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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046485_P001 Maize plasma membrane 96.0 95.74
Os06t0589800-01 Rice extracellular 88.85 89.18
TraesCS7D01G354700.1 Wheat plasma membrane 88.2 88.77
TraesCS7B01G260400.1 Wheat plasma membrane 87.92 88.49
TraesCS7A01G368200.1 Wheat plasma membrane 87.45 88.03
HORVU7Hr1G085600.1 Barley plasma membrane 86.43 86.43
GSMUA_Achr2P15820_001 Banana plasma membrane 58.27 72.32
VIT_18s0001g02590.t01 Wine grape plastid 62.17 71.4
KRH35050 Soybean plasma membrane 70.54 70.21
KRG91721 Soybean plasma membrane 69.33 69.14
PGSC0003DMT400059664 Potato plasma membrane 68.77 68.65
Solyc12g056730.1.1 Tomato plasma membrane, vacuole 68.49 68.43
PGSC0003DMT400064535 Potato plasma membrane 69.14 68.38
AT1G34110.1 Thale cress extracellular, plasma membrane 66.73 66.98
GSMUA_Achr10P... Banana plastid 46.19 66.27
CDX73290 Canola plasma membrane 66.26 64.94
Bra034446.1-P Field mustard plasma membrane 65.8 64.66
CDY28391 Canola plasma membrane 64.22 64.52
EES15451 Sorghum plasma membrane 45.17 44.22
EES10396 Sorghum plasma membrane 46.19 42.41
KXG35861 Sorghum plastid 44.05 41.76
EES17789 Sorghum plasma membrane 43.49 41.42
EER97948 Sorghum plasma membrane 37.55 39.19
EER93376 Sorghum plasma membrane 37.17 38.84
KXG39823 Sorghum plasma membrane 35.69 38.36
KXG34410 Sorghum plasma membrane 39.59 38.24
KXG26669 Sorghum plasma membrane 38.29 37.49
KXG20897 Sorghum plasma membrane 34.01 36.6
EES02390 Sorghum plasma membrane, plastid 43.87 35.95
EES13340 Sorghum plastid 34.57 35.6
EES20075 Sorghum plasma membrane 34.67 35.52
EES06133 Sorghum plasma membrane 34.39 35.51
EER92863 Sorghum plasma membrane 34.11 35.32
OQU83191 Sorghum plasma membrane 33.74 33.8
OQU80948 Sorghum plasma membrane, plastid 32.9 33.24
EER97238 Sorghum plasma membrane 38.1 32.62
KXG25252 Sorghum mitochondrion, plasma membrane 33.83 31.41
KXG38677 Sorghum plasma membrane 32.25 31.29
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.8.2MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8079326
UniProt:C5Z570EnsemblPlants:EER89985ProteinID:EER89985ProteinID:EER89985.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263PFAM:PF13516PFAM:PF13855
PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF33
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3010G177300SUPFAM:SSF52047
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0001A89917
RefSeq:XP_002438618.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:51512878..51517492
Molecular Weight (calculated)
114694.0 Da
IEP (calculated)
7.124
GRAVY (calculated)
0.162
Length
1076 amino acids
Sequence
(BLAST)
0001: MAHHRRRARL FSVVAAAAAL LVLSVGTAAA LSPDGKALLS LLPGAAPSPV LPSWDPKAAT PCSWQGVTCS PQSRVVSLSL PNTFLNLSSL PPPLATLSSL
0101: QLLNLSTCNI SGTVPPSYAS LSALRVLDLS SNALTGDIPD ELGALSGLQF LLLNSNRLTG GIPRSLANLS ALQVLCVQDN LLNGTIPASL GALAALQQFR
0201: VGGNPELSGP IPASLGALSN LTVFGAAATA LSGPIPEELG SLVNLQTLAL YDTSVSGSIP AALGGCVELR NLYLHMNKLT GPIPPELGRL QKLTSLLLWG
0301: NALSGKIPPE LSSCSALVVL DLSGNRLTGE VPGALGRLGA LEQLHLSDNQ LTGRIPPELS NLSSLTALQL DKNGFSGAIP PQLGELKALQ VLFLWGNALS
0401: GAIPPSLGNC TELYALDLSK NRFSGGIPDE VFALQKLSKL LLLGNELSGP LPPSVANCVS LVRLRLGENQ LVGEIPREIG KLQNLVFLDL YSNRFTGSLP
0501: AELANITVLE LLDVHNNSFT GGIPPQFGEL MNLEQLDLSM NKLTGEIPAS FGNFSYLNKL ILSGNNLSGP LPKSIRNLQK LTMLDLSNNS FSGPIPPEIG
0601: ALSSLGISLD LSSNRFVGEL PDEMSGLTQL QSLNLASNGL YGSISVLGEL TSLTSLNISY NNFSGAIPVT PFFRTLSSNS YLGNANLCES YDGHSCAADM
0701: VRRSALKTVK TVILVCGVLG SIALLLVVVW ILINRSRKLA SQKAMSLSGA GGDDFSNPWT FTPFQKLNFS IDNILACLRD ENVIGKGCSG VVYRAEMPNG
0801: DIIAVKKLWK AGKDEPIDAF AAEIQILGHI RHRNIVKLLG YCSNRSVKLL LYNYIPNGNL LQLLKENRSL DWDTRYKIAV GTAQGLAYLH HDCVPAILHR
0901: DVKCNNILLD SKYEAYLADF GLAKLMNSPN YHHAMSRIAG SYGYIAPEYA YTSNITEKSD VYSYGVVLLE ILSGRSAIEP VVGETSLHIV EWAKKKMGSY
1001: EPAVNILDPK LRGMPDQLVQ EMLQTLGVAI FCVNAAPAER PTMKEVVALL KEVKTPPEEW AKTSQQPLIK PGSQQG
Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)
0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.