Factsheet for Zm00001d025002_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10396	Sorghum	plasma membrane	88.78	87.8
Os04t0132500-01	Rice	plasma membrane	82.14	83.0
TraesCS2D01G013700.1	Wheat	plasma membrane	77.91	78.05
TraesCS2A01G012900.1	Wheat	plasma membrane	78.26	77.72
TraesCS2B01G005000.1	Wheat	plasma membrane	78.08	77.68
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	66.35	76.67
TraesCS4D01G005000.1	Wheat	plasma membrane	66.87	72.36
TraesCSU01G061100.1	Wheat	plastid	62.04	67.64
GSMUA_Achr8P12880_001	Banana	plasma membrane	40.29	67.0
GSMUA_Achr11P...	Banana	plasma membrane	41.24	66.02
CDY56672	Canola	cytosol	44.26	61.51
VIT_07s0005g05420.t01	Wine grape	plasma membrane	51.6	61.21
CDY19929	Canola	cytosol	44.09	61.2
VIT_05s0051g00540.t01	Wine grape	plasma membrane	59.36	60.3
Solyc09g091400.2.1	Tomato	plasma membrane	57.72	59.36
KRH75100	Soybean	plasma membrane, plastid	55.65	58.0
PGSC0003DMT400040886	Potato	plasma membrane	56.26	57.75
KRH70959	Soybean	plastid	56.6	57.59
Solyc09g061940.1.1	Tomato	plasma membrane	55.74	57.27
Bra036154.1-P	Field mustard	plasma membrane	55.65	57.23
CDX77472	Canola	plasma membrane	55.48	56.75
Bra014998.1-P	Field mustard	plasma membrane	55.39	56.66
CDX85146	Canola	plasma membrane	53.84	56.52
AT5G48940.1	Thale cress	plasma membrane	55.31	56.48
KRH46804	Soybean	plasma membrane	55.65	55.94
KRG99860	Soybean	plasma membrane	55.13	55.66
AT3G24240.1	Thale cress	plasma membrane	54.79	55.65
PGSC0003DMT400076247	Potato	cytosol	8.28	55.49
PGSC0003DMT400076250	Potato	plasma membrane	57.98	54.63
Zm00001d052835_P001	Maize	plasma membrane	44.87	47.02
Zm00001d005986_P001	Maize	plasma membrane	44.09	46.58
Zm00001d008715_P001	Maize	plasma membrane	43.74	45.43
Zm00001d046485_P001	Maize	plasma membrane	41.59	44.67
Zm00001d020862_P001	Maize	plastid	43.57	44.38
Zm00001d037672_P001	Maize	plasma membrane	42.45	44.17
Zm00001d018752_P001	Maize	mitochondrion, plasma membrane	34.25	38.28
Zm00001d018807_P001	Maize	plasma membrane	36.32	38.1
Zm00001d014793_P001	Maize	plasma membrane	32.36	37.65
Zm00001d013162_P001	Maize	plasma membrane	32.53	36.67
Zm00001d034240_P004	Maize	plasma membrane	32.44	36.33
Zm00001d048390_P001	Maize	plasma membrane	32.61	36.1
Zm00001d007254_P001	Maize	plasma membrane	32.18	36.04
Zm00001d048968_P001	Maize	plasma membrane	32.36	36.02
Zm00001d014971_P001	Maize	plasma membrane	32.1	36.01
Zm00001d027645_P001	Maize	plasma membrane	32.18	35.87
Zm00001d039218_P002	Maize	plasma membrane	30.89	35.84
Zm00001d003101_P007	Maize	plasma membrane	33.91	35.83
Zm00001d049588_P001	Maize	plasma membrane	31.32	35.52
Zm00001d028317_P001	Maize	plasma membrane	31.41	35.24
Zm00001d031427_P001	Maize	plasma membrane	32.18	34.28
Zm00001d030323_P001	Maize	plasma membrane	30.03	31.49
Zm00001d021535_P001	Maize	mitochondrion, plasma membrane	33.65	30.95
Zm00001d032116_P003	Maize	mitochondrion, plasma membrane	30.54	30.15
Zm00001d050074_P002	Maize	plasma membrane	30.37	30.09

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:103641486	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:AQK42650.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	UniProt:K7UH69	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	UniParc:UPI0002216B65	EnsemblPlantsGene:Zm00001d025002	EnsemblPlants:Zm00001d025002_P001	EnsemblPlants:Zm00001d025002_T001	SEG:seg

Description

Putative leucine-rich repeat receptor protein kinase family protein

Coordinates

chr10:-:98768633..98772676

Molecular Weight (calculated)

122148.0 Da

IEP (calculated)

6.466

GRAVY (calculated)

0.147

Length

1159 amino acids

Sequence
(BLAST)

0001: MRLPLPLPSP SPMRRRHLPL PLPLLPLVLL HLLFAASSGS PSSEVAFLTA WLNTTAARPP DWSPAALSPC NWSHVSCAGG TGETGAVTSV SFQSVHLAVP
0101: LPAGLCAALP GLVSFVVSDA NLTGGVPDDL WRCRRLTVLD ISGNALTGSI PSSLGNATAL ENLALNSNQL SGPIPPELAA LAPTLRNLLL FDNRLSGELP
0201: PSLGDLLLLE SLRAGGNHDL AGLIPESFSR LSSLVVLGLA DTKISGPLPA SLGQLQSLQT LSIYTTALSG AIPPELGNCS NLTSIYLYEN SLSGPLPPSL
0301: GALPRLQKLL LWQNALTGPI PESFGNLTSL VSLDLSINSI SGTIPASLGR LPALQDLMLS DNNITGTIPP LLANATSLVQ LQVDTNEISG LIPPELGRLS
0401: GLQVLFAWQN QLEGAIPATL ASLANLQALD LSHNHLTGII PPGLFLLRNL TKLLLLSNDL SGPLPLEIGK AASLVRLRLG GNRIAGSIPA SVSGMKSINF
0501: LDLGSNRLAG PVPAELGNCS QLQMLDLSNN SLTGPLPVSL AAVHGLQELD VSHNRLNGAV PDALGRLETL SRLVLSGNSL SGPIPPALGQ CRNLELLDLS
0601: DNVLTGNIPD ELCGIDGLDI ALNLSRNALT GPIPAKISEL SKLSVLDLSY NALNGNLAPL AGLDNLVTLN VSNNNFSGYL PDTKLFRQLS TSCLAGNSGL
0701: CTKGGDVCFV SIDANGNPVT STAEEAQRVH RLKIAIALLV TATVAMVLGM MGILRARRMG FGGKSGGRSS DSESGGELSW PWQFTPFQKL SFSVDQVVRS
0801: LVDANIIGKG CSGVVYRVSI DTGEVIAVKK LWPSTQTAAT SKDDGTSGRV RDSFSAEVRT LGSIRHKNIV RFLGCCWNKS TRLLMYDYMA NGSLGAVLHE
0901: RRGAGAQLEW DVRYRIVLGA AQGIAYLHHD CVPPIVHRDI KANNILIGLD FEAYIADFGL AKLVEDGDFG RSSNTVAGSY GYIAPEYGYM MKITEKSDVY
1001: SYGVVVLEVL TGKQPIDPTI PDGLHVVDWV RRCRDRAGVL DPALRRRSSS EVEEMLQVMG VALLCVSAAP DDRPTMKDVA AMLKEIRLER EDVANVDVLL
1101: KGGSSPPHHV HANAAAIADK ATSSTSSTPP CPQGPSNSCS SSSFSAIYSL SNKAKSPFG

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.