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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027645_P001 Maize plasma membrane 94.61 94.52
Zm00001d048390_P001 Maize plasma membrane 92.4 91.69
TraesCS4A01G409400.1 Wheat plasma membrane 85.37 85.78
TraesCS4B01G309300.1 Wheat plasma membrane 85.27 85.69
TraesCS4D01G307500.1 Wheat plasma membrane 85.18 85.59
HORVU4Hr1G079040.1 Barley plasma membrane 84.99 85.4
Os03t0145102-00 Rice plasma membrane 73.15 76.77
TraesCS5D01G517500.1 Wheat plasma membrane, vacuole 50.82 71.74
GSMUA_Achr11P... Banana plasma membrane 52.84 70.75
TraesCS5B01G517600.1 Wheat plasma membrane 50.72 67.91
EES06133 Sorghum plasma membrane 62.46 62.28
Solyc09g064520.2.1 Tomato plasma membrane 57.46 58.53
PGSC0003DMT400022119 Potato plasma membrane 57.65 58.27
KRG95745 Soybean plasma membrane 57.17 58.12
KRH32252 Soybean plasma membrane 56.69 58.03
PGSC0003DMT400010618 Potato plasma membrane 56.5 58.0
KRH67464 Soybean plasma membrane 56.88 57.6
KRH19626 Soybean nucleus, plasma membrane 53.9 57.49
AT4G28650.1 Thale cress plasma membrane 55.92 57.35
Solyc04g050170.2.1 Tomato plasma membrane 55.82 57.31
CDY35204 Canola plasma membrane 54.86 56.72
Bra011046.1-P Field mustard plasma membrane 55.34 56.59
KRH34124 Soybean mitochondrion, plasma membrane 56.3 56.58
KRG92719 Soybean mitochondrion, plasma membrane 55.82 56.2
CDY38373 Canola plasma membrane 51.3 55.41
CDY31136 Canola plasma membrane 53.8 54.8
Bra030734.1-P Field mustard plasma membrane 53.51 54.46
CDX97498 Canola plasma membrane 53.51 54.46
AT1G08590.1 Thale cress plasma membrane 53.03 53.55
EES13340 Sorghum plastid 42.73 42.49
EER93376 Sorghum plasma membrane 41.19 41.55
EER97948 Sorghum plasma membrane 40.33 40.64
KXG39823 Sorghum plasma membrane 38.88 40.36
VIT_07s0005g04390.t01 Wine grape plasma membrane 52.36 38.36
KXG20897 Sorghum plasma membrane 36.86 38.3
EES20075 Sorghum plasma membrane 38.69 38.29
OQU83191 Sorghum plasma membrane 38.59 37.34
EES15451 Sorghum plasma membrane 36.86 34.85
EER89985 Sorghum plasma membrane 35.32 34.11
EES17789 Sorghum plasma membrane 36.28 33.36
KXG34410 Sorghum plasma membrane 35.32 32.94
KXG26669 Sorghum plasma membrane 34.74 32.85
KXG35861 Sorghum plastid 35.71 32.69
EES10396 Sorghum plasma membrane 36.48 32.34
OQU80948 Sorghum plasma membrane, plastid 32.24 31.46
KXG38677 Sorghum plasma membrane 31.38 29.4
EES02390 Sorghum plasma membrane, plastid 36.28 28.71
EER97238 Sorghum plasma membrane 34.46 28.48
KXG25252 Sorghum mitochondrion, plasma membrane 30.9 27.7
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8080570UniProt:C5WY01
EnsemblPlants:EER92863ProteinID:EER92863ProteinID:EER92863.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF217InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3001G506100SUPFAM:SSF52047SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A82BB6RefSeq:XP_002465865.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:77428758..77432264
Molecular Weight (calculated)
110050.0 Da
IEP (calculated)
6.083
GRAVY (calculated)
0.129
Length
1039 amino acids
Sequence
(BLAST)
0001: MTSATPRLGS TLHLFFPLSF SLALLCCIAV CNAAADEAAA LLAIKASLVD PLGKLGGWNS ASASSHCTWD GVRCNARGVV TGLNLAGMNL SGTIPDDILG
0101: LTGLTSIVLQ SNAFEHELPL VLMSIPTLQE LDVSDNNFAG HFPAGVGALA SLTSLNASGN NFAGPLPADI GNATALETLD FRGGYFSGTI PKSYGKLKKL
0201: KFLGLSGNNL GGALPAELFE MSALEQLIIG YNEFTGAIPS AIGNLAKLQY LDLAIGKLEG PIPPELGRLS YLNTVYLYKN NIGGPIPKEI GNLTSLVMLD
0301: ISDNALTGTI PAELGQLANL QLLNLMCNRL KGGIPAAIGD LPKLEVLELW NNSLTGPLPP SLGSAQPLQW LDVSTNALSG PVPAGLCDSG NLTKLILFNN
0401: VFTGPIPAGL TACSSLVRVR AHNNRLNGTV PAGLGRLPRL QRLEVAGNEL SGEIPDDLAL STSLSFIDLS HNQLQSALPS NILSIRTLQT FAAADNELTG
0501: GVPDEIGDCP SLSALDLSSN RLSGAIPASL ASCQRLVSLN LRSNRFTGQI PGAIAMMSTL SVLDLSSNFF SGVIPSNFGS SPALEMLNLA YNNLTGPVPT
0601: TGLLRTINPD DLAGNPGLCG GVLPPCGATS LRASSSEASG FRRSHMKHIA AGWAIGISVL IAACGVVFLG KQVYQRWYVN GGCCDEAMEE DGSGAWPWRL
0701: TAFQRLSFTS AEVLACIKED NIVGMGGTGV VYRADMPRHH AVVAVKKLWR AAGCPEETAT VDGRQDVEAG GEFAAEVKLL GRLRHRNVVR MLGYVSNNLD
0801: TMVLYEYMVN GSLWEALHGR GKGKMLADWV SRYNVAAGVA AGLAYLHHDC RPPVIHRDVK SSNVLLDTNM DAKIADFGLA RVMARAHETV SVVAGSYGYI
0901: APEYGYTLKV DQKSDIYSFG VVLMELLTGR RPVEPEYGES QDIVGWIRER LRSNSGVEEL LDASVGGCVD HVREEMLLVL RIAVLCTAKS PKDRPTMRDV
1001: VTMLGEAKPR RKSSSATVAA TVVDKDKPVF TTSPDSSYL
Best Arabidopsis Sequence Match ( AT4G28650.1 )
(BLAST)
0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL
Arabidopsis Description
MIK1MDIS1-interacting receptor like kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0G7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.