Factsheet for GSMUA_Achr8P12880_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane	70.59	67.96
VIT_07s0005g05420.t01	Wine grape	plasma membrane	58.82	41.97
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	58.82	40.88
CDY56672	Canola	cytosol	48.64	40.65
Os04t0132500-01	Rice	plasma membrane	66.86	40.63
CDY19929	Canola	cytosol	48.49	40.48
Zm00001d025002_P001	Maize	plasma membrane	67.0	40.29
EES10396	Sorghum	plasma membrane	66.57	39.59
TraesCS4D01G005000.1	Wheat	plasma membrane	60.83	39.59
VIT_05s0051g00540.t01	Wine grape	plasma membrane	63.56	38.83
TraesCS2A01G012900.1	Wheat	plasma membrane	64.85	38.73
TraesCS2B01G005000.1	Wheat	plasma membrane	64.71	38.71
TraesCS2D01G013700.1	Wheat	plasma membrane	64.13	38.63
TraesCSU01G061100.1	Wheat	plastid	57.53	37.72
Solyc09g091400.2.1	Tomato	plasma membrane	59.97	37.09
KRH75100	Soybean	plasma membrane, plastid	58.97	36.96
PGSC0003DMT400040886	Potato	plasma membrane	59.68	36.85
Solyc09g061940.1.1	Tomato	plasma membrane	59.54	36.79
KRH70959	Soybean	plastid	58.82	36.0
AT5G48940.1	Thale cress	plasma membrane	58.54	35.95
Bra036154.1-P	Field mustard	plasma membrane	57.96	35.85
KRG99860	Soybean	plasma membrane	58.54	35.54
KRH46804	Soybean	plasma membrane	58.54	35.39
AT3G24240.1	Thale cress	plasma membrane	57.25	34.97
Bra014998.1-P	Field mustard	plasma membrane	56.67	34.86
CDX77472	Canola	plasma membrane	56.53	34.77
CDX85146	Canola	plasma membrane	54.52	34.42
PGSC0003DMT400076250	Potato	plasma membrane	59.83	33.9
GSMUA_Achr10P...	Banana	plastid	34.86	32.4
TraesCS3D01G534900.1	Wheat	plasma membrane	46.2	31.85
GSMUA_Achr1P06510_001	Banana	cytosol	30.85	31.02
GSMUA_Achr2P15820_001	Banana	plasma membrane	38.16	30.68
GSMUA_Achr10P...	Banana	plasma membrane	42.32	30.48
GSMUA_Achr3P20720_001	Banana	plasma membrane	37.45	30.07
GSMUA_Achr6P22870_001	Banana	plasma membrane	29.27	28.73
GSMUA_Achr3P10820_001	Banana	plasma membrane	35.01	28.6
GSMUA_Achr5P16960_001	Banana	plasma membrane	31.13	28.33
GSMUA_Achr1P03380_001	Banana	plasma membrane	30.13	27.89
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	31.56	27.53
GSMUA_Achr7P23450_001	Banana	plasma membrane, vacuole	29.7	27.53
GSMUA_Achr9P19720_001	Banana	plasma membrane	34.58	27.48
GSMUA_Achr5P02010_001	Banana	plasma membrane, vacuole	28.69	27.21
GSMUA_Achr9P00190_001	Banana	plasma membrane	30.13	27.2
GSMUA_Achr4P28370_001	Banana	plasma membrane	34.15	27.05
GSMUA_Achr9P24170_001	Banana	plasma membrane	31.13	26.63
GSMUA_Achr4P14590_001	Banana	cytosol	26.97	26.26
GSMUA_Achr4P25040_001	Banana	plasma membrane	34.15	26.21
GSMUA_Achr8P27460_001	Banana	plasma membrane	28.55	26.01
GSMUA_Achr7P00790_001	Banana	plasma membrane	28.55	25.48
GSMUA_Achr4P03140_001	Banana	plasma membrane	27.69	25.29
GSMUA_Achr7P27590_001	Banana	golgi, plasma membrane	22.38	25.16
GSMUA_Achr11P...	Banana	plasma membrane	27.69	24.87
GSMUA_Achr3P16610_001	Banana	plasma membrane	27.26	24.8
GSMUA_Achr4P32160_001	Banana	plasma membrane	26.26	24.43
GSMUA_Achr8P12800_001	Banana	plasma membrane	30.85	24.43
GSMUA_Achr6P07350_001	Banana	plasma membrane	23.96	24.42
GSMUA_Achr3P30640_001	Banana	plasma membrane	27.83	23.57
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	20.66	23.57
GSMUA_Achr4P04790_001	Banana	plasma membrane	27.98	23.27
GSMUA_Achr2P04260_001	Banana	plasma membrane	26.26	23.25
GSMUA_Achr8P29350_001	Banana	plasma membrane	22.96	22.96
GSMUA_Achr4P07370_001	Banana	plasma membrane	25.54	22.73
PGSC0003DMT400076247	Potato	cytosol	5.02	20.23

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G12880_001	EnsemblPlants:GSMUA_Achr8P12880_001	EnsemblPlants:GSMUA_Achr8T12880_001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0TPZ1	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000294CE22	SEG:seg	:	:	:

Description

Putative LRR receptor-like serine/threonine-protein kinase RCH1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G12880_001]

Coordinates

chr8:-:9656432..9661065

Molecular Weight (calculated)

74220.0 Da

IEP (calculated)

6.190

GRAVY (calculated)

0.214

Length

697 amino acids

Sequence
(BLAST)

001: MPRSRSRSRQ AGHPPSFPCH NCLLLPLFRF CFLLPLILLL PSFSSSSLAS ANQEVTALYR WINSSSSSPL SRALSDWNPA HATPCKWSHI TCNAAGSVST
101: ITIQSVPLTI SGPIPASLGR LSNLQTLSIY TTMLSGSIPP ELGNCSSLVN LYLYENSLSG PLPPSLGRLP KLERLLLWQN VLSGPIPDEF GGLSSLRSMD
201: LSINSISGAI PPSLGALSNL QDLMLNTNQI SGLIPAEFAA LKSLAVFFAW QNLLEGAIPL SLASLSNLQA LDLSHNHLTG PMPPGLFLLR NLTKLMLLSN
301: DISGPIPAEI GSLDFLDLSA NRLTGPVPAS IGNCSQLQMV NLSNNTLSGA VPDSLSWITR LEVLDLSLNQ LTGPIPGSFG KLASINKLVL SGNSLTGPIP
401: PSLGRCLNLE LLDLSSNQLT GGIPDDLCLI EGLDIALNLS RNALTGPIPE KISILKNLLS ASDLAGNQGL CTHGGDVVHR LKLAIALLIT STVAMLLGLI
501: ATIRAKRMAA GNGSEDDDSE TGGGILVDAN VIGKGCSGVV YRDCNSSRVR DSFSAEVRTL GSIRHKNIWD LRYQIVLGAA EGLAYLHHDC VPPIVHRDIK
601: ANNILIGLDF EAYLADFGLA KLVEDGDLAR SSNTVAGSYG YIAPEYGYMM KITEKSDVYS YGVVMLEVLT GKQPIDPTIP EGLHVWMEPK CLVSGFS

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.