Factsheet for VIT_16s0013g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plasma membrane, nucleus

Predictor Summary:

nucleus 3
vacuole 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048524	Potato	plasma membrane	71.0	72.61
Solyc03g093330.2.1	Tomato	vacuole	68.59	72.51
KRH23822	Soybean	plasma membrane	69.08	70.16
PGSC0003DMT400018675	Potato	plasma membrane	68.4	69.74
Solyc05g051640.2.1	Tomato	plasma membrane	67.82	69.57
KRH39953	Soybean	plasma membrane	68.79	69.32
CDY23065	Canola	plasma membrane	61.56	62.89
CDY02141	Canola	plasma membrane	53.95	62.85
Bra012952.1-P	Field mustard	plasma membrane	61.27	62.6
AT5G61480.1	Thale cress	plasma membrane	62.04	61.86
GSMUA_Achr4P04790_001	Banana	plasma membrane	49.61	61.46
Zm00001d049588_P001	Maize	plasma membrane	49.81	50.59
TraesCS7A01G305700.1	Wheat	plastid	50.96	49.3
EES13340	Sorghum	plastid	49.52	49.19
HORVU7Hr1G072690.1	Barley	plastid	50.58	49.07
TraesCS7D01G302400.1	Wheat	plastid	50.48	48.79
TraesCS7B01G205900.1	Wheat	plastid	50.48	48.79
VIT_11s0149g00090.t01	Wine grape	plasma membrane	38.54	41.15
VIT_01s0010g00330.t01	Wine grape	plasma membrane	39.02	40.99
VIT_12s0035g00990.t01	Wine grape	plasma membrane	38.44	40.88
VIT_00s1353g00010.t01	Wine grape	plasma membrane	39.79	40.61
VIT_18s0001g14610.t01	Wine grape	plasma membrane	38.15	40.41
VIT_18s0001g02590.t01	Wine grape	plastid	31.02	34.37
VIT_05s0051g00460.t01	Wine grape	plasma membrane	36.22	34.03
VIT_18s0001g15720.t01	Wine grape	plasma membrane	35.45	33.82
VIT_07s0005g05420.t01	Wine grape	plasma membrane	31.31	33.27
VIT_04s0008g03240.t01	Wine grape	plasma membrane	30.73	32.99
VIT_17s0000g08900.t01	Wine grape	plasma membrane	34.2	32.63
VIT_19s0027g00010.t01	Wine grape	plasma membrane	34.3	32.04
VIT_05s0051g00540.t01	Wine grape	plasma membrane	35.07	31.9
VIT_09s0018g01900.t01	Wine grape	plasma membrane	30.92	31.81
VIT_19s0015g01120.t01	Wine grape	plasma membrane	31.21	31.7
VIT_07s0005g04390.t01	Wine grape	plasma membrane	39.5	28.91
VIT_01s0010g00380.t01	Wine grape	plasma membrane	32.56	26.95
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	26.88	26.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266344	wikigene:100266344	MapMan:11.10.1.9.2	MapMan:18.4.1.11	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CCB61260	ProteinID:CCB61260.1	UniProt:F6I2U3	EMBL:FN596738	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791
GO:GO:0009987	GO:GO:0010067	GO:GO:0010087	GO:GO:0010089	GO:GO:0010223	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051301	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266344	wikigene:LOC100266344	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF1
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000210A829	ArrayExpress:VIT_16s0013g01990	EnsemblPlantsGene:VIT_16s0013g01990	EnsemblPlants:VIT_16s0013g01990.t01
unigene:Vvi.15569	RefSeq:XP_002268598	RefSeq:XP_002268598.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:-:9543785..9549773

Molecular Weight (calculated)

113533.0 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.026

Length

1038 amino acids

Sequence
(BLAST)

