Factsheet for PGSC0003DMT400008336

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082470.2.1	Tomato	plasma membrane	96.5	96.5
PGSC0003DMT400008335	Potato	plasma membrane	81.52	80.66
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	51.75	54.43
Os10t0155800-01	Rice	cytosol	33.0	48.61
TraesCS2B01G105800.1	Wheat	cytosol	25.02	48.44
OQU80948	Sorghum	plasma membrane, plastid	43.14	45.16
Zm00001d031427_P001	Maize	plasma membrane	43.59	44.67
TraesCS2D01G088000.1	Wheat	plasma membrane	45.29	43.95
KXG38677	Sorghum	plasma membrane	43.59	43.82
Zm00001d030323_P001	Maize	plasma membrane	43.41	43.8
TraesCS5A01G213500.1	Wheat	plasma membrane	45.02	43.77
TraesCS5D01G218500.1	Wheat	plasma membrane	44.75	43.54
HORVU2Hr1G014840.9	Barley	plasma membrane	45.02	43.46
TraesCS5B01G210300.1	Wheat	plasma membrane	44.39	43.19
HORVU5Hr1G062120.3	Barley	plastid	42.33	39.9
PGSC0003DMT400023681	Potato	plasma membrane	35.25	35.6
PGSC0003DMT400030278	Potato	plasma membrane	34.62	34.84
PGSC0003DMT400043459	Potato	plasma membrane	33.99	34.55
PGSC0003DMT400010618	Potato	plasma membrane	31.12	34.29
PGSC0003DMT400079864	Potato	plasma membrane	33.54	33.72
PGSC0003DMT400059664	Potato	plasma membrane	32.02	33.12
PGSC0003DMT400022119	Potato	plasma membrane	30.49	33.07
PGSC0003DMT400064535	Potato	plasma membrane	32.11	32.9
PGSC0003DMT400063787	Potato	plasma membrane, plastid	30.94	32.76
PGSC0003DMT400078706	Potato	plasma membrane	29.87	32.74
PGSC0003DMT400043020	Potato	plasma membrane	29.69	32.39
PGSC0003DMT400018675	Potato	plasma membrane	29.33	32.12
PGSC0003DMT400025747	Potato	plasma membrane	28.16	31.98
PGSC0003DMT400064038	Potato	plasma membrane	28.34	31.63
PGSC0003DMT400048524	Potato	plasma membrane	28.79	31.63
PGSC0003DMT400057334	Potato	plasma membrane	30.22	31.12
PGSC0003DMT400046807	Potato	plasma membrane	30.58	30.8
PGSC0003DMT400016060	Potato	plasma membrane	26.28	30.52
PGSC0003DMT400040886	Potato	plasma membrane	30.4	30.03
PGSC0003DMT400059346	Potato	plasma membrane	33.63	29.88
PGSC0003DMT400030886	Potato	plasma membrane	24.22	28.15
PGSC0003DMT400076250	Potato	plasma membrane	29.51	26.75
PGSC0003DMT400076247	Potato	cytosol	3.32	21.39

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102601817	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0ZUF0	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400003211	PGSC:PGSC0003DMG400003211	EnsemblPlants:PGSC0003DMT400008336
PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF249
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI000294FA74	RefSeq:XP_006347638.1	SEG:seg

Description

Leucine Rich Repeat family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003211]

Coordinates

chr3:+:47638367..47645642

Molecular Weight (calculated)

123410.0 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.079

Length

1115 amino acids

Sequence
(BLAST)

