CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56672	Canola	cytosol	97.6	97.72
Bra036154.1-P	Field mustard	plasma membrane	99.16	73.47
AT5G48940.1	Thale cress	plasma membrane	90.06	66.26
VIT_07s0005g05420.t01	Wine grape	plasma membrane	67.07	57.32
PGSC0003DMT400040886	Potato	plasma membrane	68.86	50.93
Solyc09g061940.1.1	Tomato	plasma membrane	68.74	50.89
GSMUA_Achr8P12880_001	Banana	plasma membrane	40.48	48.49
KRG99860	Soybean	plasma membrane	66.47	48.34
KRH46804	Soybean	plasma membrane	66.71	48.31
CDX77472	Canola	plasma membrane	63.59	46.87
CDX85146	Canola	plasma membrane	61.2	46.29
Os04t0132500-01	Rice	plasma membrane	61.2	44.55
GSMUA_Achr11P...	Banana	plasma membrane	38.56	44.48
Zm00001d025002_P001	Maize	plasma membrane	61.2	44.09
EES10396	Sorghum	plasma membrane	61.32	43.69
TraesCS2D01G013700.1	Wheat	plasma membrane	60.24	43.47
TraesCS2A01G012900.1	Wheat	plasma membrane	60.48	43.27
TraesCS2B01G005000.1	Wheat	plasma membrane	60.36	43.26
CDX94319	Canola	cytosol	47.19	42.73
CDX89328	Canola	cytosol	46.71	42.3
TraesCS4D01G005000.1	Wheat	plasma membrane	54.25	42.3
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	49.46	41.18
TraesCSU01G061100.1	Wheat	plastid	49.58	38.95
CDY17379	Canola	plasma membrane	46.95	36.06
CDY28619	Canola	plasma membrane	45.99	36.02
TraesCS3D01G534900.1	Wheat	plasma membrane	43.11	35.61
CDY28391	Canola	plasma membrane	44.91	35.01
CDX98665	Canola	cytosol, nucleus, plasma membrane	35.09	34.72
CDX93999	Canola	cytosol, nucleus, plasma membrane	34.97	34.6
CDX73290	Canola	plasma membrane	44.91	34.15
CDY54567	Canola	cytosol, plasma membrane, plastid	34.37	34.0
CDX89518	Canola	cytosol	0.48	33.33
CDY31445	Canola	cytosol, plasma membrane, plastid	33.65	33.29
CDY23037	Canola	plasma membrane	34.01	29.37
CDY02112	Canola	plasma membrane	34.01	29.31
CDY35204	Canola	plasma membrane	35.21	29.25
CDY08759	Canola	plasma membrane	33.77	29.04
CDY45620	Canola	plasma membrane	33.77	28.98
CDY37749	Canola	plasma membrane	32.22	28.89
CDY62258	Canola	plasma membrane	29.82	28.59
CDY23764	Canola	plasma membrane	36.17	28.36
CDY38373	Canola	plasma membrane	32.57	28.27
CDY26259	Canola	plastid	36.29	28.08
CDY66353	Canola	plasma membrane	28.86	28.06
CDY23065	Canola	plasma membrane	33.89	27.85
CDY31136	Canola	plasma membrane	34.01	27.84
CDX97498	Canola	plasma membrane	34.01	27.82
CDY65166	Canola	plasma membrane	33.77	27.46
CDY48481	Canola	plasma membrane	36.17	27.26
CDY02141	Canola	plasma membrane	28.62	26.82
CDX87661	Canola	plasma membrane	30.78	26.63
CDX73202	Canola	plasma membrane	31.38	26.55
CDY59496	Canola	plasma membrane	31.98	26.18
CDX68246	Canola	plasma membrane	33.53	25.39
CDY11130	Canola	plasma membrane	31.26	25.24
CDX73169	Canola	plasma membrane	25.87	24.13
CDY68314	Canola	plasma membrane	26.23	24.09
CDY37560	Canola	plasma membrane	28.02	24.05
CDY14942	Canola	plasma membrane	35.57	23.89
CDX96976	Canola	plasma membrane	35.45	23.81
CDX72170	Canola	plasma membrane	23.71	22.25
CDY06535	Canola	plasma membrane	41.8	22.16
CDY27242	Canola	plasma membrane	23.59	21.99

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078G3D5
UniProt:A0A078G3D5	EnsemblPlants:CDY19929	ProteinID:CDY19929	ProteinID:CDY19929.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00009731001	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00069	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EE2AB6	SEG:seg	:	:	:	:

Description

BnaA09g03220DBnaA09g03220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3D5]

Coordinates

chrLK032102:-:5356..8553

Molecular Weight (calculated)

90833.5 Da

IEP (calculated)

5.451

GRAVY (calculated)

-0.025

Length

835 amino acids

Sequence
(BLAST)

001: MLSGEIPKEL GNCSQLINLF LYDNDLSGTL PRELGTIPKS FGNLSNLQEL MLSSNNITGS IPSVLSNCSR LVQLQIDANQ ISGLIPPEIG LLKELNIFLG
101: WQNKLEGNIP TELAGCQNLQ ALDLSQNLLT GALPPGLFQL RNLTKLLLIS NSISGVIPPE IGSCTSLVRL RLVNNKITGE IPKEIGLLEN LSFLDLSENS
201: LSGPVPWEIS NCRQLQMLNL SNNTLRGSLP LSLSSLTKLQ VLDVSSNDLT GKLPDSLGQL LSLNRLILSK NSFSGEIPPS LGHCMNLQLL DLSSNNISGA
301: IPEELFDIQD LDIALNLSWN SLVGFIPARI SALNRLSVLD ISHNMLSGDL FALSGLENLV SLNISHNRFS GYLPDSKVFR QIVAEEMEGN SGLCSKGLRS
401: CFVSNSTLLN TQHGGDFAHS QRLKIAIGLL ISVTIVLAVL GVLAVLRARQ MIQDGNDSEK GENLWTWQFT PFQKLNFTVE HVLKCLVEGN VIGKGCSGVV
501: YRAEMPNQEV IAVKKLWPVT VTVAKTSGGR DSFSAEVKTL GSIRHKNIVR FLGCCWNKNT RLLMYDYMSN GSLGSLLHER SGECSLGWEV RYKIILGAAQ
601: GLAYLHHDCV PPIVHRDIKA NNILIGPDFE PYIGDFGLAK LVDDGDFARS SKTIAGSYGY IAPEYGYSMK ITEKSDVYSY GVVVLEVLTG KEPIDPTIPD
701: GLHIVDWVKK IRDIQVIDQG LQARPESEVE EVMQTLGVAL LCVNPIPEDR PTMKDVAAML SEIRQEREEP MKGGGNNGCS GSCNNNGGEG RDESLSSSAM
801: QQTAKYLRSS STSFSASSLL YSSSSSTSNA RPNLK

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.