| TraesCS5D01G262400.1 | Wheat | plasma membrane | 57.93 | 57.72 |
| TraesCS7A01G234800.1 | Wheat | plasma membrane | 58.02 | 57.49 |
| TraesCS5B01G253700.1 | Wheat | plasma membrane | 57.65 | 57.44 |
| TraesCS5A01G254600.1 | Wheat | plasma membrane | 57.47 | 57.26 |
| KXG35861 | Sorghum | plastid | 59.03 | 56.74 |
| Zm00001d020862_P001 | Maize | plastid | 58.75 | 56.33 |
| HORVU7Hr1G048140.2 | Barley | plasma membrane, plastid | 57.93 | 55.83 |
| HORVU5Hr1G071340.2 | Barley | plastid | 57.47 | 55.1 |
| Os09t0479200-01 | Rice | extracellular | 12.83 | 51.28 |
| AT3G24240.1 | Thale cress | plasma membrane | 47.66 | 45.57 |
| AT5G48940.1 | Thale cress | plasma membrane | 46.29 | 44.49 |
| AT1G34110.1 | Thale cress | extracellular, plasma membrane | 42.9 | 43.66 |
| AT5G63930.1 | Thale cress | plasma membrane | 37.67 | 37.3 |
| AT2G33170.1 | Thale cress | plasma membrane | 37.12 | 36.03 |
| AT3G49670.1 | Thale cress | plasma membrane | 32.81 | 35.73 |
| AT4G28650.1 | Thale cress | plasma membrane | 33.0 | 35.54 |
| AT5G65700.1 | Thale cress | plasma membrane | 32.54 | 35.39 |
| AT1G17230.2 | Thale cress | plasma membrane | 36.39 | 35.04 |
| AT4G20270.1 | Thale cress | plasma membrane | 31.81 | 34.98 |
| AT1G75820.1 | Thale cress | plasma membrane | 31.07 | 34.59 |
| AT5G61480.1 | Thale cress | plasma membrane | 31.9 | 33.43 |
| AT1G08590.1 | Thale cress | plasma membrane | 31.35 | 33.24 |
| AT1G17750.1 | Thale cress | plasma membrane | 32.17 | 32.26 |
| AT1G73080.1 | Thale cress | plasma membrane | 33.0 | 32.06 |
| AT5G51350.1 | Thale cress | plasma membrane | 25.48 | 31.06 |
| AT4G20140.1 | Thale cress | plasma membrane | 34.56 | 30.18 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.8.2 | MapMan:18.4.1.11 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | PDB:5HYX |
| PDB:5HZ0 | PDB:5HZ1 | PDB:5HZ3 | EntrezGene:828760 | ProteinID:AEE85216.1 | EMBL:AF436829 |
| ArrayExpress:AT4G26540 | EnsemblPlantsGene:AT4G26540 | RefSeq:AT4G26540 | TAIR:AT4G26540 | RefSeq:AT4G26540-TAIR-G | EnsemblPlants:AT4G26540.1 |
| TAIR:AT4G26540.1 | Unigene:At.20959 | UniProt:C0LGR3 | ProteinID:CAA18216.1 | ProteinID:CAB79509.1 | EMBL:FJ708754 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| RefSeq:NP_567748.5 | PFAM:PF00069 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000230 | PO:PO:0000293 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27000 | PANTHER:PTHR27000:SF186 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00365 | SMART:SM00369 | SUPFAM:SSF52047 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000195FE94 | SEG:seg | : |
Description
RGI3LRR receptor-like serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:C0LGR3]
