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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d008715_P001 Maize plasma membrane 78.98 92.92
Os01t0170300-01 Rice extracellular 72.73 85.5
TraesCS3A01G092300.1 Wheat plasma membrane 70.98 84.12
TraesCS3D01G092600.1 Wheat plasma membrane 71.21 84.08
TraesCS3B01G107600.1 Wheat plasma membrane 71.13 83.92
EES17789 Sorghum plasma membrane 65.8 76.46
GSMUA_Achr3P20720_001 Banana plasma membrane 44.94 67.97
GSMUA_Achr10P... Banana plasma membrane 47.83 64.88
HORVU3Hr1G016360.2 Barley extracellular 48.51 64.74
VIT_17s0000g08900.t01 Wine grape plasma membrane 49.96 60.29
PGSC0003DMT400046807 Potato plasma membrane 48.74 57.81
KRH03251 Soybean plasma membrane 49.35 57.75
Solyc03g112580.2.1 Tomato plasma membrane 48.59 57.74
KRH57106 Soybean plasma membrane 45.62 54.26
EES15451 Sorghum plasma membrane 44.55 53.23
KXG35861 Sorghum plastid 45.85 53.04
EES10396 Sorghum plasma membrane 39.68 44.45
EER89985 Sorghum plasma membrane 35.95 43.87
EER97948 Sorghum plasma membrane 29.93 38.12
EES06133 Sorghum plasma membrane 29.86 37.62
EER93376 Sorghum plasma membrane 29.32 37.38
KXG34410 Sorghum plasma membrane 31.53 37.16
KXG26669 Sorghum plasma membrane 31.07 37.12
KXG20897 Sorghum plasma membrane 28.26 37.1
EER92863 Sorghum plasma membrane 28.71 36.28
KXG39823 Sorghum plasma membrane 27.49 36.06
EES13340 Sorghum plastid 28.48 35.79
EES20075 Sorghum plasma membrane 27.42 34.29
OQU83191 Sorghum plasma membrane 27.49 33.61
OQU80948 Sorghum plasma membrane, plastid 27.19 33.52
EER97238 Sorghum plasma membrane 30.92 32.3
KXG38677 Sorghum plasma membrane 27.04 32.01
KXG25252 Sorghum mitochondrion, plasma membrane 27.65 31.32
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.8.2MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8078485
UniProt:C5XNG1EnsemblPlants:EES02390ProteinID:EES02390ProteinID:EES02390.2GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF428
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3003G052100SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0009DC8481RefSeq:XP_002457270.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:-:4689858..4694726
Molecular Weight (calculated)
137614.0 Da
IEP (calculated)
7.465
GRAVY (calculated)
0.093
Length
1313 amino acids
Sequence
(BLAST)
0001: MSACHCQCHP QPLFSSLKTQ VLPCKVSSSS LKPKPEPEPG FCLLPPNRHI TICIASRCGL WPWQWHASAS ASSSPSTKPV VSEAWLKPRH QSTYSGLCKV
0101: AEPLSCAAAS GTSNDTDLQV TPASADPTAS PHPHLIPFLG FVVVWSPGWI CFGSESAALK YRSSVALSDW RLGSCRGGLP PGVMMSSRSR TRSRWRGACA
0201: APPPPLLLLL LLRCALVMAC MGGALAVDAQ GAALLAWKRT LRGGAEALGD WRDTDASPCR WTGVSCNAAG RVTELSLQFV DLHGGVPADL PSSAVGATLA
