Factsheet for PGSC0003DMT400022119

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g064520.2.1	Tomato	plasma membrane	95.04	95.78
GSMUA_Achr1P06510_001	Banana	cytosol	48.93	72.58
KRG95745	Soybean	plasma membrane	71.98	72.41
KRH67464	Soybean	plasma membrane	71.5	71.64
KRH32252	Soybean	plasma membrane	70.72	71.63
KRH19626	Soybean	nucleus, plasma membrane	67.12	70.84
CDY35204	Canola	plasma membrane	66.73	68.26
Bra011046.1-P	Field mustard	plasma membrane	66.93	67.72
AT4G28650.1	Thale cress	plasma membrane	66.63	67.62
CDY38373	Canola	plasma membrane	62.74	67.05
PGSC0003DMT400010618	Potato	plasma membrane	65.47	66.5
GSMUA_Achr2P04260_001	Banana	plasma membrane	48.93	63.91
GSMUA_Achr11P...	Banana	plasma membrane	48.15	63.79
Zm00001d014971_P001	Maize	plasma membrane	60.31	60.02
EES06133	Sorghum	plasma membrane	59.82	59.02
Os02t0111800-02	Rice	plasma membrane	59.53	58.85
TraesCS6A01G029100.1	Wheat	plasma membrane	58.66	58.66
TraesCS4D01G307500.1	Wheat	plasma membrane	58.95	58.61
HORVU6Hr1G005460.1	Barley	plasma membrane	58.66	58.37
HORVU4Hr1G079040.1	Barley	plasma membrane	58.66	58.32
TraesCS4B01G309300.1	Wheat	plasma membrane	58.66	58.32
TraesCS4A01G409400.1	Wheat	plasma membrane	58.66	58.32
TraesCS6D01G033300.1	Wheat	plasma membrane	58.37	58.31
TraesCS6B01G042000.1	Wheat	plasma membrane	58.37	58.25
EER92863	Sorghum	plasma membrane	58.27	57.65
Zm00001d027645_P001	Maize	plasma membrane	57.78	57.12
Zm00001d048390_P001	Maize	plasma membrane	58.07	57.02
TraesCS5D01G517500.1	Wheat	plasma membrane, vacuole	36.19	50.54
Os03t0145102-00	Rice	plasma membrane	46.69	48.48
TraesCS5B01G517600.1	Wheat	plasma membrane	36.28	48.07
VIT_07s0005g04390.t01	Wine grape	plasma membrane	65.18	47.25
PGSC0003DMT400048524	Potato	plasma membrane	44.36	44.93
PGSC0003DMT400018675	Potato	plasma membrane	43.19	43.61
PGSC0003DMT400043020	Potato	plasma membrane	40.76	41.0
PGSC0003DMT400016060	Potato	plasma membrane	37.94	40.62
PGSC0003DMT400025747	Potato	plasma membrane	38.72	40.53
PGSC0003DMT400078706	Potato	plasma membrane	39.69	40.12
PGSC0003DMT400064038	Potato	plasma membrane	37.84	38.94
PGSC0003DMT400030886	Potato	plasma membrane	34.73	37.23
PGSC0003DMT400063787	Potato	plasma membrane, plastid	35.02	34.19
PGSC0003DMT400030278	Potato	plasma membrane	36.77	34.12
PGSC0003DMT400043459	Potato	plasma membrane	36.09	33.82
PGSC0003DMT400064535	Potato	plasma membrane	35.02	33.09
PGSC0003DMT400046807	Potato	plasma membrane	35.6	33.06
PGSC0003DMT400040886	Potato	plasma membrane	36.28	33.04
PGSC0003DMT400059664	Potato	plasma membrane	34.53	32.93
PGSC0003DMT400079864	Potato	plasma membrane	35.31	32.73
PGSC0003DMT400057334	Potato	plasma membrane	33.07	31.39
PGSC0003DMT400076250	Potato	plasma membrane	37.55	31.38
PGSC0003DMT400023681	Potato	plasma membrane	32.98	30.71
PGSC0003DMT400008336	Potato	plasma membrane	33.07	30.49
PGSC0003DMT400076247	Potato	cytosol	5.06	30.06
PGSC0003DMT400008335	Potato	plasma membrane	32.39	29.55
PGSC0003DMT400059346	Potato	plasma membrane	32.39	26.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102592602	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010087	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0046777	GO:GO:0090406	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1AG84	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400008581
PGSC:PGSC0003DMG400008581	EnsemblPlants:PGSC0003DMT400022119	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002951266	RefSeq:XP_006355906.1
SEG:seg	:	:	:	:	:

Description

Receptor protein kinase CLAVATA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400008581]

Coordinates

chr9:+:46200605..46203783

Molecular Weight (calculated)

112460.0 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.030

Length

1028 amino acids

Sequence
(BLAST)

0001: MNLLTIFILF LFYYYSFFAN GVFAKVDLND EVSILLSIKE SLVDPLDHLR DWTVPNNAAA GNNRSIIVPC SWTGVECNSH GAVEKLDLSH MNLTGTVSND
0101: IQKLKSLTSL NLCCNEFSSP LPKSLSNLTA LRSIDVSQNY FVYDFPVGLG MSEALMYLNA SSNNFSGYLP EDIGNATLLE TLDFRGNFFE GSIPKSYRNL
0201: GKLKFLGLSG NNLTGYIPGE LGQLSSLETV VLGYNLFEGG IPAEFGNLTN LKYLDLAIGN LGGSIPSELG KLKLLDTIFL YKNKFEGKIP PEIGNMTSLQ
0301: LLDLSDNMLT GEIPAEIAEL KNLQLLNIMS NKLSGSVPPG IGGLTQLEVV ELWNNSLSGP LPSDLGRNSP LQWVDISSNS FTGPIPAGLC AKGNLTKLIM
0401: FNNAFSGPIP TGLSTCTSLV RVRMQNNLLS GTIPAGFGKL GKLQRLELAN NSLTGQIPSD LASSTSLSFI DFSRNHIQSS IPSFILAIPT LQNFIASDNK
0501: MTGEIPDQFQ DCPSLTVLDL STNHFTGDLP ASIASCEKLV TLNLRNNQLN GPIPRAISMM PTLAILDLSN NSLTGGIPEN FGNSPALEML NVSHNKLEGP
0601: VPENGMLRTI NPDDLIGNAG LCGGVLPPCS HNAAYTSKQK SLHAKHIITG WLTGVAALLL FLTAGLVARS LYKRWHENGS CFEPSFEMSR GEWPWRLMAF
0701: QRLGFTSNDI LACLKESNVI GMGATGVVYK AEMQRENMVV AVKKLWKSGT DIEMGHSDDL VGEVNVLGKL RHRNIVRLLG FLHNKRDAMI LYEYMQNGSL
0801: GEVLHGKQAA GRLLVDWVTR YNIALGVAQG LAYLHHYCHP PVIHRDVKSN NILLDANLEA RIADFGLART MLKKNETVSM VAGSYGYIAP EYGYTLKVDE
0901: KSDIYSYGVV LMELLTGKRP LDPEFGESVD IVEWFRMKIR DNKSLEEALD PHVGATQHVQ EEMLLVLRIA ILCIAKLPKD RPSMRDVLTM LEEAKPRRKS
1001: SSNSGDSHDA TTNKDKPIFS TSPVNGLL

Best Arabidopsis Sequence Match ( AT4G28650.1 )
(BLAST)

0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL

Arabidopsis Description

MIK1MDIS1-interacting receptor like kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0G7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.