CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049588_P001	Maize	plasma membrane	86.79	88.75
HORVU7Hr1G072690.1	Barley	plastid	74.16	72.43
TraesCS7A01G305700.1	Wheat	plastid	74.26	72.32
TraesCS7D01G302400.1	Wheat	plastid	74.16	72.16
TraesCS7B01G205900.1	Wheat	plastid	73.97	71.97
GSMUA_Achr4P04790_001	Banana	plasma membrane	49.38	61.58
KRH23822	Soybean	plasma membrane	48.9	50.0
KRH39953	Soybean	plasma membrane	49.0	49.71
PGSC0003DMT400048524	Potato	plasma membrane	48.23	49.66
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	49.19	49.52
Solyc03g093330.2.1	Tomato	vacuole	46.41	49.39
PGSC0003DMT400018675	Potato	plasma membrane	47.56	48.82
Solyc05g051640.2.1	Tomato	plasma membrane	47.08	48.62
CDY23065	Canola	plasma membrane	47.08	48.43
Bra012952.1-P	Field mustard	plasma membrane	46.7	48.03
CDY02141	Canola	plasma membrane	40.57	47.59
AT5G61480.1	Thale cress	plasma membrane	46.99	47.17
EES06133	Sorghum	plasma membrane	45.07	45.2
EER92863	Sorghum	plasma membrane	42.49	42.73
EER97948	Sorghum	plasma membrane	39.9	40.45
KXG20897	Sorghum	plasma membrane	38.18	39.9
KXG39823	Sorghum	plasma membrane	37.13	38.76
EER93376	Sorghum	plasma membrane	38.18	38.74
EES20075	Sorghum	plasma membrane	36.65	36.48
OQU83191	Sorghum	plasma membrane	37.03	36.03
EER89985	Sorghum	plasma membrane	35.6	34.57
KXG35861	Sorghum	plastid	35.6	32.78
KXG34410	Sorghum	plasma membrane	34.83	32.67
EES15451	Sorghum	plasma membrane	33.88	32.21
EES17789	Sorghum	plasma membrane	34.55	31.95
EES10396	Sorghum	plasma membrane	35.12	31.31
KXG26669	Sorghum	plasma membrane	32.34	30.76
OQU80948	Sorghum	plasma membrane, plastid	30.43	29.86
KXG38677	Sorghum	plasma membrane	31.2	29.4
EER97238	Sorghum	plasma membrane	34.45	28.64
EES02390	Sorghum	plasma membrane, plastid	35.79	28.48
KXG25252	Sorghum	mitochondrion, plasma membrane	30.62	27.61

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	EntrezGene:8076559	UniProt:C5YGS4
EnsemblPlants:EES13340	ProteinID:EES13340	ProteinID:EES13340.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0001944
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791
GO:GO:0009987	GO:GO:0010067	GO:GO:0010087	GO:GO:0010089	GO:GO:0010223	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0051301
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	EnsemblPlantsGene:SORBI_3007G038000	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0001A8739E	RefSeq:XP_002443845.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:3706154..3710416

Molecular Weight (calculated)

109594.0 Da

IEP (calculated)

7.677

GRAVY (calculated)

0.085

Length

1045 amino acids

Sequence
(BLAST)

