Factsheet for Bra036154.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19929	Canola	cytosol	73.47	99.16
AT5G48940.1	Thale cress	plasma membrane	88.82	88.19
PGSC0003DMT400040886	Potato	plasma membrane	66.73	66.61
Solyc09g061940.1.1	Tomato	plasma membrane	66.37	66.31
VIT_07s0005g05420.t01	Wine grape	plasma membrane	57.41	66.22
KRG99860	Soybean	plasma membrane	65.22	64.02
KRH46804	Soybean	plasma membrane	65.48	64.01
Bra014998.1-P	Field mustard	plasma membrane	60.6	60.28
GSMUA_Achr8P12880_001	Banana	plasma membrane	35.85	57.96
Os04t0132500-01	Rice	plasma membrane	57.68	56.67
Zm00001d025002_P001	Maize	plasma membrane	57.23	55.65
TraesCS2D01G013700.1	Wheat	plasma membrane	56.61	55.14
EES10396	Sorghum	plasma membrane	57.32	55.12
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	48.98	55.03
TraesCS2B01G005000.1	Wheat	plasma membrane	56.79	54.94
TraesCS2A01G012900.1	Wheat	plasma membrane	56.79	54.84
GSMUA_Achr11P...	Banana	plasma membrane	34.87	54.28
TraesCS4D01G005000.1	Wheat	plasma membrane	50.75	53.41
TraesCSU01G061100.1	Wheat	plastid	46.58	49.39
Bra026425.1-P	Field mustard	cytosol	39.75	48.59
Bra002855.1-P	Field mustard	plasma membrane	45.61	47.29
TraesCS3D01G534900.1	Wheat	plasma membrane	40.73	45.4
Bra034446.1-P	Field mustard	plasma membrane	44.01	45.3
Bra038810.1-P	Field mustard	cytosol, nucleus, plasma membrane	30.35	40.52
Bra020928.1-P	Field mustard	cytosol, plasma membrane, plastid	29.99	40.05
Bra013451.1-P	Field mustard	plasma membrane	32.74	38.2
Bra011046.1-P	Field mustard	plasma membrane	33.54	37.2
Bra015812.1-P	Field mustard	cytosol	24.93	36.97
Bra012925.1-P	Field mustard	plasma membrane	32.56	36.96
Bra012952.1-P	Field mustard	plasma membrane	33.27	36.91
Bra008505.1-P	Field mustard	plasma membrane	35.23	36.46
Bra024413.1-P	Field mustard	plasma membrane, plastid	32.21	36.41
Bra025988.1-P	Field mustard	plasma membrane	35.76	36.31
Bra030734.1-P	Field mustard	plasma membrane	32.74	36.14
Bra021831.1-P	Field mustard	plasma membrane	35.31	35.44
Bra003858.1-P	Field mustard	cytosol	26.97	34.47
Bra013446.1-P	Field mustard	mitochondrion	31.14	32.44
Bra039525.1-P	Field mustard	plasma membrane	34.69	31.46
Bra025113.1-P	Field mustard	plasma membrane	34.52	31.37
Bra025951.1-P	Field mustard	plasma membrane	31.59	19.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra036154
EnsemblPlants:Bra036154.1	EnsemblPlants:Bra036154.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4F500	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000
PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541EC6	SEG:seg

Description

AT5G48940 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA09:+:2428412..2432217

Molecular Weight (calculated)

121979.0 Da

IEP (calculated)

5.148

GRAVY (calculated)

0.017

Length

1127 amino acids

Sequence
(BLAST)

0001: MPIPRKVLTV TLFSLFLPFF ISSASASSNE VAALVSWLRS SNSPPPTAFS SWNPSDSDPC HWPYITCSSS DKLVTEINVV SLQLALPFPP NISTFTSLQK
0101: LVISNTNLTG SISSDVGDCS QLRVIDLSSN SLVGEIPSSL GKLKNLQELI LNSNGLTGKI PSELGGCVSL KNLDIFDNFL SGTLPSELGK ISTLESLRAG
0201: GNSELSGKIP EEIGNCRNLT VLGLAATKIS GNLPVTLGQL TKLETISVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPRELGQLQN LEKMLLWQND
0301: LHGPIPEEIG FIKSLNAVDL SMNSFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSVLSNC TRLVQLQIDA NQISGLIPPE IGLLKELNIF LGWQNKLEGN
0401: IPTELAGCQN LQALDLSQNL LTGALPPGLF QLRNLTKLLL ISNSISGVIP PEIGSCTSLV RLRLVNNKIT GEIPKELGLL ENLSFLDLSE NSLSGPVPWE
0501: ISNCRQLQML NLSNNTLRGS LPLSLSSLTK LQVLDVSSND LTGKLPDSLG QLLSLNRLIL SKNSFSGEIP PSLGHCMNLQ LLDLSSNNIS GAIPEELFDI
0601: QDLDIALNLS WNSLVGFIPA RISALNRLSV LDISHNMLSG DLLALSGLEN LVSLNISHNR FSGYLPDSKV FRQLVAEEME GNSGLCSKGL RSCFVSNSTL
0701: LNTQHGGDFA HSQRLKIAIG LLISVTIVLA VLGVLAVLRA RQMIQEGNDS EKGENLWTWQ FTPFQKLNFT VEHVLKCLVE GNVIGKGCSG VVYRAEMPNQ
0801: EVIAVKKLWP VTVTVAKTSG GRDSFSAEVK TLGSIRHKNI VRFLGCCWNK NTRLLMYDYM SNGSLGSLLH ERSGECSLGW EVRYKIILGA AQGLAYLHHD
0901: CVPPIVHRDI KANNILIGPD FEPYIGDFGL AKLVDDGDFA RSSKTIAGSY GYIAPEYGYS MKITEKSDVY SFGVVVLEVL TGKEPIDPTI PDGLHIVDWV
1001: KKIRDIQVID QGLQARPESE VEEVMQTLGV ALLCVNPIPE DRPTMKDVAA MLSEIRQERE EPMKGGGNNG CSGSCNNNGG EGRDESLSSS AMQQTAKYLR
1101: SSSTSFSASS LLYSSSSSTS NARPNLK

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.