CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014998.1-P	Field mustard	plasma membrane	99.56	99.56
CDX85146	Canola	plasma membrane	95.68	98.19
AT3G24240.1	Thale cress	plasma membrane	91.0	90.36
VIT_05s0051g00540.t01	Wine grape	plasma membrane	69.11	68.62
PGSC0003DMT400076247	Potato	cytosol	10.33	67.63
Solyc09g091400.2.1	Tomato	plasma membrane	67.08	67.44
KRH70959	Soybean	plastid	66.46	66.11
KRH75100	Soybean	plasma membrane, plastid	64.61	65.83
CDY19929	Canola	cytosol	46.87	63.59
CDY56672	Canola	cytosol	46.69	63.43
PGSC0003DMT400076250	Potato	plasma membrane	67.17	61.87
GSMUA_Achr8P12880_001	Banana	plasma membrane	34.77	56.53
TraesCS2D01G013700.1	Wheat	plasma membrane	56.93	55.75
Os04t0132500-01	Rice	plasma membrane	56.31	55.62
Zm00001d025002_P001	Maize	plasma membrane	56.75	55.48
TraesCS2B01G005000.1	Wheat	plasma membrane	57.02	55.45
EES10396	Sorghum	plasma membrane	57.28	55.38
TraesCS2A01G012900.1	Wheat	plasma membrane	56.84	55.18
GSMUA_Achr11P...	Banana	plasma membrane	34.6	54.14
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	47.93	54.14
TraesCS4D01G005000.1	Wheat	plasma membrane	49.78	52.66
TraesCSU01G061100.1	Wheat	plastid	46.51	49.58
CDX94319	Canola	cytosol	40.34	49.57
CDX89328	Canola	cytosol	40.16	49.35
CDY17379	Canola	plasma membrane	46.34	48.3
CDY28619	Canola	plasma membrane	45.37	48.22
TraesCS3D01G534900.1	Wheat	plasma membrane	40.42	45.3
CDY28391	Canola	plasma membrane	42.81	45.28
CDX73290	Canola	plasma membrane	43.6	44.99
CDX98665	Canola	cytosol, nucleus, plasma membrane	29.48	39.57
CDX93999	Canola	cytosol, nucleus, plasma membrane	29.39	39.45
CDY54567	Canola	cytosol, plasma membrane, plastid	28.86	38.74
CDY23037	Canola	plasma membrane	32.66	38.26
CDY31445	Canola	cytosol, plasma membrane, plastid	28.42	38.15
CDY02112	Canola	plasma membrane	32.48	37.98
CDY26259	Canola	plastid	36.1	37.91
CDY08759	Canola	plasma membrane	32.04	37.38
CDY45620	Canola	plasma membrane	32.04	37.31
CDY35204	Canola	plasma membrane	33.01	37.21
CDY37749	Canola	plasma membrane	30.54	37.16
CDY48481	Canola	plasma membrane	36.19	37.0
CDY66353	Canola	plasma membrane	27.89	36.79
CDY23764	Canola	plasma membrane	34.51	36.71
CDY38373	Canola	plasma membrane	31.16	36.69
CDY02141	Canola	plasma membrane	28.68	36.48
CDY31136	Canola	plasma membrane	32.83	36.47
CDX97498	Canola	plasma membrane	32.83	36.43
CDY23065	Canola	plasma membrane	32.66	36.42
CDY62258	Canola	plasma membrane	27.98	36.39
CDY68314	Canola	plasma membrane	27.8	34.65
CDY37560	Canola	plasma membrane	29.66	34.53
CDY65166	Canola	plasma membrane	30.71	33.89
CDX87661	Canola	plasma membrane	28.77	33.78
CDX73202	Canola	plasma membrane	29.39	33.74
CDY11130	Canola	plasma membrane	30.54	33.46
CDX89518	Canola	cytosol	0.35	33.33
CDX68246	Canola	plasma membrane	32.04	32.91
CDX73169	Canola	plasma membrane	25.68	32.51
CDY14942	Canola	plasma membrane	34.95	31.86
CDY59496	Canola	plasma membrane	28.6	31.76
CDX96976	Canola	plasma membrane	34.69	31.62
CDY06535	Canola	plasma membrane	42.81	30.79
CDX72170	Canola	plasma membrane	22.86	29.1
CDY27242	Canola	plasma membrane	22.86	28.91

