Factsheet for VIT_17s0000g08900.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046807	Potato	plasma membrane	75.74	74.44
Solyc03g112580.2.1	Tomato	plasma membrane	75.09	73.94
KRH03251	Soybean	plasma membrane	71.97	69.79
KRH57106	Soybean	plasma membrane	65.99	65.04
TraesCS3A01G092300.1	Wheat	plasma membrane	60.02	58.94
TraesCS3D01G092600.1	Wheat	plasma membrane	60.11	58.81
TraesCS3B01G107600.1	Wheat	plasma membrane	60.02	58.67
Os05t0169600-01	Rice	cytosol	12.13	58.67
HORVU1Hr1G025040.1	Barley	plasma membrane	60.02	58.41
Os01t0170300-01	Rice	extracellular	59.93	58.37
TraesCS1A01G113800.1	Wheat	plasma membrane	59.38	58.25
TraesCS1D01G115400.1	Wheat	plasma membrane	59.28	58.21
Zm00001d008715_P001	Maize	plasma membrane	59.38	57.89
Zm00001d037672_P001	Maize	plasma membrane	58.82	57.45
TraesCS1B01G134100.1	Wheat	plasma membrane	59.01	57.42
GSMUA_Achr3P20720_001	Banana	plasma membrane	45.77	57.37
EES17789	Sorghum	plasma membrane	59.47	57.26
VIT_19s0015g01120.t01	Wine grape	plasma membrane	51.93	55.28
GSMUA_Achr10P...	Banana	plasma membrane	47.24	53.1
EES02390	Sorghum	plasma membrane, plastid	60.29	49.96
VIT_05s0051g00540.t01	Wine grape	plasma membrane	49.08	46.8
HORVU3Hr1G016360.2	Barley	extracellular	41.36	45.73
VIT_07s0005g05420.t01	Wine grape	plasma membrane	40.53	45.14
VIT_18s0001g15720.t01	Wine grape	plasma membrane	44.85	44.85
VIT_18s0001g02590.t01	Wine grape	plastid	38.14	44.29
VIT_05s0051g00460.t01	Wine grape	plasma membrane	37.59	37.01
VIT_18s0001g14610.t01	Wine grape	plasma membrane	32.72	36.33
VIT_12s0035g00990.t01	Wine grape	plasma membrane	32.35	36.07
VIT_19s0027g00010.t01	Wine grape	plasma membrane	36.58	35.82
VIT_01s0010g00330.t01	Wine grape	plasma membrane	32.26	35.53
VIT_00s1353g00010.t01	Wine grape	plasma membrane	32.72	35.0
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	32.63	34.2
VIT_04s0008g03240.t01	Wine grape	plasma membrane	30.06	33.82
VIT_09s0018g01900.t01	Wine grape	plasma membrane	30.79	33.2
VIT_11s0149g00090.t01	Wine grape	plasma membrane	27.21	30.45
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	29.6	30.38
VIT_01s0010g00380.t01	Wine grape	plasma membrane	34.65	30.06
VIT_07s0005g04390.t01	Wine grape	plasma membrane	28.95	22.21

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262226	wikigene:100262226	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20
Gene3D:3.80.10.10	EMBL:AM475403	ProteinID:CAN61920	ProteinID:CAN61920.1	ProteinID:CCB42957	ProteinID:CCB42957.1
UniProt:F6GSJ2	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100262226	wikigene:LOC100262226	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00015C8B29	ArrayExpress:VIT_17s0000g08900	EnsemblPlantsGene:VIT_17s0000g08900
EnsemblPlants:VIT_17s0000g08900.t01	unigene:Vvi.20323	unigene:Vvi.22856	RefSeq:XP_003634262	RefSeq:XP_003634262.1	SEG:seg

Description

No Description!

Coordinates

chr17:-:10369954..10374428

Molecular Weight (calculated)

117633.0 Da

IEP (calculated)

5.391

GRAVY (calculated)

0.006

Length

1088 amino acids

Sequence
(BLAST)