0001: MATTGISSPP RPLPLPLHGG LLLLLPLILT ITTAASSAPL PLLALLSLKS SLHDPSGALR PWTYAAAASA GATRSLAPPW CAWPGVSCDP ATGDIAALDL
0101: SRRNLSGAFS ATAARLLAPT LTSLNLSGNA FTGEFPAAAV FFQLRRLESL DVSHNFFNGT FPDGVDALGG SLAAFDAYSN CFVGPLPRGL GELRRLQLLN
0201: LGGSFFNGSV PAEIGQLRSL RFLNLAGNAL TGRLPSELGG LASLEQLEIG YNSYDGGVPA ELGNLTRLQY LDIAVANLSG PLPPELGDLA RLEKLFLFKN
0301: RLAGAIPPRW SRLRALQALD LSDNLLAGAI PAGLGDLANL TMLNLMSNFL SGPIPAAIGA LPSLEVLQLW NNSLTGRLPA SLGASGRLVR VDVSTNSLSG
0401: PIPPGMCTGN RLARLILFDN RFDSAIPASL ATCSSLWRVR LESNRLSGEI PVGFGAIRNL TYLDLSSNSL TGGIPADLVA SPSLEYINIS GNPVGGALPN
0501: VSWQAPNLQV FAASKCALGG VVPAFGAAGC SNLYRLELAG NDLTGAIPSD ISTCKRLVSL RLQHNQLTGE IPAELAALPS ITEIDLSWNE LTGVVPPGFA
0601: NCTTLETFDV SFNHLVTAGS PSASSSPGAS EGTTARRNAA MWVSAVAVAF AGMVVLAVTA RWLQWREDGT AAPGGGGSNG GGARARRRPN VVVGPWRMTA
0701: FQRLDFTADD VARCVEGSDG IIGAGSSGTV YRAKMPNGEV IAVKKLWRQP LAHKEGGGGG APVGPLKEPG DADGGGNRSK LAEVEVLGHL RHRNIVRLLG
0801: WCTDGEATLL LYEYMPNGSL DDLLHGGAAG GKAKAWRLDW DARHRIAVGV AQGVSYLHHD CVPAVAHRDL KPSNILLDAD MEARVADFGV AKALHAAAAP
0901: MSAVAGSYGY IAPEYTYTLK VDEKSDVYSF GVVLLEILTG RRSVEAEYGE GSNIVDWVRR KVAAGGAGDV MDAAAWTTAA DQQQTGGGAT AAARDEMALV
1001: LRVALLCTSR WPQERPPMRD VVSMLQEARR GRKQLLPKKQ QTKIN

Best Arabidopsis Sequence Match ( AT5G61480.1 )
(BLAST)

0001: MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV NGQNDAVWCS WSGVVCDNVT AQVISLDLSH RNLSGRIPIQ
0101: IRYLSSLLYL NLSGNSLEGS FPTSIFDLTK LTTLDISRNS FDSSFPPGIS KLKFLKVFNA FSNNFEGLLP SDVSRLRFLE ELNFGGSYFE GEIPAAYGGL
0201: QRLKFIHLAG NVLGGKLPPR LGLLTELQHM EIGYNHFNGN IPSEFALLSN LKYFDVSNCS LSGSLPQELG NLSNLETLFL FQNGFTGEIP ESYSNLKSLK
0301: LLDFSSNQLS GSIPSGFSTL KNLTWLSLIS NNLSGEVPEG IGELPELTTL FLWNNNFTGV LPHKLGSNGK LETMDVSNNS FTGTIPSSLC HGNKLYKLIL
0401: FSNMFEGELP KSLTRCESLW RFRSQNNRLN GTIPIGFGSL RNLTFVDLSN NRFTDQIPAD FATAPVLQYL NLSTNFFHRK LPENIWKAPN LQIFSASFSN
0501: LIGEIPNYVG CKSFYRIELQ GNSLNGTIPW DIGHCEKLLC LNLSQNHLNG IIPWEISTLP SIADVDLSHN LLTGTIPSDF GSSKTITTFN VSYNQLIGPI
0601: PSGSFAHLNP SFFSSNEGLC GDLVGKPCNS DRFNAGNADI DGHHKEERPK KTAGAIVWIL AAAIGVGFFV LVAATRCFQK SYGNRVDGGG RNGGDIGPWK
0701: LTAFQRLNFT ADDVVECLSK TDNILGMGST GTVYKAEMPN GEIIAVKKLW GKNKENGKIR RRKSGVLAEV DVLGNVRHRN IVRLLGCCTN RDCTMLLYEY
0801: MPNGSLDDLL HGGDKTMTAA AEWTALYQIA IGVAQGICYL HHDCDPVIVH RDLKPSNILL DADFEARVAD FGVAKLIQTD ESMSVVAGSY GYIAPEYAYT
0901: LQVDKKSDIY SYGVILLEII TGKRSVEPEF GEGNSIVDWV RSKLKTKEDV EEVLDKSMGR SCSLIREEMK QMLRIALLCT SRSPTDRPPM RDVLLILQEA
1001: KPKRKTVGDN VIVVGDVNDV NFEDVCSVDV GHDVKCQRIG V

Arabidopsis Description

TDRLeucine-rich repeat receptor-like protein kinase TDR [Source:UniProtKB/Swiss-Prot;Acc:Q9FII5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.