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078CL66
EnsemblPlants:CDX77472	ProteinID:CDX77472	ProteinID:CDX77472.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00128337001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF92	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EF2D01	SEG:seg	:

Description

BnaA07g06100D

Coordinates

chrLK031811:+:977807..981414

Molecular Weight (calculated)

123102.0 Da

IEP (calculated)

5.006

GRAVY (calculated)

-0.042

Length

1133 amino acids

Sequence
(BLAST)

0001: MSSPHTLISS SSFFIFILCF SLSNAEQNPE ASILYSWLHS SPLTPSSLSF FNWNSADNTP CNNNWTFVTC SPQGFVTDID IQAVQVELPL PKNLPELHSL
0101: QKLTISGANI TGTIPESLGD CLALTVLDLS SNSLVGDIPW SLSKLRNLET LILNSNQLTG RIPPEISKCS KLKSLILFDN LLTGGIPLEL GKLSGLEEIR
0201: IGGNKELSGK IPPEIGDCSN LTVLGLAETS VSGNLPSSLG NLKKLQTLSI YTTMISGEIP PELGNCSELV DIFLYENSLS GSIPREISKL AKLEQLFLWQ
0301: NSLVGGIPED IGNCSNLKMI DLSLNLLSGS IPVSIGRLSF LEEFMISDNN FSGSIPTTIS NCSSLVQLQL DKNQISGLIP TELGTLTKLT LFFAWSNQLE
0401: GSIPPGLADC TDLQALDLSR NALTGTIPSG LFMLRNLTKL LLISNSLSGS IPQEIGNCSS LVRLRLGFNR ITGEIPSGVG SLKKLNFLDL SSNRLHGKVP
0501: DEIGSCSELQ MIDLSNNSLQ GSLPNAVSSL SGLQVLDVSA NQLSGKIPAS LGRLVSLNKL ILGKNLFSGS IPGSLGMCSG LQLLDLGSNE LSGEIPSELG
0601: DIENLEIALN LSSNRLSGKI PSKFASLNKL SILDISHNLL EGDLAPLANI ENLVSLNISY NSFSGYLPDN KLFRQLPPQD LEGNKKLCST STKDSCFLAY
0701: GNSNGLADDK ETSRARNLRL ALALLISLTV VLMILGAVAV IRARRNNERE RDSELGESYK WQFTPFQKLN FSVDQIIRCL VEPNVIGKGC SGVVYRADVD
0801: NGDVIAVKKL WPAMVNGGND EKPDKNVRDS FSAEVKTLGT IRHKNIVRFL GCCWNRNTRL LMYDYMPNGS LGSLLHERRG SALDWDLRYR ILLGAAQGLA
0901: YLHHDCLPPI VHRDIKANNI LIGLDFEPYI ADFGLAKLVD EGDIGRCSNT VAGSYGYIAP EYGYSMKITE KSDVYSYGVV VLEVLTGKQP IDPTVPEGLH
1001: LVDWVRQNRG SLEVLDSSLR SRTEAEADEM MQVLGTALLC VNASPDERPT MKDVAAMLKE IKQEREEYAK VDLLLKKSPP PTAKTQEEGS KNEMTVAVAS
1101: SSKEMRREER IVKSNNTSFS ASSLLYSPTS SIE

Best Arabidopsis Sequence Match ( AT3G24240.1 )
(BLAST)

0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E

Arabidopsis Description

RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.