Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19929 | Canola | cytosol | 66.26 | 90.06 |
| CDY56672 | Canola | cytosol | 66.08 | 89.93 |
| Bra036154.1-P | Field mustard | plasma membrane | 88.19 | 88.82 |
| VIT_07s0005g05420.t01 | Wine grape | plasma membrane | 57.62 | 66.94 |
| PGSC0003DMT400040886 | Potato | plasma membrane | 66.52 | 66.87 |
| Solyc09g061940.1.1 | Tomato | plasma membrane | 65.81 | 66.22 |
| KRH46804 | Soybean | plasma membrane | 65.9 | 64.87 |
| KRG99860 | Soybean | plasma membrane | 65.37 | 64.63 |
| AT3G24240.1 | Thale cress | plasma membrane | 60.44 | 60.12 |
| GSMUA_Achr8P12880_001 | Banana | plasma membrane | 35.95 | 58.54 |
| Os04t0132500-01 | Rice | plasma membrane | 56.12 | 55.54 |
| Zm00001d025002_P001 | Maize | plasma membrane | 56.48 | 55.31 |
| EES10396 | Sorghum | plasma membrane | 56.39 | 54.61 |
| GSMUA_Achr11P... | Banana | plasma membrane | 34.71 | 54.42 |
| TraesCS2D01G013700.1 | Wheat | plasma membrane | 55.07 | 54.02 |
| TraesCS2B01G005000.1 | Wheat | plasma membrane | 55.42 | 53.99 |
| TraesCS2A01G012900.1 | Wheat | plasma membrane | 55.24 | 53.73 |
| HORVU0Hr1G001770.1 | Barley | mitochondrion, plasma membrane, plastid | 47.4 | 53.64 |
| TraesCS4D01G005000.1 | Wheat | plasma membrane | 49.43 | 52.38 |
| TraesCSU01G061100.1 | Wheat | plastid | 45.64 | 48.73 |
| AT5G56040.2 | Thale cress | plasma membrane | 45.02 | 46.88 |
| AT4G26540.1 | Thale cress | plasma membrane | 44.49 | 46.29 |
| AT1G34110.1 | Thale cress | extracellular, plasma membrane | 43.44 | 45.99 |
| TraesCS3D01G534900.1 | Wheat | plasma membrane | 40.09 | 45.0 |
| AT4G20270.1 | Thale cress | plasma membrane | 33.04 | 37.8 |
| AT4G28650.1 | Thale cress | plasma membrane | 33.48 | 37.51 |
| AT3G49670.1 | Thale cress | plasma membrane | 32.33 | 36.63 |
| AT5G63930.1 | Thale cress | plasma membrane | 35.42 | 36.48 |
| AT2G33170.1 | Thale cress | plasma membrane | 36.12 | 36.48 |
| AT1G08590.1 | Thale cress | plasma membrane | 32.6 | 35.96 |
| AT5G61480.1 | Thale cress | plasma membrane | 32.95 | 35.93 |
| AT5G65700.1 | Thale cress | plasma membrane | 31.63 | 35.79 |
| AT1G75820.1 | Thale cress | plasma membrane | 30.75 | 35.61 |
| AT1G17230.2 | Thale cress | plasma membrane | 35.51 | 35.57 |
| AT1G73080.1 | Thale cress | plasma membrane | 32.33 | 32.68 |
| AT1G17750.1 | Thale cress | plasma membrane | 30.13 | 31.43 |
| AT4G20140.1 | Thale cress | plasma membrane | 34.1 | 30.98 |
| AT5G51350.1 | Thale cress | plasma membrane | 23.0 | 29.16 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.8.2 | MapMan:18.4.1.11 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:834952 |
| ProteinID:AED95745.1 | EMBL:AJ550162 | ArrayExpress:AT5G48940 | EnsemblPlantsGene:AT5G48940 | RefSeq:AT5G48940 | TAIR:AT5G48940 |
| RefSeq:AT5G48940-TAIR-G | EnsemblPlants:AT5G48940.1 | TAIR:AT5G48940.1 | Unigene:At.29816 | ProteinID:BAB10317.1 | UniProt:C0LGV1 |
| EMBL:FJ708795 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 |
| InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_199705.2 |
| PFAM:PF07714 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000005 | PO:PO:0009005 | PRINTS:PR00019 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51450 | PANTHER:PTHR27000 | PANTHER:PTHR27000:SF290 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00365 | SMART:SM00369 | SUPFAM:SSF52047 |
| SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000034F2DD |
| SEG:seg | : | : | : | : | : |
Description
RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
Coordinates
chr5:+:19839663..19843859
Molecular Weight (calculated)
123619.0 Da
IEP (calculated)
5.417
GRAVY (calculated)
-0.011
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.