0001: MMDHRGVSII INRMMEHSPL DFPLSNSILQ IKIIGITLVF SAPLPLQLIS LLALKSSLKD PLSTLHGWDP TPSLSTPAFH RPLWCSWSGV KCDPKTSHVT
0101: SLDLSRRNLS GTIPPEIRYL STLNHLNLSG NAFDGPFPPS VFELPNLRAL DISHNNFNSS FPPGLSKIKF LRLLDAYSNS FTGPLPQDII QLRYLEFLNL
0201: GGSYFEGSIP AIYGNFPRLK FLHLAGNALD GPIPPELGLN AQLQRLEIGY NAFYGGVPMQ FALLSNLKYL DISTANLSGP LPAHLGNMTM LQTLLLFSNH
0301: FWGEIPVSYA RLTALKSLDL SNNQLTGSIP EQFTSLKELT ILSLMNNELA GEIPQGIGDL PNLDTLSLWN NSLTGTLPQN LGSNAKLMKL DVSSNFLTGS
0401: IPLNLCLGNH LIKLILFGNR LVSELPNSLA NCTSLMRFRV QGNQLNGSIP YGFGQMPNLT YMDLSKNKFS GEIPEDFGNA AKLEYLNISE NAFDSQLPDN
0501: IWRAPSLQIF SASSSNIRGK IPDFIGCRSL YKIELQGNEL NGSIPWDIGH CMKLLSLNLR DNSLTGIIPW EISTLPSITD VDLSHNFLTG TIPSNFDNCS
0601: TLESFNVSFN LLTGPIPSSG TIFPNLHPSS FTGNVDLCGG VVSKPCAAGT EAATAEDVRQ QPKKTAGAIV WIMAAAFGIG LFVLIAGSRC FRANYSRGIS
0701: GEREMGPWKL TAFQRLNFSA DDVVECISMT DKIIGMGSTG TVYKAEMRGG EMIAVKKLWG KQKETVRKRR GVVAEVDVLG NVRHRNIVRL LGWCSNSDST
0801: MLLYEYMPNG SLDDLLHGKN KGDNLVADWY TRYKIALGVA QGICYLHHDC DPVIVHRDLK PSNILLDADM EARVADFGVA KLIQCDESMS VIAGSYGYIA
0901: PEYAYTLQVD EKSDIYSYGV VLLEILSGKR SVEGEFGEGN SIVDWVRLKI KNKNGVDEVL DKNAGASCPS VREEMMLLLR VALLCTSRNP ADRPSMRDVV
1001: SMLQEAKPKR KLPASVGSGG AAAAAAATPL PQKQTVDC

Best Arabidopsis Sequence Match ( AT5G61480.1 )
(BLAST)

0001: MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV NGQNDAVWCS WSGVVCDNVT AQVISLDLSH RNLSGRIPIQ
0101: IRYLSSLLYL NLSGNSLEGS FPTSIFDLTK LTTLDISRNS FDSSFPPGIS KLKFLKVFNA FSNNFEGLLP SDVSRLRFLE ELNFGGSYFE GEIPAAYGGL
0201: QRLKFIHLAG NVLGGKLPPR LGLLTELQHM EIGYNHFNGN IPSEFALLSN LKYFDVSNCS LSGSLPQELG NLSNLETLFL FQNGFTGEIP ESYSNLKSLK
0301: LLDFSSNQLS GSIPSGFSTL KNLTWLSLIS NNLSGEVPEG IGELPELTTL FLWNNNFTGV LPHKLGSNGK LETMDVSNNS FTGTIPSSLC HGNKLYKLIL
0401: FSNMFEGELP KSLTRCESLW RFRSQNNRLN GTIPIGFGSL RNLTFVDLSN NRFTDQIPAD FATAPVLQYL NLSTNFFHRK LPENIWKAPN LQIFSASFSN
0501: LIGEIPNYVG CKSFYRIELQ GNSLNGTIPW DIGHCEKLLC LNLSQNHLNG IIPWEISTLP SIADVDLSHN LLTGTIPSDF GSSKTITTFN VSYNQLIGPI
0601: PSGSFAHLNP SFFSSNEGLC GDLVGKPCNS DRFNAGNADI DGHHKEERPK KTAGAIVWIL AAAIGVGFFV LVAATRCFQK SYGNRVDGGG RNGGDIGPWK
0701: LTAFQRLNFT ADDVVECLSK TDNILGMGST GTVYKAEMPN GEIIAVKKLW GKNKENGKIR RRKSGVLAEV DVLGNVRHRN IVRLLGCCTN RDCTMLLYEY
0801: MPNGSLDDLL HGGDKTMTAA AEWTALYQIA IGVAQGICYL HHDCDPVIVH RDLKPSNILL DADFEARVAD FGVAKLIQTD ESMSVVAGSY GYIAPEYAYT
0901: LQVDKKSDIY SYGVILLEII TGKRSVEPEF GEGNSIVDWV RSKLKTKEDV EEVLDKSMGR SCSLIREEMK QMLRIALLCT SRSPTDRPPM RDVLLILQEA
1001: KPKRKTVGDN VIVVGDVNDV NFEDVCSVDV GHDVKCQRIG V

Arabidopsis Description

TDRLeucine-rich repeat receptor-like protein kinase TDR [Source:UniProtKB/Swiss-Prot;Acc:Q9FII5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.