Factsheet for Bra014998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77472	Canola	plasma membrane	99.56	99.56
AT3G24240.1	Thale cress	plasma membrane	91.17	90.53
VIT_05s0051g00540.t01	Wine grape	plasma membrane	69.29	68.8
Solyc09g091400.2.1	Tomato	plasma membrane	67.34	67.7
PGSC0003DMT400076247	Potato	cytosol	10.33	67.63
KRH70959	Soybean	plastid	66.46	66.11
KRH75100	Soybean	plasma membrane, plastid	64.61	65.83
PGSC0003DMT400076250	Potato	plasma membrane	67.43	62.11
Bra036154.1-P	Field mustard	plasma membrane	60.28	60.6
GSMUA_Achr8P12880_001	Banana	plasma membrane	34.86	56.67
TraesCS2D01G013700.1	Wheat	plasma membrane	56.84	55.66
Os04t0132500-01	Rice	plasma membrane	56.22	55.54
EES10396	Sorghum	plasma membrane	57.37	55.46
Zm00001d025002_P001	Maize	plasma membrane	56.66	55.39
TraesCS2B01G005000.1	Wheat	plasma membrane	56.93	55.36
TraesCS2A01G012900.1	Wheat	plasma membrane	56.75	55.1
GSMUA_Achr11P...	Banana	plasma membrane	34.69	54.28
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	47.84	54.04
TraesCS4D01G005000.1	Wheat	plasma membrane	49.69	52.57
TraesCSU01G061100.1	Wheat	plastid	46.43	49.48
Bra026425.1-P	Field mustard	cytosol	40.07	49.24
Bra002855.1-P	Field mustard	plasma membrane	46.6	48.57
TraesCS3D01G534900.1	Wheat	plasma membrane	40.51	45.4
Bra034446.1-P	Field mustard	plasma membrane	43.69	45.21
Bra038810.1-P	Field mustard	cytosol, nucleus, plasma membrane	29.3	39.34
Bra020928.1-P	Field mustard	cytosol, plasma membrane, plastid	28.77	38.63
Bra012925.1-P	Field mustard	plasma membrane	32.83	37.46
Bra025988.1-P	Field mustard	plasma membrane	36.63	37.39
Bra008505.1-P	Field mustard	plasma membrane	35.66	37.1
Bra024413.1-P	Field mustard	plasma membrane, plastid	32.48	36.91
Bra011046.1-P	Field mustard	plasma membrane	32.92	36.71
Bra013451.1-P	Field mustard	plasma membrane	31.24	36.65
Bra030734.1-P	Field mustard	plasma membrane	32.66	36.24
Bra015812.1-P	Field mustard	cytosol	24.18	36.05
Bra021831.1-P	Field mustard	plasma membrane	35.66	35.98
Bra012952.1-P	Field mustard	plasma membrane	32.22	35.93
Bra003858.1-P	Field mustard	cytosol	26.74	34.35
Bra013446.1-P	Field mustard	mitochondrion	32.22	33.73
Bra039525.1-P	Field mustard	plasma membrane	34.86	31.78
Bra025113.1-P	Field mustard	plasma membrane	33.72	30.81
Bra025951.1-P	Field mustard	plasma membrane	31.07	19.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra014998
EnsemblPlants:Bra014998.1	EnsemblPlants:Bra014998.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010449	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4DES6	PFAM:PF07714	PFAM:PF13855
PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF92
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002540D7C	SEG:seg

Description

AT3G24240 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative

Coordinates

chrA07:+:4481278..4484897

Molecular Weight (calculated)

123184.0 Da

IEP (calculated)

5.008

GRAVY (calculated)

-0.052

Length

1133 amino acids

Sequence
(BLAST)

0001: MSSPHTLISS SSFFIFILCF SLSNAEQNPE ASILYSWLHS SPLTPSSLSF FNWNSADNTP CNNNWTFITC SPQGFVTDID IQAVQVELPL PKNLPELRSL
0101: QKLTISGANI TGTIPESLGD CLALTVLDLS SNSLVGDIPW SLSKLRNLET LILNSNQLTG RIPPEISKCS KLKSLILFDN LLTGGIPSEL GKLSNLEEIR
0201: IGGNKELSGK IPPEIGDCSN LTVLGLAETS VSGNLPSSLG NLKKLQTLSI YTTMISGEIP PELGNCSELV DIFLYENSLS GSIPREISKL AKLEQLFLWQ
0301: NSLVGGIPED IGNCSNLKMI DLSLNLLSGS IPVSIGRLSF LEEFMISDNN FSGSIPTTIS NCSSLVQLQL DKNQISGLIP TELGTLTKLT LFFAWSNQLE
0401: GSIPPGLADC TDLQALDLSR NALTGTIPSG LFMLRNLTKL LLISNSLSGS IPQEIGNCSS LVRLRLGFNR ITGEIPSGVG SLKKLNFLDL SSNRLHGKVP
0501: DEIGSCSELQ MIDLSNNSLQ GSLPNAVSSL SGLQVLDVSA NQLSGKIPAS LGRLVSLNKL ILGKNLFSGS IPGSLGMCSG LQLLDLGSNE LSGEIPSELG
0601: DIENLEIALN LSSNRLSGKI PSKFASLNKL SILDISHNML EGDLAPLANI ENLVSLNISY NSFSGYLPDN KLFRQLPPQD LEGNKKLCST STKDSCFLAY
0701: GNSNGLADDK ETSRARNLRL ALALLISLTV VLMILGAVAV IRARRNNERE RDSELGESYK WQFTPFQKLN FSVDQIIRCL VEPNVIGKGC SGVVYRADVD
0801: NGDVIAVKKL WPAMVNGGND EKPDKNVRDS FSAEVKTLGT IRHKNIVRFL GCCWNRNTRL LMYDYMPNGS LGSLLHERRG SALDWDLRYR ILLGAAQGLA
0901: YLHHDCLPPI VHRDIKANNI LIGLDFEPYI ADFGLAKLVD EGDIGRCSNT VAGSYGYIAP EYGYSMKITE KSDVYSYGVV VLEVLTGKQP IDPTVPEGLH
1001: LVDWVRQNRG SLEVLDSSLR SRTEAEADEM MQVLGTALLC VNASPDERPT MKDVAAMLKE IKQEREEYAK VDLLLKKSPP PTAKTQEEGS KNEMTVAVAS
1101: SSKEMRREER IVKSNNTSFS ASSLLYSPTS SIE

Best Arabidopsis Sequence Match ( AT3G24240.1 )
(BLAST)

0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E

Arabidopsis Description

RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.