0001: MFLFDLVHCF IFFASIVAVF SESLPQDSVH LLGFRSNLPD PSQQLLPWNQ SVSHCKWKGV TCYSDKTSQV KSLYFRDFLL SGILDKAFPN LCHLPRLVSL
0101: DLSGNHLTGG IPAMLANCSQ LDTIFLNDNR FSGSIPPEIF KSKRLVYLEL GYNQLNGTIP SEVGLSTSLQ YLGLWNNFLS GNVPKELFGL PNLTDLYIHT
0201: NNLTGPLPDF PSSCSLSQLL IHQNRFSGSL PISLGNCHNL SAFYATSAHL GGVISPEVFR GLSNLELLSL DDNNFEGEIP ETLWNGKLQE LVLSINNFNG
0301: SISEKIGGCH QMTYIDLSAN KLSGQIPKSV GRLKNLYKLL LYDNMFSGSL PAEVGNCTSL AEISLVSNFI SGEIPSEICS LQNLETFNAF KNKIQGQIPE
0401: CIGRISGLQE LALYENRLTG KLPLGITNMT KLSFLSLAHN NLTGEVPPDL GKDNFPGLVK VDLGYNNFSG QIPSKLCNGN RLAVLALENN RFNGSFPTYL
0501: ANCKSLYRVK LPNNNLQGSI PDDIEKNENI SYLDVRQNML VGRIPAAFGY WTNLSMIDLS ENMFNGSIPT ELGKLQNLVK LSISSNRLTG QIPFQLSNSE
0601: KLEELDLSNN SLSGRIPKEI ASSSVLTNLL LQDNKLSGAL PSTFSSSQML VKLQLGNNLL EGPIPCSLSK LMQPGFSLNL SMNKFTGEIP RCLGNLDKLE
0701: VLDISSNNLS GAIPSEMEKM SSLSFLNISF NSLSGKVPNT WEKLLSSRPG SALGNPGLCL IDTEGSNCKH VKKSQVKWKT LAGVISGCVL SMAITVAAMY
0801: LLVTRIWHPS LLNKHRLVKC QSGIEDLPDG ITFEDIVHAT EGWSENYVIG RGTHGTVYKM ESAKSNKLWA VKKVDLAQRA FNDEMRSLNS VRHRNLVRLG
0901: GYCMKHGYGF ILTEFIPGGT LHDVLHQRKP PVVLDWKSRH RIALGIAQGL SYLHHDSVPQ IIHRDLKSDN VMLDSEMVPK IGDFGIAKMV SDEENSTNSN
1001: IVGTLGYIAP ENAYSVQLTE KSDVYSYGIL LLELFCRKMP VDPSFEEGLD IVFWVRKNLQ RSNNFLSFLD EEIRLWNVEE QWKALKLVDL ALQCAQLEAS
1101: TRPAMRDVVR SLVEL

Best Arabidopsis Sequence Match ( AT1G73080.1 )
(BLAST)

0001: MKNLGGLFKI LLLFFCLFLS THIISVSCLN SDGLTLLSLL KHLDRVPPQV TSTWKINASE ATPCNWFGIT CDDSKNVASL NFTRSRVSGQ LGPEIGELKS
0101: LQILDLSTNN FSGTIPSTLG NCTKLATLDL SENGFSDKIP DTLDSLKRLE VLYLYINFLT GELPESLFRI PKLQVLYLDY NNLTGPIPQS IGDAKELVEL
0201: SMYANQFSGN IPESIGNSSS LQILYLHRNK LVGSLPESLN LLGNLTTLFV GNNSLQGPVR FGSPNCKNLL TLDLSYNEFE GGVPPALGNC SSLDALVIVS
0301: GNLSGTIPSS LGMLKNLTIL NLSENRLSGS IPAELGNCSS LNLLKLNDNQ LVGGIPSALG KLRKLESLEL FENRFSGEIP IEIWKSQSLT QLLVYQNNLT
0401: GELPVEMTEM KKLKIATLFN NSFYGAIPPG LGVNSSLEEV DFIGNKLTGE IPPNLCHGRK LRILNLGSNL LHGTIPASIG HCKTIRRFIL RENNLSGLLP
0501: EFSQDHSLSF LDFNSNNFEG PIPGSLGSCK NLSSINLSRN RFTGQIPPQL GNLQNLGYMN LSRNLLEGSL PAQLSNCVSL ERFDVGFNSL NGSVPSNFSN
0601: WKGLTTLVLS ENRFSGGIPQ FLPELKKLST LQIARNAFGG EIPSSIGLIE DLIYDLDLSG NGLTGEIPAK LGDLIKLTRL NISNNNLTGS LSVLKGLTSL
0701: LHVDVSNNQF TGPIPDNLEG QLLSEPSSFS GNPNLCIPHS FSASNNSRSA LKYCKDQSKS RKSGLSTWQI VLIAVLSSLL VLVVVLALVF ICLRRRKGRP
0801: EKDAYVFTQE EGPSLLLNKV LAATDNLNEK YTIGRGAHGI VYRASLGSGK VYAVKRLVFA SHIRANQSMM REIDTIGKVR HRNLIKLEGF WLRKDDGLML
0901: YRYMPKGSLY DVLHGVSPKE NVLDWSARYN VALGVAHGLA YLHYDCHPPI VHRDIKPENI LMDSDLEPHI GDFGLARLLD DSTVSTATVT GTTGYIAPEN
1001: AFKTVRGRES DVYSYGVVLL ELVTRKRAVD KSFPESTDIV SWVRSALSSS NNNVEDMVTT IVDPILVDEL LDSSLREQVM QVTELALSCT QQDPAMRPTM
1101: RDAVKLLEDV KHLARSCSSD SVR

Arabidopsis Description

PEPR1Leucine-rich repeat receptor-like protein kinase PEPR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSL9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.