0001: MASAINQQGQ ALLWWKGSLK EAPEALSNWD QSNETPCGWF GISCNSDNLV VELNLRYVDL FGPLPSNFSS LTSLNKLVLT GTNLTGSIPK EIGVLQDLNY
0101: LDLSDNALTG EIPSEVCSLL KLEQLYLNSN WLEGSIPVQL GNLTSLTWLI LYDNQLSGAI PSSIGNLKKL EVIRAGGNKN LEGPLPQEIG NCTNLAMIGL
0201: AETSMSGFLP PSLGRLKKLQ TLAIYTALLS GPIPPELGDC TELQNIYLYE NALTGSIPAR LGSLRNLQNL LLWQNNLVGT IPPELGNCKQ LVVIDISMNS
0301: ISGRVPQTFG NLSFLQELQL SVNQISGQIP AQIGNCLGLT HIELDNNKIT GTIPSSIGGL VNLTLLYLWQ NMLEGNIPES ISNCRSLEAV DFSENSLTGP
0401: IPKGIFQLKK LNKLLLLSNN LAGEIPPEIG ECSSLIRLRA SDNKLAGSIP PQIGNLKNLN FLDLALNRLT GVIPQEISGC QNLTFLDLHS NSIAGNLPEN
0501: LNQLVSLQFV DVSDNLIEGT LSPSLGSLSS LTKLILRKNR LSGLIPSELN SCAKLVLLDL SSNDLTGKIP SSVGEIPALE IALNLSWNKL SGKIPSEFTD
0601: LDKLGILDLS HNQLSGDLQP LFDLQNLVVL NISYNNFSGR VPDTPFFSKL PLSVLAGNPA LCLSGDQCAA DKRGGAARHA AAARVAMVVL LCAACALLLA
0701: ALYIILGNKM NPRGPGGPHQ CDGDSDVEMA PPWELTLYQK LDLSIADVVR CLTVANVVGR GRSGVVYRAN TPSGLTIAVK RFRSSEKFSA AAFSSEIATL
0801: ARIRHRNIVR LLGWAANRKT KLLFYDYLPS GTLGTLLHEC NSAIVEWESR FNIALGVAEG LAYLHHDCVP PIIHRDVKAH NILLGDRYEA CLADFGLARL
0901: VEDDDGNGSF SANPQFAGSY GYIAPEYACM LKITEKSDVY SFGVVLLEII TGKKPVDPSF PDGQHVIQWV REQLKSKRDP VQILDPKLQG HPDTQIQEML
1001: QALGISLLCT SNRAEDRPTM KDVAVLLREI RHEPSTGTEP HKPNSNGSKK PEAPAYSSQL LLLQGSSQYS LAYSSSSAGY NVNNDASV

Best Arabidopsis Sequence Match ( AT5G56040.2 )
(BLAST)

0001: MPRNPRFCFF LFLLFHSSLF FSIPCFSIDE QGLALLSWKS QLNISGDALS SWKASESNPC QWVGIKCNER GQVSEIQLQV MDFQGPLPAT NLRQIKSLTL
0101: LSLTSVNLTG SIPKELGDLS ELEVLDLADN SLSGEIPVDI FKLKKLKILS LNTNNLEGVI PSELGNLVNL IELTLFDNKL AGEIPRTIGE LKNLEIFRAG
0201: GNKNLRGELP WEIGNCESLV TLGLAETSLS GRLPASIGNL KKVQTIALYT SLLSGPIPDE IGNCTELQNL YLYQNSISGS IPVSMGRLKK LQSLLLWQNN
0301: LVGKIPTELG TCPELFLVDL SENLLTGNIP RSFGNLPNLQ ELQLSVNQLS GTIPEELANC TKLTHLEIDN NQISGEIPPL IGKLTSLTMF FAWQNQLTGI
0401: IPESLSQCQE LQAIDLSYNN LSGSIPNGIF EIRNLTKLLL LSNYLSGFIP PDIGNCTNLY RLRLNGNRLA GNIPAEIGNL KNLNFIDISE NRLIGNIPPE
0501: ISGCTSLEFV DLHSNGLTGG LPGTLPKSLQ FIDLSDNSLT GSLPTGIGSL TELTKLNLAK NRFSGEIPRE ISSCRSLQLL NLGDNGFTGE IPNELGRIPS
0601: LAISLNLSCN HFTGEIPSRF SSLTNLGTLD VSHNKLAGNL NVLADLQNLV SLNISFNEFS GELPNTLFFR KLPLSVLESN KGLFISTRPE NGIQTRHRSA
0701: VKVTMSILVA ASVVLVLMAV YTLVKAQRIT GKQEELDSWE VTLYQKLDFS IDDIVKNLTS ANVIGTGSSG VVYRVTIPSG ETLAVKKMWS KEENRAFNSE
0801: INTLGSIRHR NIIRLLGWCS NRNLKLLFYD YLPNGSLSSL LHGAGKGSGG ADWEARYDVV LGVAHALAYL HHDCLPPILH GDVKAMNVLL GSRFESYLAD
0901: FGLAKIVSGE GVTDGDSSKL SNRPPLAGSY GYMAPEHASM QHITEKSDVY SYGVVLLEVL TGKHPLDPDL PGGAHLVQWV RDHLAGKKDP REILDPRLRG
1001: RADPIMHEML QTLAVSFLCV SNKASDRPMM KDIVAMLKEI RQFDMDRSES DMIKGGKCEK WQPQPLPPEK IVSTPRGSSN CSFAYSDESV

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4K6B8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.