0301: RLVLTGTNLT GPIPPQLGDL PALAHLDLSN NALTGSIPAA LCRPGSRLES LYLNSNRLEG AIPDAIGNLT ALRELIIYDN QLEGAIPASI GQMASLEVVR
0401: AGGNKNLQGA LPPEIGNCSN LTMLGLAETS ISGPLPATLG QLKSLDTIAI YTAMLSGPIP PELGQCSSLV NIYLYENALS GSIPPQLGKL SNLKNLLLWQ
0501: NNLVGVIPPE LGACSGLTVL DLSMNGLTGH IPSSLGNLTS LQELQLSVNK VSGPIPAELA RCTNLTDLEL DNNQISGAIP AEIGKLTALR MLYLWANQLT
0601: GSIPPEIGGC ASLESLDLSQ NALTGPIPRS LFRLPRLSKL LLIDNTLSGE IPPEIGNCTS LVRFRASGNH LAGVIPPEVG KLGSLSFFDL SSNRLSGAIP
0701: AEIAGCRNLT FVDLHGNAIA GVLPPGLFHD MLSLQYLDLS YNSIGGAIPS DIGKLGSLTK LVLGGNRLTG QIPPEIGSCS RLQLLDLGGN TLSGAIPASI
0801: GKIPGLEIAL NLSCNGLSGA IPKEFGGLVR LGVLDVSHNQ LSGDLQPLSA LQNLVALNIS FNDFTGRAPA TAFFAKLPTS DVEGNPGLCL SRCPGDASER
0901: ERAARRAARV ATAVLVSALA ALLAAAAFLL VGRRRRSSSL FGGARSDEDG KDAEMLPPWD VTLYQKLEIS VGDVARSLTP ANVIGQGWSG SVYRASVPST
1001: GAAIAVKRFR SCDEASAEAF ACEVGVLPRV RHRNIVRLLG WAANRRTRLL FYDYLPNGTL GGLLHSGCGG GGSTGGAVVV EWEVRLSIAV GVAEGLAYLH
1101: HDCVPAILHR DVKADNILLG ERYEACLADF GLARVAEDGA NSSPPPFAGS YGYIAPEYGC MTKITTKSDV YSFGVVLLEA ITGRRPVEAA FGEGRSVVQW
1201: VREHLHQKRD PAEVIDQRLQ GRPDTQVQEM LQALGIALLC ASARPEDRPT MKDVAALLRG LRNDNDGGAE ARKVSGGGGG GARPLDSARW AAAASSPAQA
1301: QSQSTSSSLA YSV
Best Arabidopsis Sequence Match ( AT5G56040.2 )
(BLAST)
0001: MPRNPRFCFF LFLLFHSSLF FSIPCFSIDE QGLALLSWKS QLNISGDALS SWKASESNPC QWVGIKCNER GQVSEIQLQV MDFQGPLPAT NLRQIKSLTL
0101: LSLTSVNLTG SIPKELGDLS ELEVLDLADN SLSGEIPVDI FKLKKLKILS LNTNNLEGVI PSELGNLVNL IELTLFDNKL AGEIPRTIGE LKNLEIFRAG
0201: GNKNLRGELP WEIGNCESLV TLGLAETSLS GRLPASIGNL KKVQTIALYT SLLSGPIPDE IGNCTELQNL YLYQNSISGS IPVSMGRLKK LQSLLLWQNN
0301: LVGKIPTELG TCPELFLVDL SENLLTGNIP RSFGNLPNLQ ELQLSVNQLS GTIPEELANC TKLTHLEIDN NQISGEIPPL IGKLTSLTMF FAWQNQLTGI
0401: IPESLSQCQE LQAIDLSYNN LSGSIPNGIF EIRNLTKLLL LSNYLSGFIP PDIGNCTNLY RLRLNGNRLA GNIPAEIGNL KNLNFIDISE NRLIGNIPPE
0501: ISGCTSLEFV DLHSNGLTGG LPGTLPKSLQ FIDLSDNSLT GSLPTGIGSL TELTKLNLAK NRFSGEIPRE ISSCRSLQLL NLGDNGFTGE IPNELGRIPS
0601: LAISLNLSCN HFTGEIPSRF SSLTNLGTLD VSHNKLAGNL NVLADLQNLV SLNISFNEFS GELPNTLFFR KLPLSVLESN KGLFISTRPE NGIQTRHRSA
0701: VKVTMSILVA ASVVLVLMAV YTLVKAQRIT GKQEELDSWE VTLYQKLDFS IDDIVKNLTS ANVIGTGSSG VVYRVTIPSG ETLAVKKMWS KEENRAFNSE
0801: INTLGSIRHR NIIRLLGWCS NRNLKLLFYD YLPNGSLSSL LHGAGKGSGG ADWEARYDVV LGVAHALAYL HHDCLPPILH GDVKAMNVLL GSRFESYLAD
0901: FGLAKIVSGE GVTDGDSSKL SNRPPLAGSY GYMAPEHASM QHITEKSDVY SYGVVLLEVL TGKHPLDPDL PGGAHLVQWV RDHLAGKKDP REILDPRLRG
1001: RADPIMHEML QTLAVSFLCV SNKASDRPMM KDIVAMLKEI RQFDMDRSES DMIKGGKCEK WQPQPLPPEK IVSTPRGSSN CSFAYSDESV
Arabidopsis Description
Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6B8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.