Factsheet for PGSC0003DMT400059664

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g056730.1.1	Tomato	plasma membrane, vacuole	96.38	96.47
PGSC0003DMT400064535	Potato	plasma membrane	83.49	82.72
VIT_18s0001g02590.t01	Wine grape	plastid	70.22	80.79
KRH35050	Soybean	plasma membrane	77.27	77.06
KRG91721	Soybean	plasma membrane	76.81	76.74
AT1G34110.1	Thale cress	extracellular, plasma membrane	72.63	73.04
GSMUA_Achr2P15820_001	Banana	plasma membrane	58.53	72.78
Bra034446.1-P	Field mustard	plasma membrane	71.71	70.59
CDX73290	Canola	plasma membrane	71.8	70.49
CDY28391	Canola	plasma membrane	69.94	70.4
TraesCS7B01G260400.1	Wheat	plasma membrane	68.83	69.41
TraesCS7D01G354700.1	Wheat	plasma membrane	68.74	69.32
TraesCS7A01G368200.1	Wheat	plasma membrane	68.37	68.94
EER89985	Sorghum	plasma membrane	68.65	68.77
Os06t0589800-01	Rice	extracellular	68.37	68.75
Zm00001d046485_P001	Maize	plasma membrane	67.72	67.66
HORVU7Hr1G085600.1	Barley	plasma membrane	67.35	67.47
GSMUA_Achr10P...	Banana	plastid	45.08	64.8
PGSC0003DMT400063787	Potato	plasma membrane, plastid	44.34	45.39
PGSC0003DMT400040886	Potato	plasma membrane	45.18	43.14
PGSC0003DMT400057334	Potato	plasma membrane	41.93	41.74
PGSC0003DMT400046807	Potato	plasma membrane	42.02	40.92
PGSC0003DMT400076250	Potato	plasma membrane	44.71	39.19
PGSC0003DMT400079864	Potato	plasma membrane	38.96	37.87
PGSC0003DMT400016060	Potato	plasma membrane	33.3	37.4
PGSC0003DMT400043020	Potato	plasma membrane	35.34	37.28
PGSC0003DMT400043459	Potato	plasma membrane	37.85	37.19
PGSC0003DMT400064038	Potato	plasma membrane	34.32	37.04
PGSC0003DMT400025747	Potato	plasma membrane	33.67	36.97
PGSC0003DMT400078706	Potato	plasma membrane	34.69	36.77
PGSC0003DMT400030278	Potato	plasma membrane	37.66	36.64
PGSC0003DMT400018675	Potato	plasma membrane	34.14	36.15
PGSC0003DMT400010618	Potato	plasma membrane	33.58	35.77
PGSC0003DMT400022119	Potato	plasma membrane	32.93	34.53
PGSC0003DMT400048524	Potato	plasma membrane	32.47	34.48
PGSC0003DMT400023681	Potato	plasma membrane	34.97	34.15
PGSC0003DMT400076247	Potato	cytosol	5.19	32.37
PGSC0003DMT400008336	Potato	plasma membrane	33.12	32.02
PGSC0003DMT400030886	Potato	plasma membrane	28.39	31.91
PGSC0003DMT400008335	Potato	plasma membrane	33.12	31.68
PGSC0003DMT400059346	Potato	plasma membrane	35.71	30.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1C4J9	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400023192	PGSC:PGSC0003DMG400023192	EnsemblPlants:PGSC0003DMT400059664	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF33	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296E729	SEG:seg	:

Description

Leucine-rich repeat receptor protein kinase EXS [Source:PGSC_GENE;Acc:PGSC0003DMG400023192]

Coordinates

chr12:+:54849651..54853316

Molecular Weight (calculated)

117824.0 Da

IEP (calculated)

5.870

GRAVY (calculated)

0.104

Length

1078 amino acids

Sequence
(BLAST)

0001: MTTLSYFFII FFFLLSCLSP RRVNSLSSDG KALLSLLKAT YDPYAKSSSS FVLSSWNAST STPCSWQGIS CSPQQRVISV SIPNTFLNLS SFPFELFSLS
0101: SLQLLNLSST NISGSIPSSF GLFTHLRLLD LSSNSLSGHV PSELGGLTSL QFLFLNSNRL SGRIPYQLAN LSSLEILCLQ DNLLNGSIPK YLGSLVSLQQ
0201: FRIGGNLELS GEIPAELGML TNLTTFGVAA TGLSGVIPHT FGNLISLQTL AVYDTEVFGS IPPELGMCSE LRNLYLHMNK LTGPIPRQLG KLQKITSLLL
0301: WGNSLTGPVP AELSNCSSLV VLDVSANDLS GEIPGDLGKL EVLEQLHLSD NALSGAIPMQ LSNCSSLTAL QLDKNLLSGT IPEQVGELKY LQIFLLWGNS
0401: VSGTIPAAFG NCTELYSLDL SRNNLTGSIP EEIFSLKKLS RLLLLGNSLT GRLSPSVAKC QSLVRLRIGE NQFSGPIPDE IGQLQNLVFL DLYMNHFSGE
0501: LPSEIANITV LELLDVHNNY LTGEIPSSLG ELVNLEQLDL SKNSFTGEIP WSFGNLSYLN KLILSNNLLT GPIPKSFSNL QKLTLLDLSS NSLSGAISPE
0601: IGYMTSLTIS LDLSSNRFTG ELPDTLSGLT LLQSLDISHN MLSGRITTLS LLTSLATLNV SYNNFSGPIP VTPSFRTLTS NSFLENSLLC ESTDGFTCSA
0701: HITRRNGLKS AKTIALAAVI VTSASITVVA TWYLVTRKHR YEFEKSPGMS VSAIGTEDFS YPWTFIPFQK LNCTVDNILD CLKDENIIGK GCSGVVYRAE
0801: MPNGELIAVK KLWKTKKDEE PIDSFAAEIQ ILGHIRHRNI VKLLGYCSNR SVKLLLYNYI SNGNLQQLLQ SNRNLDWEIR YKIAVGSAQG LAYLHHDCVP
0901: AILHRDIKCN NILLDSKFEA YLADFGLAKL MNSPNYHQAM SRVAGSYGYI APEYGYTVNI TEKSDVYSYG VVLLEILSGR SAIEPQIGDG QHIVEWVKKK
1001: MGSFEPAVTI LDLKLQSLPD QMVQEMLQTL GIAMFCVNSS PTERPTMKEV VTLLMEVKSP TEEFGKTSQP LINQSTQS

Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)

0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.