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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018807_P001 Maize plasma membrane 93.81 94.57
Os07t0152200-01 Rice plasma membrane 81.42 81.79
TraesCS2A01G251000.1 Wheat plasma membrane 80.7 81.58
TraesCS2D01G252000.1 Wheat plasma membrane 80.7 81.5
TraesCS2B01G265700.1 Wheat plasma membrane 80.25 80.91
HORVU2Hr1G060110.2 Barley plasma membrane 79.71 80.58
GSMUA_Achr4P28370_001 Banana plasma membrane 54.85 69.43
VIT_19s0027g00010.t01 Wine grape plasma membrane 60.32 60.49
KRH13628 Soybean plasma membrane 58.62 58.41
KRH43841 Soybean plasma membrane 58.53 58.21
CDY26259 Canola plastid 56.1 57.92
Solyc07g056410.2.1 Tomato plasma membrane 57.09 57.35
PGSC0003DMT400079864 Potato plasma membrane 56.91 57.17
Bra025988.1-P Field mustard plasma membrane 56.55 56.76
CDY48481 Canola plasma membrane 56.01 56.32
AT1G17230.2 Thale cress plasma membrane 56.46 55.52
KXG26669 Sorghum plasma membrane 51.26 51.96
EER89985 Sorghum plasma membrane 38.24 39.59
EER97948 Sorghum plasma membrane 36.09 38.99
KXG20897 Sorghum plasma membrane 34.65 38.6
EER93376 Sorghum plasma membrane 35.19 38.06
KXG39823 Sorghum plasma membrane 33.84 37.66
OQU80948 Sorghum plasma membrane, plastid 34.83 36.43
EES17789 Sorghum plasma membrane 36.62 36.11
EES15451 Sorghum plasma membrane 35.55 36.03
EES10396 Sorghum plasma membrane 37.79 35.92
OQU83191 Sorghum plasma membrane 34.29 35.57
KXG35861 Sorghum plastid 36.18 35.51
EES20075 Sorghum plasma membrane 33.3 35.33
EER92863 Sorghum plasma membrane 32.94 35.32
EES06133 Sorghum plasma membrane 32.85 35.12
EES13340 Sorghum plastid 32.67 34.83
KXG38677 Sorghum plasma membrane 34.38 34.54
KXG25252 Sorghum mitochondrion, plasma membrane 34.56 33.22
EER97238 Sorghum plasma membrane 36.27 32.14
EES02390 Sorghum plasma membrane, plastid 37.16 31.53
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6Q933GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG34410ProteinID:KXG34410ProteinID:KXG34410.1InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263
PFAM:PF13855ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF68
InterPro:Prot_kinase_domSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3002G035600SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081ACD72SEG:seg:
Description
hypothetical protein
Coordinates
chr2:-:3340297..3345184
Molecular Weight (calculated)
120042.0 Da
IEP (calculated)
5.831
GRAVY (calculated)
0.082
Length
1114 amino acids
Sequence
(BLAST)
0001: MRAATAAMAA GVPRFSLPAA VLLLALLNLN SAATAADVDG GAAALLQFKR ALEDVDGRLS TWGGAGAGPC GWAGIACSTA GEVTGVTLHG LNLQGGLSAA
0101: VCALPRLAVL NVSKNALKGP IPQGLAACAA LEVLDLSTNA LHGAVPPDLC ALPALRRLFL SENLLVGDIP LAIGNLTALE ELEIYSNNLT GRIPASVSAL
0201: QRLRVIRAGL NQLSGPIPVE LTECASLEVL GLAQNHLAGE LPRELSRLKN LTTLILWQNY LSGDVPPELG ECTNLQMLAL NDNSFTGGVP RELAALPSLL
0301: KLYIYRNQLD GTIPPELGNL QSVLEIDLSE NKLTGVIPAE LGRISTLRLL YLFENRLQGT IPPELGQLSS IRKIDLSINN LTGTIPMVFQ NLSGLEYLEL
0401: FDNQLQGAIP PLLGANSNLS VLDLSDNQLT GSIPPHLCKY QKLMFLSLGS NHLIGNIPQG VKTCKTLTQL RLGGNMLTGS LPVELSLLQN LTSLEMNQNR
0501: FSGPIPPEIG KFRSIERLIL SNNFFVGQMP AAIGNLTELV AFNISSNQLT GPIPSELARC KKLQRLDLSR NSLTGVIPTE IGGLGNLEQL KLSDNSLNGT
0601: IPSSFGGLSR LIELEMGGNR LSGQVPVELG ELSSLQIALN VSHNMLSGEI PTQLGNLHML QYLYLDNNEL EGQVPSSFSD LSSLLECNLS YNNLVGPLPS
0701: TPLFEHLDSS NFLGNNGLCG IKGKACPGSA SSYSSKEAAA QKKRFLREKI ISIASIVIAL VSLVLIAVVC WALRAKIPEL VSSEERKTGF SGPHYCLKER
0801: VTYQELMKAT EDFSESAVIG RGACGTVYKA VMPDGRKIAV KKLKAQGEGS NIDRSFRAEI TTLGNVRHRN IVKLYGFCSH QDSNLILYEY MANGSLGELL
0901: HGSKDAYLLD WDTRYRIALG AAEGLRYLHS DCKPQVIHRD IKSNNILLDE MMEAHVGDFG LAKLIDISNS RSMSAVAGSY GYIAPEYAFT MKVTEKCDVY
1001: SFGVVLLELL TGQSPIQPLE KGGDLVNLVR RMMNKMMPNT EVFDSRLDLS SRRVVEEMSL VLKIALFCTN ESPFDRPSMR EVISMLIDAR ASSYDSFSSP
1101: ASEAPIEYDS SPKI
Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)
0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I
Arabidopsis Description
Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.