Factsheet for PGSC0003DMT400040886

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g061940.1.1	Tomato	plasma membrane	96.28	96.37
VIT_07s0005g05420.t01	Wine grape	plasma membrane	62.89	72.67
CDY56672	Canola	cytosol	50.93	68.94
CDY19929	Canola	cytosol	50.93	68.86
KRG99860	Soybean	plasma membrane	68.47	67.33
KRH46804	Soybean	plasma membrane	68.47	67.04
Bra036154.1-P	Field mustard	plasma membrane	66.61	66.73
AT5G48940.1	Thale cress	plasma membrane	66.87	66.52
PGSC0003DMT400076247	Potato	cytosol	9.48	61.85
PGSC0003DMT400076250	Potato	plasma membrane	66.61	61.14
GSMUA_Achr8P12880_001	Banana	plasma membrane	36.85	59.68
Os04t0132500-01	Rice	plasma membrane	58.46	57.54
TraesCS2A01G012900.1	Wheat	plasma membrane	58.46	56.56
TraesCS2D01G013700.1	Wheat	plasma membrane	57.84	56.44
TraesCS2B01G005000.1	Wheat	plasma membrane	58.19	56.39
Zm00001d025002_P001	Maize	plasma membrane	57.75	56.26
EES10396	Sorghum	plasma membrane	57.93	55.8
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	49.07	55.23
GSMUA_Achr11P...	Banana	plasma membrane	35.16	54.83
TraesCS4D01G005000.1	Wheat	plasma membrane	50.58	53.31
PGSC0003DMT400063787	Potato	plasma membrane, plastid	48.1	51.57
TraesCSU01G061100.1	Wheat	plastid	46.86	49.76
PGSC0003DMT400046807	Potato	plasma membrane	46.59	47.52
PGSC0003DMT400057334	Potato	plasma membrane	45.08	47.0
PGSC0003DMT400064535	Potato	plasma membrane	44.55	46.23
TraesCS3D01G534900.1	Wheat	plasma membrane	40.66	45.4
PGSC0003DMT400059664	Potato	plasma membrane	43.14	45.18
PGSC0003DMT400043020	Potato	plasma membrane	34.37	37.96
PGSC0003DMT400043459	Potato	plasma membrane	36.76	37.83
PGSC0003DMT400010618	Potato	plasma membrane	33.66	37.55
PGSC0003DMT400079864	Potato	plasma membrane	36.76	37.42
PGSC0003DMT400078706	Potato	plasma membrane	33.3	36.97
PGSC0003DMT400064038	Potato	plasma membrane	32.6	36.84
PGSC0003DMT400030278	Potato	plasma membrane	35.96	36.64
PGSC0003DMT400025747	Potato	plasma membrane	31.8	36.56
PGSC0003DMT400048524	Potato	plasma membrane	32.86	36.55
PGSC0003DMT400016060	Potato	plasma membrane	30.91	36.35
PGSC0003DMT400022119	Potato	plasma membrane	33.04	36.28
PGSC0003DMT400018675	Potato	plasma membrane	32.6	36.15
PGSC0003DMT400023681	Potato	plasma membrane	31.53	32.25
PGSC0003DMT400030886	Potato	plasma membrane	26.57	31.28
PGSC0003DMT400008336	Potato	plasma membrane	30.03	30.4
PGSC0003DMT400008335	Potato	plasma membrane	30.29	30.35
PGSC0003DMT400059346	Potato	plasma membrane	33.22	29.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1BAL3	PFAM:PF07714
PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400015814	PGSC:PGSC0003DMG400015814	EnsemblPlants:PGSC0003DMT400040886	PRINTS:PR00019	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294B7AC	SEG:seg

Description

Receptor protein kinase CLAVATA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015814]

Coordinates

chr9:+:45245059..45248540

Molecular Weight (calculated)

122842.0 Da

IEP (calculated)

4.933

GRAVY (calculated)

0.021

Length

1129 amino acids

Sequence
(BLAST)

0001: MPMSRRFLDL PNLVVFLTFF LLLHNFALPS NEVDVLFSWL HSTNSPIPQT FSNWNPSDST PCKWSHIVCS SNLFVTQIDI QFIQLALPFP SNLSSLQSLQ
0101: KLIISGANLT GTIPQDIGDC VSLVTLDVSS NGLVGTIPKT IGNLINLEDL ILNSNQLTGE IPGEVGSCIN LKNLIIFDNM FSGNLPSELG KLGVLENIRA
0201: GGNKDISGKI PDELGNCKNL IVLGLADTKI SGSLPPSLGN LGKLQVLSIY TTMLSGKIPS EIGNCSELVD LYLYQNSLSG SLPAELGKLQ KVEKMLFWQN
0301: NLDGLIPDEI GNCKSLVILD LSLNFLSGSI PWSFGNLTNL QELMISNNNI SGSIPSVLSN ATNLLQFQMD TNQISGSIPL EMGQLKELNI FFAWQNKLEG
0401: SIPPALGGCR SLQALDLSHN SLTGSLPPDL FQLTNLTKLL LISNDISGFI PPEIGNCSSL IRIRLIGNKL SGQIPREIGF LDNLSFLDLS ENHLTGSVPE
0501: EIGNCKTLQM LNLSNNTLSG NLPSSLSSLS RLEILDVSLN QFNGQIPASY GQLANLNRLV LSKNAFSGSI PPTLGNCSSL QLLDLSSNEF SGNMPVELFD
0601: IQTLDIALNL SWNILSGVVP PQISALNKLS VLDLSHNKLE GDLLSLSGLE NLVSLNVSYN NFTGYLPDNK LFRQLSSAEM AGNKGLCSLG HDSCFLSNVE
0701: GGGMMSNSNV RRSWRLKLAI ALLSVVTIAL ALLGMLAVYR VRKMSREDND SELGGGDSSA WKFTPFQKLN FSVEQILRCL VESNVIGKGC SGVVYRAELE
0801: NGEAIAVKKL WPTTLATGYN CQNSKSGISG CVRDSFSTEI KTLGSIRHKN IVKFLGCCWN QNTRLLMYDY MPNGSLGSLL HERSDGCLEW ELRYKIVLGA
0901: AQGLAYLHHD CTPPIVHRDI KANNILIGLD FEPYIADFGI AKLVDDGDFA RSSNTVAGSY GYIAPEYGYM MKITEKSDVY SFGVVVLEVL TGKQPIDPTI
1001: PDGVHIVDWV RQKRGSDEVL DVSLCARPES EVDEMMQTIG VAMLCVNPSP DDRPTMKDVA AMLKEIRLER EEYQKVDMLL KDGGDNKSSS DGGPSSKMHS
1101: LYLQSNNTSF SASSLLHSSS SNTKNIGFK

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.