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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89518 Canola cytosol 1.32 100.0
CDY37560 Canola plasma membrane 97.58 91.16
Bra008505.1-P Field mustard plasma membrane 97.47 81.36
AT5G63930.1 Thale cress plasma membrane 86.36 71.23
VIT_05s0051g00460.t01 Wine grape plasma membrane 63.04 51.86
GSMUA_Achr1P03380_001 Banana plasma membrane 42.35 51.13
GSMUA_Achr4P25040_001 Banana plasma membrane 49.95 50.0
Solyc12g098100.1.1 Tomato plasma membrane 60.29 49.95
KRH33496 Soybean plasma membrane 61.17 49.73
KRG90257 Soybean plasma membrane 60.95 49.73
PGSC0003DMT400043459 Potato plasma membrane 59.96 49.68
Solyc09g091260.2.1 Tomato plasma membrane 60.07 49.28
TraesCS2B01G379400.1 Wheat plasma membrane 59.74 49.1
KXG26669 Sorghum plasma membrane 59.3 49.04
TraesCS2A01G360300.1 Wheat plasma membrane 59.63 49.01
PGSC0003DMT400030278 Potato plasma membrane 59.63 48.92
CDY23764 Canola plasma membrane 57.21 48.83
Zm00001d003101_P007 Maize plasma membrane 58.64 48.59
CDY37749 Canola plasma membrane 47.19 46.08
Os04t0506100-01 Rice cytosol 7.92 44.44
CDY26259 Canola plastid 50.16 42.26
CDY48481 Canola plasma membrane 51.27 42.06
GSMUA_Achr8P12800_001 Banana plasma membrane 39.05 40.34
CDY28619 Canola plasma membrane 37.07 31.61
CDY17379 Canola plasma membrane 37.29 31.19
CDY28391 Canola plasma membrane 35.97 30.53
CDX73290 Canola plasma membrane 36.52 30.24
CDY65166 Canola plasma membrane 34.1 30.18
CDX93999 Canola cytosol, nucleus, plasma membrane 27.94 30.09
CDX98665 Canola cytosol, nucleus, plasma membrane 27.94 30.09
CDY35204 Canola plasma membrane 33.22 30.05
CDX97498 Canola plasma membrane 33.66 29.97
CDY66353 Canola plasma membrane 28.16 29.8
CDY59496 Canola plasma membrane 33.33 29.71
CDY11130 Canola plasma membrane 33.77 29.69
CDY31136 Canola plasma membrane 33.22 29.61
CDX68246 Canola plasma membrane 35.86 29.56
CDY02112 Canola plasma membrane 31.46 29.52
CDY31445 Canola cytosol, plasma membrane, plastid 27.39 29.5
CDX89328 Canola cytosol 29.92 29.5
CDX94319 Canola cytosol 29.92 29.5
CDX73202 Canola plasma membrane 32.01 29.48
CDY54567 Canola cytosol, plasma membrane, plastid 27.28 29.38
CDY23037 Canola plasma membrane 31.24 29.37
CDY08759 Canola plasma membrane 31.35 29.35
CDX87661 Canola plasma membrane 31.13 29.33
CDY45620 Canola plasma membrane 31.35 29.29
CDY38373 Canola plasma membrane 30.8 29.11
CDX73169 Canola plasma membrane 28.27 28.72
CDX77472 Canola plasma membrane 34.65 27.8
CDY62258 Canola plasma membrane 26.62 27.78
CDX85146 Canola plasma membrane 33.55 27.63
CDY23065 Canola plasma membrane 30.47 27.26
CDY02141 Canola plasma membrane 26.51 27.05
CDY19929 Canola cytosol 24.09 26.23
CDX96976 Canola plasma membrane 35.86 26.23
CDY14942 Canola plasma membrane 35.86 26.23
CDY56672 Canola cytosol 23.65 25.78
CDX72170 Canola plasma membrane 23.87 24.38
CDY27242 Canola plasma membrane 23.65 24.0
CDY06535 Canola plasma membrane 35.09 20.25
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7GO:A0A078JNI2UniProt:A0A078JNI2
