Factsheet for AT5G56040.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
endoplasmic reticulum 5
plasma membrane 7
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17379	Canola	plasma membrane	90.73	90.98
CDY28619	Canola	plasma membrane	88.62	90.62
Bra002855.1-P	Field mustard	plasma membrane	90.37	90.62
AT4G26540.1	Thale cress	plasma membrane	78.99	78.92
VIT_19s0015g01120.t01	Wine grape	plasma membrane	63.76	68.0
KRG98433	Soybean	plasma membrane	66.88	66.88
KRH46430	Soybean	plasma membrane	66.79	66.67
PGSC0003DMT400057334	Potato	plasma membrane	65.96	66.39
Solyc07g065860.2.1	Tomato	plasma membrane	65.69	66.17
KRH73937	Soybean	plasma membrane	63.3	63.89
KRH14195	Soybean	plasma membrane	63.49	63.31
GSMUA_Achr9P19720_001	Banana	plasma membrane	48.26	59.98
GSMUA_Achr3P10820_001	Banana	plasma membrane	46.61	59.55
Os08t0493800-01	Rice	plasma membrane	51.47	59.43
EES15451	Sorghum	plasma membrane	58.81	58.33
Zm00001d052835_P001	Maize	plasma membrane	58.53	57.69
TraesCS5D01G262400.1	Wheat	plasma membrane	57.89	57.63
TraesCS7D01G234800.2	Wheat	plasma membrane	57.8	57.43
TraesCS5A01G254600.1	Wheat	plasma membrane	57.61	57.35
TraesCS5B01G253700.1	Wheat	plasma membrane	57.52	57.26
Zm00001d005986_P001	Maize	plasma membrane	57.61	57.25
TraesCS7B01G133000.1	Wheat	plasma membrane	57.61	57.19
TraesCS7A01G234800.1	Wheat	plasma membrane	57.71	57.13
KXG35861	Sorghum	plastid	58.26	55.95
HORVU7Hr1G048140.2	Barley	plasma membrane, plastid	57.71	55.57
Zm00001d020862_P001	Maize	plastid	57.98	55.54
HORVU5Hr1G071340.2	Barley	plastid	57.43	55.01
CDY06535	Canola	plasma membrane	79.45	54.98
Os09t0479200-01	Rice	extracellular	11.74	46.89
AT3G24240.1	Thale cress	plasma membrane	47.52	45.4
AT5G48940.1	Thale cress	plasma membrane	46.88	45.02
AT1G34110.1	Thale cress	extracellular, plasma membrane	42.11	42.82
AT5G63930.1	Thale cress	plasma membrane	37.43	37.02
AT2G33170.1	Thale cress	plasma membrane	37.43	36.3
AT3G49670.1	Thale cress	plasma membrane	33.12	36.03
AT5G65700.1	Thale cress	plasma membrane	32.48	35.29
AT1G75820.1	Thale cress	plasma membrane	31.56	35.1
AT4G20270.1	Thale cress	plasma membrane	31.93	35.08
AT1G17230.2	Thale cress	plasma membrane	36.05	34.69
AT4G28650.1	Thale cress	plasma membrane	31.74	34.16
AT1G08590.1	Thale cress	plasma membrane	31.83	33.72
AT5G61480.1	Thale cress	plasma membrane	31.47	32.95
AT1G17750.1	Thale cress	plasma membrane	32.48	32.54
AT1G73080.1	Thale cress	plasma membrane	33.21	32.24
AT5G51350.1	Thale cress	plasma membrane	25.69	31.28
AT4G20140.1	Thale cress	plasma membrane	35.23	30.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:835702
UniProt:A0A178U8R1	ProteinID:AED96714.1	ArrayExpress:AT5G56040	EnsemblPlantsGene:AT5G56040	RefSeq:AT5G56040	TAIR:AT5G56040
RefSeq:AT5G56040-TAIR-G	EnsemblPlants:AT5G56040.2	TAIR:AT5G56040.2	UniProt:F4K6B8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	RefSeq:NP_001032080.1	ProteinID:OAO90236.1	PFAM:PF00069	PFAM:PF08263
PFAM:PF13855	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF186	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00005DC16F	SEG:seg

Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6B8]

Coordinates

chr5:+:22694823..22698645

Molecular Weight (calculated)

119338.0 Da

IEP (calculated)

5.880

GRAVY (calculated)

-0.049

Length

1090 amino acids

Sequence
(BLAST)

0001: MPRNPRFCFF LFLLFHSSLF FSIPCFSIDE QGLALLSWKS QLNISGDALS SWKASESNPC QWVGIKCNER GQVSEIQLQV MDFQGPLPAT NLRQIKSLTL
0101: LSLTSVNLTG SIPKELGDLS ELEVLDLADN SLSGEIPVDI FKLKKLKILS LNTNNLEGVI PSELGNLVNL IELTLFDNKL AGEIPRTIGE LKNLEIFRAG
0201: GNKNLRGELP WEIGNCESLV TLGLAETSLS GRLPASIGNL KKVQTIALYT SLLSGPIPDE IGNCTELQNL YLYQNSISGS IPVSMGRLKK LQSLLLWQNN
0301: LVGKIPTELG TCPELFLVDL SENLLTGNIP RSFGNLPNLQ ELQLSVNQLS GTIPEELANC TKLTHLEIDN NQISGEIPPL IGKLTSLTMF FAWQNQLTGI
0401: IPESLSQCQE LQAIDLSYNN LSGSIPNGIF EIRNLTKLLL LSNYLSGFIP PDIGNCTNLY RLRLNGNRLA GNIPAEIGNL KNLNFIDISE NRLIGNIPPE
0501: ISGCTSLEFV DLHSNGLTGG LPGTLPKSLQ FIDLSDNSLT GSLPTGIGSL TELTKLNLAK NRFSGEIPRE ISSCRSLQLL NLGDNGFTGE IPNELGRIPS
0601: LAISLNLSCN HFTGEIPSRF SSLTNLGTLD VSHNKLAGNL NVLADLQNLV SLNISFNEFS GELPNTLFFR KLPLSVLESN KGLFISTRPE NGIQTRHRSA
0701: VKVTMSILVA ASVVLVLMAV YTLVKAQRIT GKQEELDSWE VTLYQKLDFS IDDIVKNLTS ANVIGTGSSG VVYRVTIPSG ETLAVKKMWS KEENRAFNSE
0801: INTLGSIRHR NIIRLLGWCS NRNLKLLFYD YLPNGSLSSL LHGAGKGSGG ADWEARYDVV LGVAHALAYL HHDCLPPILH GDVKAMNVLL GSRFESYLAD
0901: FGLAKIVSGE GVTDGDSSKL SNRPPLAGSY GYMAPEHASM QHITEKSDVY SYGVVLLEVL TGKHPLDPDL PGGAHLVQWV RDHLAGKKDP REILDPRLRG
1001: RADPIMHEML QTLAVSFLCV SNKASDRPMM KDIVAMLKEI RQFDMDRSES DMIKGGKCEK WQPQPLPPEK IVSTPRGSSN CSFAYSDESV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.