Factsheet for VIT_01s0010g00380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58543	Soybean	plasma membrane	70.49	69.55
PGSC0003DMT400059346	Potato	plasma membrane	65.95	65.9
KRH12156	Soybean	plasma membrane	65.39	65.23
Bra013446.1-P	Field mustard	mitochondrion	56.22	65.16
KRH37162	Soybean	plasma membrane	64.99	64.84
AT4G20140.1	Thale cress	plasma membrane	63.56	63.81
Bra039525.1-P	Field mustard	plasma membrane	59.97	60.5
CDY14942	Canola	plasma membrane	59.81	60.34
CDX96976	Canola	plasma membrane	59.17	59.69
Bra025113.1-P	Field mustard	plasma membrane	58.37	59.03
EER97238	Sorghum	plasma membrane	54.39	54.26
TraesCS2D01G233800.1	Wheat	plasma membrane	54.15	53.68
Zm00001d021535_P001	Maize	mitochondrion, plasma membrane	53.59	53.33
TraesCS2B01G251700.1	Wheat	plasma membrane	53.67	53.2
VIT_18s0001g02590.t01	Wine grape	plastid	28.31	37.89
VIT_19s0027g00010.t01	Wine grape	plasma membrane	32.3	36.45
VIT_05s0051g00460.t01	Wine grape	plasma membrane	31.9	36.2
VIT_01s0010g00330.t01	Wine grape	plasma membrane	28.39	36.03
VIT_00s1353g00010.t01	Wine grape	plasma membrane	28.55	35.2
VIT_18s0001g14610.t01	Wine grape	plasma membrane	27.19	34.8
VIT_17s0000g08900.t01	Wine grape	plasma membrane	30.06	34.65
VIT_09s0018g01900.t01	Wine grape	plasma membrane	27.83	34.59
VIT_12s0035g00990.t01	Wine grape	plasma membrane	26.79	34.43
VIT_05s0051g00540.t01	Wine grape	plasma membrane	30.86	33.92
VIT_18s0001g15720.t01	Wine grape	plasma membrane	29.35	33.82
VIT_19s0015g01120.t01	Wine grape	plasma membrane	27.35	33.56
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	26.95	32.56
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	27.43	32.45
VIT_07s0005g05420.t01	Wine grape	plasma membrane	25.2	32.34
VIT_04s0008g03240.t01	Wine grape	plasma membrane	24.8	32.16
VIT_11s0149g00090.t01	Wine grape	plasma membrane	22.97	29.63
VIT_07s0005g04390.t01	Wine grape	plasma membrane	24.08	21.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250573	wikigene:100250573	EntrezGene:100254655	wikigene:100254655	MapMan:11.10.1.4.2
MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:CCB51143	ProteinID:CCB51143.1	ncoils:Coil
UniProt:F6HGE2	EMBL:FN595754	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250573	wikigene:LOC100250573	EntrezGene:LOC100254655	wikigene:LOC100254655
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560
PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF426	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002108D91	ArrayExpress:VIT_01s0010g00380	EnsemblPlantsGene:VIT_01s0010g00380	EnsemblPlants:VIT_01s0010g00380.t01	RefSeq:XP_002265191	RefSeq:XP_002265191.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:14955665..14959548

Molecular Weight (calculated)

137390.0 Da

IEP (calculated)

6.337

GRAVY (calculated)

-0.009

Length

1254 amino acids

Sequence
(BLAST)

0001: MAMLKRIVWV TVIVALMCLS SGYYVLCKEE EETLRILLEI KESFEEDPQN VLDEWSVDNP SFCSWRRVSC SDGYPVHQVV ALNLSQSSLA GSISPSLARL
0101: TNLLHLDLSS NRLTGSIPPN LSNLSSLLSL LLFSNQLSGS IPAQLSSLTN LRVMRIGDNA LSGSIPPSFG NLLNLVTLGL ASSLLTGPIP WQLGRLTRLE
0201: NLILQQNKLE GPIPPDLGNC SSLVVFTSAL NRLNGSIPPE LALLKNLQLL NLANNTLSGA IPGQLGESTQ LVYLNLMANQ LEGPIPRSLA RLGSLQTLDL
0301: SVNKLTGQIP PELGNMGQLV YMVLSTNHLS GVIPRNICSN TTTMEHLFLS ENQISGEIPA DLGLCGSLKQ LNLANNTING SIPAQLFKLP YLTDLLLNNN
0401: SLVGSISPSI ANLSNLQTLA LYQNNLRGNL PREIGMLGKL EILYIYDNRL SGEIPLEIGN CSSLQRIDFF GNHFKGQIPV TIGRLKELNF LHLRQNDLSG
0501: EIPPTLGNCH QLTILDLADN SLSGGIPATF GFLRVLEELM LYNNSLEGNL PDELINVANL TRVNLSNNKL NGSIAALCSS HSFLSFDVTN NAFDGQIPRE
0601: LGFSPSLQRL RLGNNHFTGA IPRTLGEIYQ LSLVDFSGNS LTGSVPAELS LCKKLTHIDL NSNFLSGPIP SWLGSLPNLG ELKLSFNLFS GPLPHELFKC
0701: SNLLVLSLDN NLLNGTLPLE TGNLASLNVL NLNQNQFYGP IPPAIGNLSK LYELRLSRNS FNGEIPIELG ELQNLQSVLD LSYNNLTGEI PPSIGTLSKL
0801: EALDLSHNQL VGEIPFQVGA MSSLGKLNFS YNNLEGKLDK EFLHWPAETF MGNLRLCGGP LVRCNSEESS HHNSGLKLSY VVIISAFSTI AAIVLLMIGV
0901: ALFLKGKRES LNAVKCVYSS SSSIVHRRPL LPNTAGKRDF KWGDIMQATN NLSDNFIIGS GGSGTIYKAE LSSEETVAVK KILRKDDLLL NKSFEREIRT
1001: LGRVRHRHLA KLLGCCVNKE AGFNLLVYEY MENGSLWDWL HPESVSSKKR KSLDWEARLR VAVGLAKGVE YLHHDCVPKI IHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKTLV ENHNSFNTDS NSWFAGSYGY IAPEYAYSLK ATEKSDVYSL GIVLVELVSG KMPTDEIFGT DMNMVRWVES HIEMGQSSRT ELIDSALKPI
1201: LPDEECAAFG VLEIALQCTK TTPAERPSSR QVCDSLVHLS NNRNRMVDCH KNPH

Best Arabidopsis Sequence Match ( AT4G20140.1 )
(BLAST)

0001: MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL

Arabidopsis Description

GSO1LRR receptor-like serine/threonine-protein kinase GSO1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGQ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.