EnsemblPlants:CDY68314ProteinID:CDY68314ProteinID:CDY68314.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00072821001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00069PFAM:PF08263PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF434
InterPro:Prot_kinase_domSMART:SM00369SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EDE2D4SEG:seg:::
Description
BnaCnng58470DBnaCnng58470D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JNI2]
Coordinates
chrLK037156:+:2804..6292
Molecular Weight (calculated)
98873.5 Da
IEP (calculated)
8.098
GRAVY (calculated)
0.093
Length
909 amino acids
Sequence
(BLAST)
001: MMRKTTVFAM CILLPLTLWI SETRGLNLEG QYLLDIKSKF VDDSQNLKNW NSNDSVPCGW TGVRCSNYSN QEVLSLNLSS MALSGNLSPS IGRLVHLKDL
101: DLSYNGLSGN IPKEIGNCLS LVNLRLNNNM FGGEVPVEIG KLSSLEKLII YNNRFTGSLP MEIGNLLSLT QLVTYSNNIS GSLPRSIGKL KKLTSFRAGQ
201: NMISGSLPSE IGGCESLVML GLAQNQLSGE IPKEIGMLKK LSQVILWENQ LSGLIPNEIT NCTSLQTLAL YKNQLVGPIP KGLGNLASLE YLYLYRNMLN
301: GTIPREIGNL SSAVEIDFSE NGLTGEIPLE FGNIQGLELL YLFENQLVGT IPVELTSLKN LTKLDLSINA LTGPIPLGFQ YLRKLFMLQL FQNSLSGIIP
401: PKLGVYSNLW VLDLSDNHLR GRIPSYLCLH SNMIILNLGA NNLSGNIPTS ITTCKTLVQL RLAGNSLVGR FPSNLCKLVN LTAIELGQNK FRGSIPREVG
501: NCRALQRLQL ADNAFTGELP REIGTLRELG TLNLSSNKLT GEIPSEIFKC KMLQRLDMCC NNFSGTLASD VGSLYQLELL KLSNNKLSGA IPLALGNLSR
601: LTELQMGGNL FYGSIPREFG SLTGLQIALN LSFNKLTGEI PSQLSNVVML ELLLLNNNDL SGEIPSSFAN LSSLFGYNFS YNNLTGPIPL LRNMSISSFI
701: GNKGLCGPPL DQCIQTQPSS PSQSTAKRRG IRTSKIIAIT AAAIGGVSLA LIVLIVYLIR RPMTTTVATS IQEDGKSSET SLDIYFPPKE GFTFQDLVAA
801: TDNFDESFVI GRGACGTVYK AVLPAAHVGD FGLAKVIDMP HSKSMSAIAG SYGYIAPEYA YTMKVTEKSD IYSYGVVLLE LLTGKAPVQP IDQGGDVVSW
901: VRSYIRRDA
Best Arabidopsis Sequence Match ( AT5G63930.1 )
(BLAST)
0001: MVKEMMKLAV FFISLLLILL ISETTGLNLE GQYLLEIKSK FVDAKQNLRN WNSNDSVPCG WTGVMCSNYS SDPEVLSLNL SSMVLSGKLS PSIGGLVHLK
0101: QLDLSYNGLS GKIPKEIGNC SSLEILKLNN NQFDGEIPVE IGKLVSLENL IIYNNRISGS LPVEIGNLLS LSQLVTYSNN ISGQLPRSIG NLKRLTSFRA
0201: GQNMISGSLP SEIGGCESLV MLGLAQNQLS GELPKEIGML KKLSQVILWE NEFSGFIPRE ISNCTSLETL ALYKNQLVGP IPKELGDLQS LEFLYLYRNG
0301: LNGTIPREIG NLSYAIEIDF SENALTGEIP LELGNIEGLE LLYLFENQLT GTIPVELSTL KNLSKLDLSI NALTGPIPLG FQYLRGLFML QLFQNSLSGT
0401: IPPKLGWYSD LWVLDMSDNH LSGRIPSYLC LHSNMIILNL GTNNLSGNIP TGITTCKTLV QLRLARNNLV GRFPSNLCKQ VNVTAIELGQ NRFRGSIPRE
0501: VGNCSALQRL QLADNGFTGE LPREIGMLSQ LGTLNISSNK LTGEVPSEIF NCKMLQRLDM CCNNFSGTLP SEVGSLYQLE LLKLSNNNLS GTIPVALGNL
0601: SRLTELQMGG NLFNGSIPRE LGSLTGLQIA LNLSYNKLTG EIPPELSNLV MLEFLLLNNN NLSGEIPSSF ANLSSLLGYN FSYNSLTGPI PLLRNISMSS
0701: FIGNEGLCGP PLNQCIQTQP FAPSQSTGKP GGMRSSKIIA ITAAVIGGVS LMLIALIVYL MRRPVRTVAS SAQDGQPSEM SLDIYFPPKE GFTFQDLVAA
0801: TDNFDESFVV GRGACGTVYK AVLPAGYTLA VKKLASNHEG GNNNNVDNSF RAEILTLGNI RHRNIVKLHG FCNHQGSNLL LYEYMPKGSL GEILHDPSCN
0901: LDWSKRFKIA LGAAQGLAYL HHDCKPRIFH RDIKSNNILL DDKFEAHVGD FGLAKVIDMP HSKSMSAIAG SYGYIAPEYA YTMKVTEKSD IYSYGVVLLE
1001: LLTGKAPVQP IDQGGDVVNW VRSYIRRDAL SSGVLDARLT LEDERIVSHM LTVLKIALLC TSVSPVARPS MRQVVLMLIE SERSEGEQEH LDTEELTQTT
1101: TP
Arabidopsis Description
Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UJL1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.