Coordinates
chr4:-:13394447..13398307
Molecular Weight (calculated)
119536.0 Da
IEP (calculated)
6.137
GRAVY (calculated)
-0.037
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPNIYRLSF FSSLLCFFFI PCFSLDQQGQ ALLSWKSQLN ISGDAFSSWH VADTSPCNWV GVKCNRRGEV SEIQLKGMDL QGSLPVTSLR SLKSLTSLTL
0101: SSLNLTGVIP KEIGDFTELE LLDLSDNSLS GDIPVEIFRL KKLKTLSLNT NNLEGHIPME IGNLSGLVEL MLFDNKLSGE IPRSIGELKN LQVLRAGGNK
0201: NLRGELPWEI GNCENLVMLG LAETSLSGKL PASIGNLKRV QTIAIYTSLL SGPIPDEIGY CTELQNLYLY QNSISGSIPT TIGGLKKLQS LLLWQNNLVG
0301: KIPTELGNCP ELWLIDFSEN LLTGTIPRSF GKLENLQELQ LSVNQISGTI PEELTNCTKL THLEIDNNLI TGEIPSLMSN LRSLTMFFAW QNKLTGNIPQ
0401: SLSQCRELQA IDLSYNSLSG SIPKEIFGLR NLTKLLLLSN DLSGFIPPDI GNCTNLYRLR LNGNRLAGSI PSEIGNLKNL NFVDISENRL VGSIPPAISG
0501: CESLEFLDLH TNSLSGSLLG TTLPKSLKFI DFSDNALSST LPPGIGLLTE LTKLNLAKNR LSGEIPREIS TCRSLQLLNL GENDFSGEIP DELGQIPSLA
0601: ISLNLSCNRF VGEIPSRFSD LKNLGVLDVS HNQLTGNLNV LTDLQNLVSL NISYNDFSGD LPNTPFFRRL PLSDLASNRG LYISNAISTR PDPTTRNSSV
0701: VRLTILILVV VTAVLVLMAV YTLVRARAAG KQLLGEEIDS WEVTLYQKLD FSIDDIVKNL TSANVIGTGS SGVVYRITIP SGESLAVKKM WSKEESGAFN
0801: SEIKTLGSIR HRNIVRLLGW CSNRNLKLLF YDYLPNGSLS SRLHGAGKGG CVDWEARYDV VLGVAHALAY LHHDCLPTII HGDVKAMNVL LGPHFEPYLA
0901: DFGLARTISG YPNTGIDLAK PTNRPPMAGS YGYMAPEHAS MQRITEKSDV YSYGVVLLEV LTGKHPLDPD LPGGAHLVKW VRDHLAEKKD PSRLLDPRLD
1001: GRTDSIMHEM LQTLAVAFLC VSNKANERPL MKDVVAMLTE IRHIDVGRSE TEKIKAGGCG SKEPQQFMSN EKIINSHGSS NCSFAFSDDS V
0101: SSLNLTGVIP KEIGDFTELE LLDLSDNSLS GDIPVEIFRL KKLKTLSLNT NNLEGHIPME IGNLSGLVEL MLFDNKLSGE IPRSIGELKN LQVLRAGGNK
0201: NLRGELPWEI GNCENLVMLG LAETSLSGKL PASIGNLKRV QTIAIYTSLL SGPIPDEIGY CTELQNLYLY QNSISGSIPT TIGGLKKLQS LLLWQNNLVG
0301: KIPTELGNCP ELWLIDFSEN LLTGTIPRSF GKLENLQELQ LSVNQISGTI PEELTNCTKL THLEIDNNLI TGEIPSLMSN LRSLTMFFAW QNKLTGNIPQ
0401: SLSQCRELQA IDLSYNSLSG SIPKEIFGLR NLTKLLLLSN DLSGFIPPDI GNCTNLYRLR LNGNRLAGSI PSEIGNLKNL NFVDISENRL VGSIPPAISG
0501: CESLEFLDLH TNSLSGSLLG TTLPKSLKFI DFSDNALSST LPPGIGLLTE LTKLNLAKNR LSGEIPREIS TCRSLQLLNL GENDFSGEIP DELGQIPSLA
0601: ISLNLSCNRF VGEIPSRFSD LKNLGVLDVS HNQLTGNLNV LTDLQNLVSL NISYNDFSGD LPNTPFFRRL PLSDLASNRG LYISNAISTR PDPTTRNSSV
0701: VRLTILILVV VTAVLVLMAV YTLVRARAAG KQLLGEEIDS WEVTLYQKLD FSIDDIVKNL TSANVIGTGS SGVVYRITIP SGESLAVKKM WSKEESGAFN
0801: SEIKTLGSIR HRNIVRLLGW CSNRNLKLLF YDYLPNGSLS SRLHGAGKGG CVDWEARYDV VLGVAHALAY LHHDCLPTII HGDVKAMNVL LGPHFEPYLA
0901: DFGLARTISG YPNTGIDLAK PTNRPPMAGS YGYMAPEHAS MQRITEKSDV YSYGVVLLEV LTGKHPLDPD LPGGAHLVKW VRDHLAEKKD PSRLLDPRLD
1001: GRTDSIMHEM LQTLAVAFLC VSNKANERPL MKDVVAMLTE IRHIDVGRSE TEKIKAGGCG SKEPQQFMSN EKIINSHGSS NCSFAFSDDS V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.