Factsheet for VIT_16s0098g01090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
plasma membrane 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008336	Potato	plasma membrane	54.43	51.75
Solyc03g082470.2.1	Tomato	plasma membrane	54.43	51.75
Solyc03g082450.2.1	Tomato	plasma membrane	52.92	50.31
PGSC0003DMT400008335	Potato	plasma membrane	52.55	49.42
Os10t0155800-01	Rice	cytosol	32.55	45.57
KXG38677	Sorghum	plasma membrane	44.15	42.2
TraesCS2B01G105800.1	Wheat	cytosol	22.74	41.84
Zm00001d030323_P001	Maize	plasma membrane	43.58	41.81
OQU80948	Sorghum	plasma membrane, plastid	41.7	41.5
Zm00001d031427_P001	Maize	plasma membrane	42.45	41.36
TraesCS5A01G213500.1	Wheat	plasma membrane	43.49	40.19
TraesCS5D01G218500.1	Wheat	plasma membrane	43.4	40.14
TraesCS5B01G210300.1	Wheat	plasma membrane	43.3	40.05
TraesCS2D01G088000.1	Wheat	plasma membrane	43.11	39.77
HORVU2Hr1G014840.9	Barley	plasma membrane	42.64	39.13
HORVU5Hr1G062120.3	Barley	plastid	43.21	38.72
VIT_09s0018g01900.t01	Wine grape	plasma membrane	30.94	32.51
VIT_04s0008g03240.t01	Wine grape	plasma membrane	28.21	30.92
VIT_19s0027g00010.t01	Wine grape	plasma membrane	31.98	30.51
VIT_05s0051g00460.t01	Wine grape	plasma membrane	31.13	29.86
VIT_01s0010g00330.t01	Wine grape	plasma membrane	27.83	29.86
VIT_17s0000g08900.t01	Wine grape	plasma membrane	30.38	29.6
VIT_18s0001g02590.t01	Wine grape	plastid	25.85	29.24
VIT_18s0001g14610.t01	Wine grape	plasma membrane	26.98	29.18
VIT_12s0035g00990.t01	Wine grape	plasma membrane	26.42	28.69
VIT_00s1353g00010.t01	Wine grape	plasma membrane	26.7	27.83
VIT_18s0001g15720.t01	Wine grape	plasma membrane	28.4	27.67
VIT_01s0010g00380.t01	Wine grape	plasma membrane	32.45	27.43
VIT_05s0051g00540.t01	Wine grape	plasma membrane	29.43	27.34
VIT_19s0015g01120.t01	Wine grape	plasma membrane	26.13	27.1
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	26.32	26.88
VIT_07s0005g05420.t01	Wine grape	plasma membrane	24.06	26.1
VIT_11s0149g00090.t01	Wine grape	plasma membrane	21.23	23.15
VIT_07s0005g04390.t01	Wine grape	plasma membrane	23.68	17.7

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ProteinID:CBI23072	ProteinID:CBI23072.3
UniProt:E0CVB1	EMBL:FN595247	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF249	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI0001BE200F
ArrayExpress:VIT_16s0098g01090	EnsemblPlantsGene:VIT_16s0098g01090	EnsemblPlants:VIT_16s0098g01090.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:21357596..21361386

Molecular Weight (calculated)

117387.0 Da

IEP (calculated)

6.753

GRAVY (calculated)

-0.090

Length

1060 amino acids

Sequence
(BLAST)

0001: MVLFFESKLK PSQFFIKKLQ KTTKFDTLNS FLYGFCHFLL LPIRSSAGIP TVSRMAVENH QQKAVAASHK HLLSLDLSIN NFTGGIPQLL GNCSRLSTIL
0101: LNDNGLQGSI PAQIFSKQLL ELNLGTNLLW GTIPSEVRLC RNLEYLGLYN NFLSGEIPRE LFSLPKLKFL YLNTNNLTGT LPNFPPSCAI SDLWIHENAL
0201: SGSLPHSLGN CRNLTMFFAS YNNFGGIIPP EIFKGLVQLE FLYLDSNKLE GQIPETLWGL GELKELVLSG NMLNGRIPER IAQCHQLAVL SLSTNNLVGQ
0301: IPPSIGSLKD LYFVSLSDNM LQGSLPPEVG NCSSLVELRL QNNLIEGRIP SEVCKLENLE VFHLFNNHIK GRIPQQIGRM SNLVELALYN NSLTGRIPSG
0401: ITHLKKLTFL SLADNNLTGE VPSEIGRNNS PGLVKLDLTG NRLYGLIPSY ICSGNSLSVL ALGNNSFNGT FPVELGKCSS LRRVILSYNL LQGSIPAELD
0501: KNPGISFLDA RGNLLEGSIP PVVGSWSNLS MLDLSENRLS GSIPPELGML GNLQMLLLSS NRLNGSIPPE LGYCSQMIKM DLSKNSLRGN IPSEITSFVA
0601: LQNLLLQDNN LSGVIPDSFS SLESLFDLQL GNNMLEGSIP CSLGKLHQLN SVLNLSHNML SGEIPRCLSG LDKLQILDLS SNNFSGTIPP ELNSMVSLSF
0701: VNISFNHLSG KIPDAWMKSM ASSPGSYLGN PELCLQGNAD RDSYCGEAKN SHTKGLVLVG IILTVAFFIA LLCAAIYITL DHRLRQQLSS QTRSPLHECR
0801: SKTEDLPEDL KLEDIIKATE GWNDRYVIGR GKHGTVYRTE TENSRRNWAV KKVDLSETNF SIEMRTLSLV RHRNVVRMAG YCIKDGYGFI VTEYMEGGTL
0901: FDVLHWRKPL HTNFPTPLIY KTDHQKLTSL NSLSSPRVPE NGHSTRLTEK CDVYSYGVIL LELLCRKLPV DPSFEEGLDI ASWTRKNLQE NNECCSFLDV
1001: EIGSWNVDEQ WKALKLLELA LDCTELEPGI RPSMRDVVGY LIKLNDKQEG TVHTRDNSGS

Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)

0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.